BAC Information

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BAC

Clone NameB6Ng01-026A24
Chromosome16 (Build37)
Map Location 61,704,483 - 61,848,435
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043524, LOC668183
Downstream geneLOC100043806, Nsun3, Arl13b, Stx19
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-026A24.bB6Ng01-026A24.g
ACCDH857212DH857213
length1,084616
definitionDH857212|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A24, 5' end.DH857213|Mus musculus domesticus DNA, BAC clone: B6Ng01-026A24, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(61,704,483 - 61,705,568)(61,847,876 - 61,848,435)
sequence
gaattcttaaaaacatatggttggcaaaccagggcagagaaaaaaattac
ataaggtattagttgttctatcacgttaggtaatgaaatagattctttta
caagctgtgtctaataactttattcttataagaagtatataaaactaatt
tattattggataaaatcactttgaaagacaaaatatttcacataacatag
aagtttatcttccatttttcaaaaatgaggaagtcattttacgaaatatg
tgacatttaaatatttatatttattgatcatttagaattcctctcatggc
attaatccttaaatcatatccatgtctgagtgttttatttaccaactaat
ttgcagaactaacttaaaaatattgaatagctcctaatctctcacatatt
agaaaccctccacctgccctagagccttccatacttcactgccttctctg
ttactgcattcacagcccactataatttcaagtcaaactctaaactttca
aaactgaaaatgttaatgatgtgaactccttaagccccacaatataaaat
ttgtctatggtgccatagtgctgagatgtattggtttgctttaatttcca
tgacaaaataccacagatcatgtggcttaaataatgatgggtataagttg
taaattaatgaaagaccagaagcttgtatcctaattctgctgttgcattg
cagagagctgtactctctcttcccctgtccccaatctttgtgcgaatacc
tccttggtgcttgttttacatgactaagtttccttctctaacatgctcct
ttgcagctcttaatattctttctctgttctgtatgtttagtgttttgatt
accgtgcaccaagggggaactgcttttcttatcctatttggtgttccctt
tattaatgtacattgataggaagctccttctttggcttaagaaatgttta
ttctatgaattattgaaatatttgttgtgcctggtctaggtctcttcttc
actcctctatccatattataggatttgcttctctacataatgcagcaaat
actagatgttttgtgtggaagattcatttgacaa
gaattctttgaaagctctaccacatttttaatggggttatttgaatttct
ggattccagcttcttcagctatttgtatattttgaatattagtcctcttt
gagatttgggattggtaaaaattattttccaatctgttggtggccctttt
gtcttattgacagtatctttttaccctacagaagttttgcaattttatga
ggtcacatttgtagattcttgatcgtacagcacaggccattgctgttctg
tttaggaatttttccccgtgcccatatcttcgagaatttccccactttct
cctctataaatttcagtgtctctggttttatgtggagttctttgatccac
ttagacttgagttttgtacaaggagataagaatggatcaatttgcattct
tttacgtgataaccgtcagttgtgccagcagcatttgttgaaaatgctgt
cttttttccactggatagttttagctcctttgtcaaagatcaggtgagca
taggtgtgtgggttcatttctgggtcttcaattagtttttgctttcttac
ctacagtttctatccagctagattgtatggagcccaatttagcagatggg
ataaatctttctgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_61704483_61705568
seq2: B6Ng01-026A24.b_45_1128

seq1  GAATTCTTAAAAACATATGGTTGGCAAACCAGGGCAGAGAAAAAAATTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTAAAAACATATGGTTGGCAAACCAGGGCAGAGAAAAAAATTAC  50

seq1  ATAAGGTATTAGTTGTTCTATCACGTTAGGTAATGAAATAGATTCTTTTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGGTATTAGTTGTTCTATCACGTTAGGTAATGAAATAGATTCTTTTA  100

seq1  CAAGCTGTGTCTAATAACTTTATTCTTATAAGAAGTATATAAAACTAATT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTGTGTCTAATAACTTTATTCTTATAAGAAGTATATAAAACTAATT  150

seq1  TATTATTGGATAAAATCACTTTGAAAGACAAAATATTTCACATAACATAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTGGATAAAATCACTTTGAAAGACAAAATATTTCACATAACATAG  200

seq1  AAGTTTATCTTCCATTTTTCAAAAATGAGGAAGTCATTTTACGAAATATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTTATCTTCCATTTTTCAAAAATGAGGAAGTCATTTTACGAAATATG  250

seq1  TGACATTTAAATATTTATATTTATTGATCATTTAGAATTCCTCTCATGGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACATTTAAATATTTATATTTATTGATCATTTAGAATTCCTCTCATGGC  300

seq1  ATTAATCCTTAAATCATATCCATGTCTGAGTGTTTTATTTACCAACTAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAATCCTTAAATCATATCCATGTCTGAGTGTTTTATTTACCAACTAAT  350

seq1  TTGCAGAACTAACTTAAAAATATTGAATAGCTCCTAATCTCTCACATATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGAACTAACTTAAAAATATTGAATAGCTCCTAATCTCTCACATATT  400

seq1  AGAAACCCTCCACCTGCCCTAGAGCCTTCCATACTTCACTGCCTTCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAACCCTCCACCTGCCCTAGAGCCTTCCATACTTCACTGCCTTCTCTG  450

seq1  TTACTGCATTCACAGCCCACTATAATTTCAAGTCAAACTCTAAACTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTGCATTCACAGCCCACTATAATTTCAAGTCAAACTCTAAACTTTCA  500

seq1  AAACTGAAAATGTTAATGATGTGAACTCCTTAAGCCCCACAATATAAAAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTGAAAATGTTAATGATGTGAACTCCTTAAGCCCCACAATATAAAAT  550

