BAC Information

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BAC

Clone NameB6Ng01-030F16
Chromosome16 (Build37)
Map Location 32,998,971 - 33,136,333
singlet/doubletdoublet
Overlap geneLrch3, Iqcg, Rpl35a, Lmln
Upstream geneSenp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a, Osta, Zdhhc19, LOC385820, Tfrc, Tnk2, ENSMUSG00000075265, LOC672302, Muc4, Muc20, 1700021K19Rik, Fyttd1, EG625660
Downstream geneLOC638791, Osbpl11, Snx4, Zfp148, Slc12a8, 4632417D23Rik, Heg1, Muc13, Itgb5, Umps, Kalrn, LOC100043670
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030F16.bB6Ng01-030F16.g
ACCDH860290DH860291
length1,0751,071
definitionDH860290|Mus musculus domesticus DNA, BAC clone: B6Ng01-030F16, 5' end.DH860291|Mus musculus domesticus DNA, BAC clone: B6Ng01-030F16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(32,998,971 - 33,000,075)(33,135,253 - 33,136,333)
sequence
gaattcaaatcagccttctagagaagttgtactaattcagttacaaaata
tgggcaggaattggccagttagcaacttaaggaattgttcagctgttgag
catagatgacactcggggtgagtgtgtggataagtctcaggccatgtttt
agaggccttaaaacaagtcaagcagttagaggtttgtactagtgtaaata
gtgtaaatagtaaatagcttttgaaaatgtttgttgatcattcagtagac
atagcaatgcaatgcacactgttagaacttcactaggaagggccaacaag
atggctcagccaataaagaatcttaccaccaagcctcacaacctgtttac
agttggatgtggtggagactaatcgtgcagaaagggctctttgtactttt
ctatccatttatggataacaatttgctgacctgacccctggctctaggct
ggagccaggcttatgacttatgtctacagcctggctgttctgttggcaga
atcctgtcagatgtctttgagttcatttatgggatcaggaaatgtatcac
taagaggcattttccttgaaagtccagtcacttatgaaccagacatttta
aatatcaggttttattccaatatcatgtattttgaagaaagtttagattc
acctttacaatacagtggactggagaacagtggctggagaaagctcaaga
ggttaaacacatggctcttgaggaagaactgggcggggttcccagtacct
acatgatggctcacaaacatctgtaattccagttcctggggacctgatgc
cttcttctgacttccgtgggtaccaggcacacaagtgtatacaagcaagc
aagcaaacacataaaataaataaataatccaaaaatagaaagaaaacaaa
acagtggtatatactagaagggttagacacagccacagaaagaatccatc
atcacatgtaggcagtcagcagcccgcagaaggttaggaacagttctcat
cgttggactactaggatttcttctgctctcaatgaggaattagcatgcta
agaagctactcaaccttctaatggg
gaattcaattgctagaccatctcaaggtgcccaatggactcataaacatg
tttggcctaaacttcatgtcctctgtgaaacaggggtgatagagcctcat
tacaaaagccctaattgcaagcccgtttgcagttgaagacaaccccgacc
agcaggaggaaactcagcctcaggattccctcctgtctaccactgatggg
gccctacccacactccagggacaccacgaggactgggtgagccagcttta
taaaataaaaaaggggagatatcggcagctatgttgcctgcttctgtgag
aacctgcctgccaggcagagtcaagtctactggcagatttcctggcctgc
tgatgcttagaacaggagtggacggatgtacacgaagctcgagaagtcaa
ggggcagaatgttctgttagtcttggaggaagcaacagggaggaataaag
aggcctccagatgggtccagatatcgaatgtatgccagccattgtctctg
cttcccatgattgacttcatctcccataatgctgtaaagtataaaaagcc
taagagaattaaactcaggctgccacagtgttgacgggacagcactcccg
atttctaacctttgtctctgagtcctcttttccgtctttcctataaatca
tcctcactccccacacctcccctgcttaactttgtaccggccagactggt
acaccccaatacacctgtctttgtcatttgctctggccataagaagtcct
actattagggtctaagaatcgccaaagaatataccccagactcaaatagt
aggcaaaagcaaagagcatttaagcagttgaatttcctgcctgcaagggt
ctccccatttgagaatggagacccctagtggcccagtttctattgtcagt
tgggagattccagggagggtctatgtcttttacttggtggttagctctct
ctctagagtcccgactgatcctatattggtaggaatctagagactttcca
ggctgctattcactcttggctacctattcccttcaggccgagagacaagg
tgtctccgagatggctgccca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_32998971_33000075
seq2: B6Ng01-030F16.b_47_1121

