BAC Information

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BAC

Clone NameB6Ng01-023J13
Chromosome16 (Build37)
Map Location 14,898,790 - 15,054,379
singlet/doubletdoublet
Overlap geneEfcab1, LOC100042737
Upstream genePdxdc1, Mpv17l, Ifitm7, 2900011O08Rik, 4921513D23Rik, Nde1, Myh11, 0610037P05Rik, Abcc1, Gm1758, Snai2
Downstream geneLOC665653, LOC385748, LOC100042743, LOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-023J13.bB6Ng01-023J13.g
ACCDH855472DH855473
length2271,106
definitionDH855472|Mus musculus domesticus DNA, BAC clone: B6Ng01-023J13, 5' end.DH855473|Mus musculus domesticus DNA, BAC clone: B6Ng01-023J13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,054,153 - 15,054,379)(14,898,790 - 14,899,896)
sequence
gaattccttatgtaattcttggagcttttcagagaaaaacctcaataagt
gttttgtaaaaaatgtagtgaagtaattaaagaaatatggattaatatcc
tgtgtaaagattctgccctgactaggagaaataccaagtgtggccttatt
ttacacgactggcatttggagatgctttaaagtgcagcagtgctgtggag
tgtagtaagtggggtgtggggcggatg
gaattctgcaggattagcttctagtgacatactatcaaggacacggacta
ataatatattaaactttattagcttagagagtgttgactacaataacaaa
aagacccaaagcaataaggtaggccatttacaaagagccaagatgcattt
tccagatctcagcatacacaaaccttattttccatccaagtcttctaata
tactctctaaaattaggactcaggtgccaggaaatagccttgttttgact
cctgggaaggagaaaaaggacattgcttattcacagggtggagaggcaca
actgcctcccaatctcttggttatttctactgatcaggctttctaaagct
gtgatctagctggttagatgtgtactcagctacatgaccataacaaaaaa
aagattttgagtaccagcaagtaattttgccttaattgcttacaaacaaa
tgtctattccaggaataagtactatgaattcacaattaaaaggagaacta
aaagatgcactgcttctctgatgtcccttgggctacactaatacacatga
tggatcagttgttgtggtccataaatagtagtgaaaaagctctatagcat
tagaacattggcatgtgaaaggggacataatctttacaaattcaatactt
gattgaagcccggctttacaactgcctggtttgtttgtggactaatccat
taactattctcaccatcttctttttctttaacaatcccaagatctcttca
ggaactatgatgagatgcctgttaaaagtatacaggaactcaaaaagcaa
atggtaatgttctctgaaccaatatggtgaggcacctaacaagtagctta
gtacttttctgatactgtagtcatgtcagatcatgggtccaggaatggag
tcatgtgagagaattctgagaaaactctaagaaaacatataaggtcttgt
gaccccagtttcttaaaaaagggaattgttctaagaatgtttcatgctcc
tcaaaggtaaagtggataggagtgagttttcttggattgctgaattatgc
ttgctgttggttacttatttatatctcaatgtgaaaaatgatgtcctttt
attatc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15054153_15054379
seq2: B6Ng01-023J13.b_42_268 (reverse)

seq1  CATCCGCCCCACACCCCACTTACTACACTCCACAGCACTGCTGCACTTTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATCCGCCCCACACCCCACTTACTACACTCCACAGCACTGCTGCACTTTA  50

seq1  AAGCATCTCCAAATGCCAGTCGTGTAAAATAAGGCCACACTTGGTATTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCATCTCCAAATGCCAGTCGTGTAAAATAAGGCCACACTTGGTATTTC  100

seq1  TCCTAGTCAGGGCAGAATCTTTACACAGGATATTAATCCATATTTCTTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAGTCAGGGCAGAATCTTTACACAGGATATTAATCCATATTTCTTTA  150

seq1  ATTACTTCACTACATTTTTTACAAAACACTTATTGAGGTTTTTCTCTGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACTTCACTACATTTTTTACAAAACACTTATTGAGGTTTTTCTCTGAA  200

seq1  AAGCTCCAAGAATTACATAAGGAATTC  227
      |||||||||||||||||||||||||||
seq2  AAGCTCCAAGAATTACATAAGGAATTC  227

seq1: chr16_14898790_14899896
seq2: B6Ng01-023J13.g_68_1173

seq1  GAATTCTGCAGGATTAGCTTCTAGTGACATACTATCAAGGACACGGACTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGCAGGATTAGCTTCTAGTGACATACTATCAAGGACACGGACTA  50

seq1  ATAATATATTAAACTTTATTAGCTTAGAGAGTGTTGACTACAATAACAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATATATTAAACTTTATTAGCTTAGAGAGTGTTGACTACAATAACAAA  100

seq1  AAGACCCAAAGCAATAAGGTAGGCCATTTACAAAGAGCCAAGATGCATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGACCCAAAGCAATAAGGTAGGCCATTTACAAAGAGCCAAGATGCATTT  150