seq1  TTGTCTATGGTGCCATAGTGCTGAGATGTATTGGTTTGCTTTAATTTCCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTCTATGGTGCCATAGTGCTGAGATGTATTGGTTTGCTTTAATTTCCA  600

seq1  TGACAAAATACCACAGATCATGTGGCTTAAATAATGATGGGTATAAGTTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGACAAAATACCACAGATCATGTGGCTTAAATAATGATGGGTATAAGTTG  650

seq1  TAAATTAATGAAAGACCAGAAGCTTGTATCCTAATTCTGCTGTTGCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATTAATGAAAGACCAGAAGCTTGTATCCTAATTCTGCTGTTGCATTG  700

seq1  CAGAGAGCTGTACTCTCTCTTCCCCTGTCCCCAATCTTTGTGCGAATACC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAGAGCTGTACTCTCTCTTCCCCTGTCCCCAATCTTTGTGCGAATACC  750

seq1  TCCTTGGTGCTTGTTTTACATGACTAAGTTTCCTTCTCTAACATGCTCCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTGGTGCTTGTTTTACATGACTAAGTTTCCTTCTCTAACATGCTCCT  800

seq1  TTGCAGCTCTTAATATTCTTTCTCTGTTCTGTATGTTTAGTGTTTTGATT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAGCTCTTAATATTCTTTCTCTGTTCTGTATGTTTAGTGTTTTGATT  850

seq1  ACCGTGCACCAAGGGGGAACTGCTTTTCTTATCCTATTTGGTGTTCCCTT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCGTGCACCAAGGGGGAACTGCTTTTCTTATCCTATTTGGTGTTCCCTT  900

seq1  TATTAATGTACATTGATAGGAAGCTCCTTCTTTGGCTTAAGAAATGTTTA  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAATGTACATTGATAGGAAGCTCCTTCTTTGGCTTAAGAAATGTTTA  950

seq1  TTCTATGAATTTATTGAAAATATTTGTTGTGCCTTGTCCTAGGTCTCTTC  1000
      ||||||||| |||||| ||||||||||||||||| || ||||||||||||
seq2  TTCTATGAA-TTATTG-AAATATTTGTTGTGCCTGGT-CTAGGTCTCTTC  997

seq1  -TCACTCCTCTATCCATATTATTAGATTTGC-TCTCTACATAATGCAGCA  1048
       |||||||||||||||||||||  ||||||| ||||||||||||||||||
seq2  TTCACTCCTCTATCCATATTATAGGATTTGCTTCTCTACATAATGCAGCA  1047

seq1  AATAACCTAGATGTTTTGTGT-GAAGATTCATTTGACAA  1086
      ||||  ||||||||||||||| |||||||||||||||||
seq2  AATA--CTAGATGTTTTGTGTGGAAGATTCATTTGACAA  1084

seq1: chr16_61847876_61848435
seq2: B6Ng01-026A24.g_118_680 (reverse)

seq1  ACACAGAAAGATTTAT-CCATCTGCT-AATTGGGCTCCATACAATCTAGC  48
      |||||||||||||||| ||||||||| |||||||||||||||||||||||
seq2  ACACAGAAAGATTTATCCCATCTGCTAAATTGGGCTCCATACAATCTAGC  50

seq1  TGGATAGAAACTGTAGGTAAGAAAGC-AAAACTAATTGAAGACCCAGAAA  97
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  TGGATAGAAACTGTAGGTAAGAAAGCAAAAACTAATTGAAGACCCAGAAA  100

seq1  TGAACCCACACACCTATGCTCACCTGATCTTTGACAAAGGAGCTAAAACT  147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAACCCACACACCTATGCTCACCTGATCTTTGACAAAGGAGCTAAAACT  150

seq1  ATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGCTGCTGGCACAACTG  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAGTGGAAAAAAGACAGCATTTTCAACAAATGCTGCTGGCACAACTG  200

seq1  ACGGTTATCACGTAAAAGAATGCAAATTGATCCATTCTTATCTCCTTGTA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGTTATCACGTAAAAGAATGCAAATTGATCCATTCTTATCTCCTTGTA  250

seq1  CAAAACTCAAGTCTAAGTGGATCAAAGAACTCCACATAAAACCAGAGACA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAACTCAAGTCTAAGTGGATCAAAGAACTCCACATAAAACCAGAGACA  300

seq1  CTGAAATTTATAGAGGAGAAAGTGGGGAAATTCTCGAAGATATGGGCACG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATTTATAGAGGAGAAAGTGGGGAAATTCTCGAAGATATGGGCACG  350

seq1  GGGAAAAATTCCTAAACAGAACAGCAATGGCCTGTGCTGTACGATCAAGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAAAAATTCCTAAACAGAACAGCAATGGCCTGTGCTGTACGATCAAGA  400

seq1  ATCTACAAATGTGACCTCATAAAATTGCAAAACTTCTGTAGGGTAAAAAG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACAAATGTGACCTCATAAAATTGCAAAACTTCTGTAGGGTAAAAAG  450

seq1  ATACTGTCAATAAGACAAAAGGGCCACCAACAGATTGGAAAATAATTTTT  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTGTCAATAAGACAAAAGGGCCACCAACAGATTGGAAAATAATTTTT  500

seq1  ACCAATCCCAAATCTCAAAGAGGACTAATATTCAAAATATACAAATAGCT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATCCCAAATCTCAAAGAGGACTAATATTCAAAATATACAAATAGCT  550

seq1  GAAGAAGCTGGAA  560
      |||||||||||||
seq2  GAAGAAGCTGGAA  563