BAC Information

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BAC

Clone NameB6Ng01-027E15
Chromosome16 (Build37)
Map Location 15,339,487 - 15,339,962
singlet/doubletsinglet
Overlap genenone
Upstream geneAbcc1, Gm1758, Snai2, Efcab1, LOC100042737, LOC665653, LOC385748, LOC100042743
Downstream geneLOC547302, EG632352, Ube2v2, LOC665682, Mcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-027E15.bB6Ng01-027E15.g
ACCDH858073DH858074
length470785
definitionDH858073|Mus musculus domesticus DNA, BAC clone: B6Ng01-027E15, 5' end.DH858074|Mus musculus domesticus DNA, BAC clone: B6Ng01-027E15, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
aaaaagaattttcagtgtgttggaagattcagggagggatcattttgaat
attttcagattctttagctaaaagaagtcctgaatgatgaaggtaggatt
ctcactattttttgtctcccttagtttgcagggaaattttgaatgtgtta
aatctgtaattaaaaatctatgtggacccacaaagatagtcatcatgttg
acaagggagttgttaacttgtagaaagcagcagaagtggaaaggagaagt
gagggagtgaagggagaggagatgatacttagaagtgctgagctgggcag
gcttaatgtagactgtcttctccagtgggatttaatctgtccttccaagt
atcagatcattgcctctaaccattaaagggtctgggtagcctgccacagt
gcttaggaactacttttctctgatcacaagtcctattttgctctgaaaat
aacctgtaccattagagcaa
gaattctttgtttagctctgtggcccatttttaaatagggttatttggtt
ttctagagtctaatttcttgagttctttgtatatattggatactagccct
ctgttatgtagggataagtaaagatcttttcccaatctgttgcttgcctt
tttgtcttatagacagtgtcctttgtcttaaagaagctttgcaattttat
gaggtcccatttgtctattcttgatcttagagcataagccaaagatgttc
tgttcaggaaattttcccctgtgcccatgtgttcgaggcgtttccccact
tactcttttgttagattcagtgtatctggatttatgtggagttccttgat
ccacttggttttgagctttgtacatggagataagaatggatcaattcaca
ttcttctatatgttgagtgccagttgaaccagcacaaatttttgaaaatg
tcttttttttccaccattggatggttttagctcctatcaagtgaccatag
gtgcatgttttcatttctgggtcttcaagtctgttccattgatctacctg
tctgtcactgtaccaataccatgaaggttttatcactattgctctgtagt
tacagcttgaggtcaggggatggtgattccaccagaggttcttttattgt
tgagaatagtttttctctatcctgggtttttttgttttgttttgtttttg
tttttttgttatccaaatgaatttgagaattgctctttctaactctatgc
agaattgtgttggaattttgataggtattgcaggg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15339487_15339962
seq2: B6Ng01-027E15.b_46_521 (reverse)

seq1  TTGCTCTAATGGTACAGGTTATTTTCAGAGCAAAATAGGACTTGTGATCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCTAATGGTACAGGTTATTTTCAGAGCAAAATAGGACTTGTGATCA  50

seq1  GAGAAAAGTAGTTCCTAAGCACTGTGGCAGGCTACCCAGACCCTTTAATG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGTAGTTCCTAAGCACTGTGGCAGGCTACCCAGACCCTTTAATG  100

seq1  GTTAGAGGCAATGATCTGATACTTGGAAGGACAGATTAAATCCCACTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGAGGCAATGATCTGATACTTGGAAGGACAGATTAAATCCCACTGGA  150

seq1  GAAGACAGTCTACATTAAGCCTGCCCAGCTCAGCACTTCTAAGTATCATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGACAGTCTACATTAAGCCTGCCCAGCTCAGCACTTCTAAGTATCATC  200

seq1  TCCTCTCCCTTCACTCCCTCACTTCTCCTTTCCACTTCTGCTGCTTTCTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCTCCCTTCACTCCCTCACTTCTCCTTTCCACTTCTGCTGCTTTCTA  250

seq1  CAAGTTAACAACTCCCTTGTCAACATGATGACTATCTTTGTGGGTCCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTAACAACTCCCTTGTCAACATGATGACTATCTTTGTGGGTCCACA  300

seq1  TAGATTTTTAATTACAGATTTAACACATTCAAAATTTCCCTGCAAACTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGATTTTTAATTACAGATTTAACACATTCAAAATTTCCCTGCAAACTAA  350

seq1  GGGAGACAAAAAATAGTGAGAATCCTACCTTCATCATTCAGGACTTCTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGACAAAAAATAGTGAGAATCCTACCTTCATCATTCAGGACTTCTTT  400

seq1  TAGCTAAAGAATCTGAAAATATTCAAAATGATCCCTCCCTGAATCTTCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTAAAGAATCTGAAAATATTCAAAATGATCCCTCCCTGAATCTTCCA  450

seq1  ACACACTGAAAATTCTTTTTGAATTC  476
      ||||||||||||||||||||||||||
seq2  ACACACTGAAAATTCTTTTTGAATTC  476