seq1  TCCAGATCTCAGCATACACAAACCTTATTTTCCATCCAAGTCTTCTAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGATCTCAGCATACACAAACCTTATTTTCCATCCAAGTCTTCTAATA  200

seq1  TACTCTCTAAAATTAGGACTCAGGTGCCAGGAAATAGCCTTGTTTTGACT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTCTCTAAAATTAGGACTCAGGTGCCAGGAAATAGCCTTGTTTTGACT  250

seq1  CCTGGGAAGGAGAAAAAGGACATTGCTTATTCACAGGGTGGAGAGGCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGGGAAGGAGAAAAAGGACATTGCTTATTCACAGGGTGGAGAGGCACA  300

seq1  ACTGCCTCCCAATCTCTTGGTTATTTCTACTGATCAGGCTTTCTAAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTCCCAATCTCTTGGTTATTTCTACTGATCAGGCTTTCTAAAGCT  350

seq1  GTGATCTAGCTGGTTAGATGTGTACTCAGCTACATGACCATAACAAAAAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATCTAGCTGGTTAGATGTGTACTCAGCTACATGACCATAACAAAAAA  400

seq1  AAGATTTTGAGTACCAGCAAGTAATTTTGCCTTAATTGCTTACAAACAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTTGAGTACCAGCAAGTAATTTTGCCTTAATTGCTTACAAACAAA  450

seq1  TGTCTATTCCAGGAATAAGTACTATGAATTCACAATTAAAAGGAGAACTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTATTCCAGGAATAAGTACTATGAATTCACAATTAAAAGGAGAACTA  500

seq1  AAAGATGCACTGCTTCTCTGATGTCCCTTGGGCTACACTAATACACATGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATGCACTGCTTCTCTGATGTCCCTTGGGCTACACTAATACACATGA  550

seq1  TGGATCAGTTGTTGTGGTCCATAAATAGTAGTGAAAAAGCTCTATAGCAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGATCAGTTGTTGTGGTCCATAAATAGTAGTGAAAAAGCTCTATAGCAT  600

seq1  TAGAACATTGGCATGTGAAAGGGGACATAATCTTTACAAATTCAATACTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGAACATTGGCATGTGAAAGGGGACATAATCTTTACAAATTCAATACTT  650

seq1  GATTGAAGCCCGGCTTTACAACTGCCTGGTTTGTTTGTGGACTAATCCAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGAAGCCCGGCTTTACAACTGCCTGGTTTGTTTGTGGACTAATCCAT  700

seq1  TAACTATTCTCACCATCTTCTTTTTCTTTAACAATCCCAAGATCTCTTCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTATTCTCACCATCTTCTTTTTCTTTAACAATCCCAAGATCTCTTCA  750

seq1  GGAACTATGATGAGATGCCTGTTAAAAGTATACAGGAACTCAAAAAGC-A  799
      |||||||||||||||||||||||||||||||||||||||||||||||| |
seq2  GGAACTATGATGAGATGCCTGTTAAAAGTATACAGGAACTCAAAAAGCAA  800

seq1  ATGGTAATGTTCTCTGAACCAATATGGTGAGGCACCTAACAAGTAGCTTA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGTAATGTTCTCTGAACCAATATGGTGAGGCACCTAACAAGTAGCTTA  850

seq1  GTAC-TTTCTGATACTGTAGTCATGTCAGATCAT-GGTCCAGGAATGGAG  897
      |||| ||||||||||||||||||||||||||||| |||||||||||||||
seq2  GTACTTTTCTGATACTGTAGTCATGTCAGATCATGGGTCCAGGAATGGAG  900

seq1  TCATGTGAGAGAATTCTGAGAAAACTCTAAGAAAACAATATAAGGTCTTG  947
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TCATGTGAGAGAATTCTGAGAAAACTCTAAGAAAAC-ATATAAGGTCTTG  949

seq1  TGACCCCAGTTTCTTCAAAACAGGGAATTGTTCTTAGAATGTTTTCATGC  997
      ||||||||||||||| |||| ||||||||||||| |||||| ||||||||
seq2  TGACCCCAGTTTCTT-AAAAAAGGGAATTGTTCTAAGAATG-TTTCATGC  997

seq1  TCCTCCAAGGTACAGTGGATAGGAGTGAGTTTTCTTTGGATTGCTGATTA  1047
      ||||| |||||| ||||||||||||||||||||| |||||||||||| | 
seq2  TCCTCAAAGGTAAAGTGGATAGGAGTGAGTTTTC-TTGGATTGCTGAATT  1046

seq1  TTGCTTGCTGTT-GTTACTTAATTATACCTCAATGGGAAAACATGTTTGT  1096
       ||||||||||| |||||||| ||||| ||||||| ||||| ||| |   
seq2  ATGCTTGCTGTTGGTTACTTATTTATATCTCAATGTGAAAA-ATGATGTC  1095

seq1  CTTTTATTATC  1107
      |||||||||||
seq2  CTTTTATTATC  1106