BAC Information

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BAC

Clone NameB6Ng01-021K23
Chromosome16 (Build37)
Map Location 6,425,422 - 6,426,445
singlet/doubletsinglet
Overlap geneA2bp1
Upstream geneLOC100042436, LOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-021K23.bB6Ng01-021K23.g
ACCDH854119DH854120
length1,022220
definitionDH854119|Mus musculus domesticus DNA, BAC clone: B6Ng01-021K23, 5' end.DH854120|Mus musculus domesticus DNA, BAC clone: B6Ng01-021K23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaggcatcagccatttgcctctggaagtcgcttcctggttgtcta
tagagagcgtaatggaaaggctgcagggtggtggcactatgtgataatac
actatggatgcaagataagtgctcacaggggtacacactaatgtagaaag
actacatcatggtagtagtactgtgaggatggattgtggatgcgagatgg
aatgtacaagctcacacaaacaagccatggaaccacaatggccaattttc
catctttctgtgtatcaaccacttgatgtgacttcaaaagaagtttcaag
taatggtaaatagaatgtatattcaggggttttctgcctttttctgatta
tctgcaggaatttcacatttcttcaatgtggattgactatggggtgatca
tcatacaatgattgacaatcctttgtaccctgtgtttaacattcttctat
tagcttgccataagcacaggtactagaccctagcagcaacccaatgtgcc
atgcactaccagtaacacaaaagttcccttgtctccagcacacaaggaca
tcaagagacatagaattcaaatctcaagctgcccagttgaggcaagagct
catttgcaaaatgcttgttttaccagcaactgagtaagagttcaatcccc
agagcccatgtaagaaaagctaaatgtggcactgtatatatttgtaatat
acactgtggggaggtagggacaggtgggtcactggggcttgctggccacc
cagccctcaccttatttggacagattaatgctcatgagctactatacatc
aaacatcaagatggctagtgactatgaataatgaggtcatcttctggtag
tctctacccacatgtgtatgaaatcacatgttcacctgggctagatagat
ccaagaacatctattctaaaatattaacatatcttgctagtttaatcata
taagtaacacaactttccttacactggcgaaagattatatgggtatatca
gaaattgctagggttttatctc
aatgaaggagaccctcaaacttagcagctgtaggggctttaagaattgcc
ttgaaggggccttgtcatttaggggaagagggtgaaagacattggttcag
aggggtaaggacctggtacccagtgttaactagagatggacaagagttgg
catatggccaagataggtagtagttagtaaagtttcatgggagggagagg
agatgatagaataagggggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_6425422_6426445
seq2: B6Ng01-021K23.b_45_1066 (reverse)

seq1  GAGATAATACCCTAGCCATTTTCTGATCTCCCCTTCTATTCTTTCAGCCA  50
      ||||||| ||||||| || |||||||| | ||| | || |||||| ||||
seq2  GAGATAAAACCCTAG-CAATTTCTGATATACCCATATAATCTTTC-GCCA  48

seq1  GTTGTAAGGAAAGTTGTGTTACTTATATGATTAAAACTAGC-AGATATGT  99
      | |||||||||||||||||||||||||||||| |||||||| ||||||||
seq2  G-TGTAAGGAAAGTTGTGTTACTTATATGATT-AAACTAGCAAGATATGT  96

seq1  TAATATTTTAGAATAGATGTTCTTGGATCTATCTAGCCCAGGTGTACATG  149
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  TAATATTTTAGAATAGATGTTCTTGGATCTATCTAGCCCAGGTGAACATG  146

seq1  TGATCTCATACACATGTGGGTAGAGACTACCAGAAGATGACCTCATTATT  199
      |||| |||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTTCATACACATGTGGGTAGAGACTACCAGAAGATGACCTCATTATT  196