seq1  GAATTCAAATCAGCCTTCTAGAGAAGTTGTACTAATTCAGTTACAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAAATCAGCCTTCTAGAGAAGTTGTACTAATTCAGTTACAAAATA  50

seq1  TGGGCAGGAATTGGCCAGTTAGCAACTTAAGGAATTGTTCAGCTGTTGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGCAGGAATTGGCCAGTTAGCAACTTAAGGAATTGTTCAGCTGTTGAG  100

seq1  CATAGATGACACTCGGGGTGAGTGTGTGGATAAGTCTCAGGCCATGTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGATGACACTCGGGGTGAGTGTGTGGATAAGTCTCAGGCCATGTTTT  150

seq1  AGAGGCCTTAAAACAAGTCAAGCAGTTAGAGGTTTGTACTAGTGTAAATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGGCCTTAAAACAAGTCAAGCAGTTAGAGGTTTGTACTAGTGTAAATA  200

seq1  GTGTAAATAGTAAATAGCTTTTGAAAATGTTTGTTGATCATTCAGTAGAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTAAATAGTAAATAGCTTTTGAAAATGTTTGTTGATCATTCAGTAGAC  250

seq1  ATAGCAATGCAATGCACACTGTTAGAACTTCACTAGGAAGGGCCAACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCAATGCAATGCACACTGTTAGAACTTCACTAGGAAGGGCCAACAAG  300

seq1  ATGGCTCAGCCAATAAAGAATCTTACCACCAAGCCTCACAACCTGTTTAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGCTCAGCCAATAAAGAATCTTACCACCAAGCCTCACAACCTGTTTAC  350

seq1  AGTTGGATGTGGTGGAGACTAATCGTGCAGAAAGGGCTCTTTGTACTTTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGGATGTGGTGGAGACTAATCGTGCAGAAAGGGCTCTTTGTACTTTT  400

seq1  CTATCCATTTATGGATAACAATTTGCTGACCTGACCCCTGGCTCTAGGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATCCATTTATGGATAACAATTTGCTGACCTGACCCCTGGCTCTAGGCT  450

seq1  GGAGCCAGGCTTATGACTTATGTCTACAGCCTGGCTGTTCTGTTGGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCCAGGCTTATGACTTATGTCTACAGCCTGGCTGTTCTGTTGGCAGA  500

seq1  ATCCTGTCAGATGTCTTTGAGTTCATTTATGGGATCAGGAAATGTATCAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGTCAGATGTCTTTGAGTTCATTTATGGGATCAGGAAATGTATCAC  550

seq1  TAAGAGGCATTTTCCTTGAAAGTCCAGTCACTTATGAACCAGACATTTTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGGCATTTTCCTTGAAAGTCCAGTCACTTATGAACCAGACATTTTA  600

seq1  AATATCAGGTTTTATTCCAATATCATGTATTTTGAAGAAAGTTTAGATTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATCAGGTTTTATTCCAATATCATGTATTTTGAAGAAAGTTTAGATTC  650

seq1  ACCTTTACAATACAGTGGACTGGAGAACAGTGGCTGGAGAAGGCTCAAGA  700
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  ACCTTTACAATACAGTGGACTGGAGAACAGTGGCTGGAGAAAGCTCAAGA  700

seq1  GGTTAAACACATGGCTCTTGAGGAAGAACTGGGCGGGGTTCCCAGTACCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTAAACACATGGCTCTTGAGGAAGAACTGGGCGGGGTTCCCAGTACCT  750

