BAC Information

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BAC

Clone NameB6Ng01-025O10
Chromosome16 (Build37)
Map Location 66,329,235 - 66,330,399
singlet/doubletsinglet
Overlap genenone
Upstream genePou1f1, Chmp2b, EG383186, Vgll3, LOC664846, LOC100039035
Downstream geneCadm2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-025O10.bB6Ng01-025O10.g
ACCDH857100DH857101
length1,1371,118
definitionDH857100|Mus musculus domesticus DNA, BAC clone: B6Ng01-025O10, 5' end.DH857101|Mus musculus domesticus DNA, BAC clone: B6Ng01-025O10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaattccaacacatatttatatcttaaggttgcctattttctgtg
ccttcctccctgacccccaaagttttccaatctagtcatttgccagtctc
agttttaagtccttcctatttatttacacctcattttttctcatatgcct
aatgtagatccaaacttgattgtctgtatactgttatccagagactggaa
gataatgtattctattgccttctgtactccccttctagtctattgtttgg
catagagaaatcagactttactcaaaacatctgttatttttaagtgtcta
ggtggcgattaaaaagcaacattaagacaaacatttctgtcctaacaatt
cattatctcctcagaatggtgtggaagcttcccactaaatagatgattgc
agaaggatgaaagaaagaaagtatagaagggataagaacaacccgttctc
tcatttcttcctgcattcacttagtgtttaccagccatttcttttgcatg
gacaggcccccgaaggagctcactgactaatgggctggagagaacagaaa
atcaatcctcacaatatattacatcacaagaaatgtgcataggcccagag
agggtgtttggagacacttgatctaactattagaaagaaacaagagctaa
ggggattgcatctgagccactggaagaaggcaagtgaaggcccagaggcc
ggagagtgccggcgaaatgtggaacatgaatgtattctaggttggtctaa
agacagatgggaagacagagcagtacttaaaaccagggaagggctgagtt
tctcaggagaagcatttgaaggtcaactgaagctacatagacattatctg
agtcactcaacggaagtataagtctgaaaaacgaaacatgtaaaactcaa
atgatgcattaaagaaaaaaagagaggaaaaaaatcactgcaaatgtcag
aggaagaaattgtgatttctctgtcaatggaagcaagcgtctttaagtgc
gttcagttagacactgacggattgattaggtttgtcagttactgtatgcg
tcttcacaattatgcccatccttatagccctgaatgactgatcagtcaat
ctaggcaaagaatgcttgggtcatgaacttagaggag
gaattcctgatctttccaagacttttatcatgaatgggtgttggatcttg
tcaaatgctttctccacatctaatgagatgatcctgtggtttttgtcttt
gagtttgtttatataatggattacgttgatggatttctgtatattaaacc
atccctgcatccctggaataaaacctacttggtcagaatggatgattgcg
ttaatgtgttcttggattcggttagggagaattttattgagtattttggc
atcattattcataagggaaattggtctgaagttctctatctttgttgagt
ctttctgtggtttaggtatcagagtaattgtggtttcatagaatgagttg
ggtagagtaacttctacttctattttgtggaatagtttgtgcagaactgg
aattagatcttctttgaaggtctgatagaactctgcactaaacccatctg
gtcctgggctttttttggctggaagactattaatgactgcttctatttct
ttaggggataagagactgtttagatcattaacttgatcctgatttaactt
tggtacccgttatctgtctagaaatatgtccatttcatccaggttttcca
gttttgttgagtacagccttttgtagaaggatctgatggtgttttggatt
tcttcaggatctgttgttatgtctcccttttcatttctgaatttgttaat
tagtatgctgtccctgtgccctctagtgcatctagctaagggtttatcta
tttgttgattttcttaaagaaccaactcctcatttggttaattctttgaa
tagttcttcttgttccacttggttgatttcacccctgtgtttgattattt
cctactgtctactcctcttgggtgaattttcttcctttttttctagagct
tttagatgtgttgtcaagctgctaatgtgtgctctctctaatttcttttt
ggaggcactcagagctatggagtttccctcttaaaaatgcctttcattgt
gtcccataggtttgggtatgtgggacttcattttcattaaactctctaaa
aagcttatctcttatgccctccttgacaacggatcattggagagaaggtt
gttcggagtcgcacggag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_66329235_66330399
seq2: B6Ng01-025O10.b_46_1182

seq1  GAATTCAATTCCAACACATATTTATATCTTAAGGTTGCCTATTTTCTGTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATTCCAACACATATTTATATCTTAAGGTTGCCTATTTTCTGTG  50

seq1  CCTTCCTCCCTGACCCCCAAAGTTTTCCAATCTAGTCATTTGCCAGTCTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCCTCCCTGACCCCCAAAGTTTTCCAATCTAGTCATTTGCCAGTCTC  100

seq1  AGTTTTAAGTCCTTCCTATTTATTTACACCTCATTTTTTCTCATATGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTTTAAGTCCTTCCTATTTATTTACACCTCATTTTTTCTCATATGCCT  150

seq1  AATGTAGATCCAAACTTGATTGTCTGTATACTGTTATCCAGAGACTGGAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAGATCCAAACTTGATTGTCTGTATACTGTTATCCAGAGACTGGAA  200