seq1  CATTAGTCACTAGCCATCTTGATGTTTGATGTATAGTAGCTCATGAGCCT  249
      || ||||||||||||||||||||||||||||||||||||||||||||| |
seq2  CA-TAGTCACTAGCCATCTTGATGTTTGATGTATAGTAGCTCATGAGCAT  245

seq1  TAATCTGTCCAAAT-AGGTGA-GGCTGGGTGGCCAGCAAGCCCCAGTGAC  297
      |||||||||||||| |||||| ||||||||||||||||||||||||||||
seq2  TAATCTGTCCAAATAAGGTGAGGGCTGGGTGGCCAGCAAGCCCCAGTGAC  295

seq1  CCACCTGTCCCTACCTCCCCACAGTGTATATTACAAATATATACAGTGCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACCTGTCCCTACCTCCCCACAGTGTATATTACAAATATATACAGTGCC  345

seq1  ACATTTAGCTTTTCTTACATGGGCTCTGGGGATTGAACTCTTACTCAGTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATTTAGCTTTTCTTACATGGGCTCTGGGGATTGAACTCTTACTCAGTT  395

seq1  GCTGGTAAAACAAGCATTTTGCAAATGAGCTCTTGCCTCAACTGGGCAGC  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGTAAAACAAGCATTTTGCAAATGAGCTCTTGCCTCAACTGGGCAGC  445

seq1  TTGAGATTTGAATTCTATGTCTCTTGATGTCCTTGTGTGCTGGAGACAAG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAGATTTGAATTCTATGTCTCTTGATGTCCTTGTGTGCTGGAGACAAG  495

seq1  GGAACTTTTGTGTTACTGGTAGTGCATGGCACATTGGGTTGCTGCTAGGG  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAACTTTTGTGTTACTGGTAGTGCATGGCACATTGGGTTGCTGCTAGGG  545

seq1  TCTAGTACCTGTGCTTATGGCAAGCTAATAGAAGAATGTTAAACACAGGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTACCTGTGCTTATGGCAAGCTAATAGAAGAATGTTAAACACAGGG  595

seq1  TACAAAGGATTGTCAATCATTGTATGATGATCACCCCATAGTCAATCCAC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGGATTGTCAATCATTGTATGATGATCACCCCATAGTCAATCCAC  645

seq1  ATTGAAGAAATGTGAAATTCCTGCAGATAATCAGAAAAAGGCAGAAAACC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAGAAATGTGAAATTCCTGCAGATAATCAGAAAAAGGCAGAAAACC  695

seq1  CCTGAATATACATTCTATTTACCATTACTTGAAACTTCTTTTGAAGTCAC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGAATATACATTCTATTTACCATTACTTGAAACTTCTTTTGAAGTCAC  745

seq1  ATCAAGTGGTTGATACACAGAAAGATGGAAAATTGGCCATTGTGGTTCCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAGTGGTTGATACACAGAAAGATGGAAAATTGGCCATTGTGGTTCCA  795

seq1  TGGCTTGTTTGTGTGAGCTTGTACATTCCATCTCGCATCCACAATCCATC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTTGTTTGTGTGAGCTTGTACATTCCATCTCGCATCCACAATCCATC  845

seq1  CTCACAGTACTACTACCATGATGTAGTCTTTCTACATTAGTGTGTACCCC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACAGTACTACTACCATGATGTAGTCTTTCTACATTAGTGTGTACCCC  895

seq1  TGTGAGCACTTATCTTGCATCCATAGTGTATTATCACATAGTGCCACCAC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGAGCACTTATCTTGCATCCATAGTGTATTATCACATAGTGCCACCAC  945

seq1  CCTGCAGCCTTTCCATTACGCTCTCTATAGACAACCAGGAAGCGACTTCC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCAGCCTTTCCATTACGCTCTCTATAGACAACCAGGAAGCGACTTCC  995

seq1  AGAGGCAAATGGCTGATGCCTGAATTC  1024
      |||||||||||||||||||||||||||
seq2  AGAGGCAAATGGCTGATGCCTGAATTC  1022