seq1  ACATGATGGCTCACAAACATCTGTAATTCCAGTTCCTGGGGACCTGATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGATGGCTCACAAACATCTGTAATTCCAGTTCCTGGGGACCTGATGC  800

seq1  CTTCTTCTGACTTCCGTGGGTACCAGGCACACAAGTGTATACAAGCAAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCTGACTTCCGTGGGTACCAGGCACACAAGTGTATACAAGCAAGC  850

seq1  AAAGCAAACACATAAAATAAATAAATAAATCCAAAAAATAAGAAAGAAAA  900
       ||||||||||||||||||||||||| ||||||||||   ||||||||||
seq2  -AAGCAAACACATAAAATAAATAAAT-AATCCAAAAA--TAGAAAGAAAA  896

seq1  CAAAACAGTGGTATAATACTAGGAAGGGTTAGAACACAAGGCCCACAGGA  950
      |||||||||||||| |||||| |||||||||| |||||    ||||| ||
seq2  CAAAACAGTGGTAT-ATACTA-GAAGGGTTAG-ACACA---GCCACA-GA  939

seq1  AAGAAATCCATCATCACAATGTAGGCAGTCAGGCAGCCCCGCCAGGAGGG  1000
      ||| ||||||||||||| ||||||||||||| |||| |||||   || ||
seq2  AAG-AATCCATCATCAC-ATGTAGGCAGTCA-GCAG-CCCGC--AGAAGG  983

seq1  TTAGGAACAGTTCTTCCATCGTTGGACTACCTAGGATTTTCTTCTTTGCT  1050
      ||||||||||||||  ||||||||||||| |||||| |||||||  ||| 
seq2  TTAGGAACAGTTCT--CATCGTTGGACTA-CTAGGA-TTTCTTC--TGC-  1026

seq1  TCTCAGTGGAGGAATTAAGCTATGCTAAGATAGCTACTCAGCCTTACTAA  1100
      ||||| | |||||||| ||| ||||||||| ||||||||| |||| ||||
seq2  TCTCAAT-GAGGAATT-AGC-ATGCTAAGA-AGCTACTCAACCTT-CTAA  1071

seq1  CTGGG  1105
       ||||
seq2  -TGGG  1075

seq1: chr16_33135253_33136333
seq2: B6Ng01-030F16.g_69_1139 (reverse)

seq1  TGGGCAGCCA-CTCGGAGGACACCTTGTCATCT-GGCCTGAAGAGGAAAT  48
      |||||||||| |||||| ||||||||||| ||| |||||||  ||| |||
seq2  TGGGCAGCCATCTCGGA-GACACCTTGTC-TCTCGGCCTGA--AGGGAAT  46

seq1  AGGTAG-CTAGAGTGAATAAGCAGCCTGGAAAGTCTCTAGATTCCTAACC  97
      |||||| | ||||||||| ||||||||||||||||||||||||||| |||
seq2  AGGTAGCCAAGAGTGAAT-AGCAGCCTGGAAAGTCTCTAGATTCCT-ACC  94

seq1  AATTATAGGATCAGTCGGGACCTCTAGAGAGAGAGCTAACCAACCAAGGT  147
      || ||||||||||||||||| |||||||||||||||||||| ||||| ||
seq2  AA-TATAGGATCAGTCGGGA-CTCTAGAGAGAGAGCTAACC-ACCAA-GT  140

seq1  AAAAGGACATAGACCCCTCCCTGGAATTCTCCCAACTGACAATAGAAACT  197
      |||| |||||||| |||||||||||| |||||||||||||||||||||||
seq2  AAAA-GACATAGA-CCCTCCCTGGAA-TCTCCCAACTGACAATAGAAACT  187

seq1  GGGCCACTAGGGGTCTCCATTCTCAAATGGGGAGACCCTTGCAGGCAGGA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCCACTAGGGGTCTCCATTCTCAAATGGGGAGACCCTTGCAGGCAGGA  237