seq1  GATAATGTATTCTATTGCCTTCTGTACTCCCCTTCTAGTCTATTGTTTGG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAATGTATTCTATTGCCTTCTGTACTCCCCTTCTAGTCTATTGTTTGG  250

seq1  CATAGAGAAATCAGACTTTACTCAAAACATCTGTTATTTTTAAGTGTCTA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGAGAAATCAGACTTTACTCAAAACATCTGTTATTTTTAAGTGTCTA  300

seq1  GGTGGCGATTAAAAAGCAACATTAAGACAAACATTTCTGTCCTAACAATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGGCGATTAAAAAGCAACATTAAGACAAACATTTCTGTCCTAACAATT  350

seq1  CATTATCTCCTCAGAATGGTGTGGAAGCTTCCCACTAAATAGATGATTGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATCTCCTCAGAATGGTGTGGAAGCTTCCCACTAAATAGATGATTGC  400

seq1  AGAAGGATGAAAGAAAGAAAGTATAGAAGGGATAAGAACAACCCGTTCTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGGATGAAAGAAAGAAAGTATAGAAGGGATAAGAACAACCCGTTCTC  450

seq1  TCATTTCTTCCTGCATTCACTTAGTGTTTACCAGCCATTTCTTTTGCATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTTCTTCCTGCATTCACTTAGTGTTTACCAGCCATTTCTTTTGCATG  500

seq1  GACAGGCCCCCGAAGGAGCTCACTGACTAATGGGCTGGAGAGAACAGAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGGCCCCCGAAGGAGCTCACTGACTAATGGGCTGGAGAGAACAGAAA  550

seq1  ATCAATCCTCACAATATATTACATCACAAGAAATGTGCATAGGCCCAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAATCCTCACAATATATTACATCACAAGAAATGTGCATAGGCCCAGAG  600

seq1  AGGGTGTTTGGAGACACTTGATCTAACTATTAGAAAGAAACAAGAGCTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTGTTTGGAGACACTTGATCTAACTATTAGAAAGAAACAAGAGCTAA  650

seq1  GGGGATTGCATCTGAGCCACTGGAAGAAGGCAAGTGAAGGCCCAGAGGCC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGATTGCATCTGAGCCACTGGAAGAAGGCAAGTGAAGGCCCAGAGGCC  700

seq1  GGAGAGTGCCGGCGAAATGTGGAACATGAATGTATTCTAGGTTGGTCTAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGAGTGCCGGCGAAATGTGGAACATGAATGTATTCTAGGTTGGTCTAA  750

seq1  AGACAGATGGGAAGACAGAGCAGTACTTAAAACCA-GGAAGGGCTGAGTT  799
      ||||||||||||||||||||||||||||||||||| ||||||||||||||
seq2  AGACAGATGGGAAGACAGAGCAGTACTTAAAACCAGGGAAGGGCTGAGTT  800

seq1  TCTCAGGAGAAGCATTTGAAGGTCAACTGAAGCTACATAGACATTATCTG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGAGAAGCATTTGAAGGTCAACTGAAGCTACATAGACATTATCTG  850

seq1  AGTCACTCAACGGAAGTAATAAGTCTGAAAAACGAAACATGTAAAACTCA  899
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AGTCACTCAACGGAAGT-ATAAGTCTGAAAAACGAAACATGTAAAACTCA  899

seq1  AATGATGCATTAAAGAAAAAAAGAGAGGAAAAAAAATCACTGCAAATGTC  949
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  AATGATGCATTAAAGAAAAAAAGAGAGG-AAAAAAATCACTGCAAATGTC  948

seq1  AGAGGAAGAAAGTGTGATTTCTCAGGTCAATGGAAGCAGGCGTCTTTAGT  999
      ||||||||||| |||||||||||  ||||||||||||| |||||||||  
seq2  AGAGGAAGAAATTGTGATTTCTC-TGTCAATGGAAGCAAGCGTCTTTAAG  997

seq1  GGCGTTCCAGTATAGACACTTGACCGATTGATTAGGTTATGGTCAGTTAC  1049
       ||||| |||| ||||||| |||| ||||||||||||  | |||||||||
seq2  TGCGTT-CAGT-TAGACAC-TGACGGATTGATTAGGT--TTGTCAGTTAC  1042

seq1  ATGTTATGCGGTCATCACCAATTGATGCCCATTCCTTATTTAGTCCTCTG  1099
       || ||||| ||| ||| ||||| ||||||| ||||||  ||| |||   
seq2  -TG-TATGC-GTCTTCA-CAATT-ATGCCCA-TCCTTA--TAGCCCT---  1081

seq1  AAATGACTAGAATCATGTCAATCCTATGGCAAAAGAAATGCTTGGGTCCA  1149
       |||||||   |||| |||||| ||| ||||||   ||||||||||| ||
seq2  GAATGACT--GATCA-GTCAAT-CTA-GGCAAA--GAATGCTTGGGT-CA  1123

seq1  TGAACTATAGGAGGAG  1165
      |||||| || ||||||
seq2  TGAACT-TA-GAGGAG  1137