seq1  AATTCAACTGCTTAAATGCTCTTTGCTTTTGCCTACTATTTGAGTCTGGG  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAACTGCTTAAATGCTCTTTGCTTTTGCCTACTATTTGAGTCTGGG  287

seq1  GTATATTCTTTGGCGATTCTTAGACCCTAATAGTAGGACTTCTTATGGCC  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATTCTTTGGCGATTCTTAGACCCTAATAGTAGGACTTCTTATGGCC  337

seq1  AGAGCAAATGACAAAGACAGGTGTATTGGGGTGTACCAGTCTGGCCGGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGCAAATGACAAAGACAGGTGTATTGGGGTGTACCAGTCTGGCCGGTA  387

seq1  CAAAGTTAAGCAGGGGAGGTGTGGGGAGTGAGGATGATTTATAGGAAAGA  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGTTAAGCAGGGGAGGTGTGGGGAGTGAGGATGATTTATAGGAAAGA  437

seq1  CGGAAAAGAGGACTCAGAGACAAAGGTTAGAAATCGGGAGTGCTGTCCCG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGAAAAGAGGACTCAGAGACAAAGGTTAGAAATCGGGAGTGCTGTCCCG  487

seq1  TCAACACTGTGGCAGCCTGAGTTTAATTCTCTTAGGCTTTTTATACTTTA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAACACTGTGGCAGCCTGAGTTTAATTCTCTTAGGCTTTTTATACTTTA  537

seq1  CAGCATTATGGGAGATGAAGTCAATCATGGGAAGCAGAGACAATGGCTGG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGCATTATGGGAGATGAAGTCAATCATGGGAAGCAGAGACAATGGCTGG  587

seq1  CATACATTCGATATCTGGACCCATCTGGAGGCCTCTTTATTCCTCCCTGT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATACATTCGATATCTGGACCCATCTGGAGGCCTCTTTATTCCTCCCTGT  637

seq1  TGCTTCCTCCAAGACTAACAGAACATTCTGCCCCTTGACTTCTCGAGCTT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTTCCTCCAAGACTAACAGAACATTCTGCCCCTTGACTTCTCGAGCTT  687

seq1  CGTGTACATCCGTCCACTCCTGTTCTAAGCATCAGCAGGCCAGGAAATCT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTGTACATCCGTCCACTCCTGTTCTAAGCATCAGCAGGCCAGGAAATCT  737

seq1  GCCAGTAGACTTGACTCTGCCTGGCAGGCAGGTTCTCACAGAAGCAGGCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCAGTAGACTTGACTCTGCCTGGCAGGCAGGTTCTCACAGAAGCAGGCA  787

seq1  ACATAGCTGCCGATATCTCCCCTTTTTTATTTTATAAAGCTGGCTCACCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATAGCTGCCGATATCTCCCCTTTTTTATTTTATAAAGCTGGCTCACCC  837

seq1  AGTCCTCGTGGTGTCCCTGGAGTGTGGGTAGGGCCCCATCAGTGGTAGAC  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCCTCGTGGTGTCCCTGGAGTGTGGGTAGGGCCCCATCAGTGGTAGAC  887

seq1  AGGAGGGAATCCTGAGGCTGAGTTTCCTCCTGCTGGTCGGGGTTGTCTTC  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGGGAATCCTGAGGCTGAGTTTCCTCCTGCTGGTCGGGGTTGTCTTC  937

seq1  AACTGCAAACGGGCTTGCAATTAGGGCTTTTGTAATGAGGCTCTATCACC  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCAAACGGGCTTGCAATTAGGGCTTTTGTAATGAGGCTCTATCACC  987

seq1  CCTGTTTCACAGAGGACATGAAGTTTAGGCCAAACATGTTTATGAGTCCA  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGTTTCACAGAGGACATGAAGTTTAGGCCAAACATGTTTATGAGTCCA  1037

seq1  TTGGGCACCTTGAGATGGTCTAGCAATTGAATTC  1081
      ||||||||||||||||||||||||||||||||||
seq2  TTGGGCACCTTGAGATGGTCTAGCAATTGAATTC  1071