BAC Information

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BAC

Clone NameB6Ng01-030O14
Chromosome16 (Build37)
Map Location 8,145,446 - 8,240,610
singlet/doubletdoublet
Overlap genenone
Upstream geneA2bp1
Downstream gene4930511J11Rik, BC024814, Abat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030O14.bB6Ng01-030O14.g
ACCDH860677DH860678
length1,055711
definitionDH860677|Mus musculus domesticus DNA, BAC clone: B6Ng01-030O14, 5' end.DH860678|Mus musculus domesticus DNA, BAC clone: B6Ng01-030O14, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,145,446 - 8,146,370)(8,239,900 - 8,240,610)
sequence
gaattctcagtttagttgtataccccatattttgattgggttgtttggtt
tttttggtgattaacttcttgagttctttatatattttggatattaatcc
tctatcagatgtggggttagtggagatttttttttcccaatctgtaggtt
gctgatttgtcttattgactgtcctttgccttacagaagctttctagttt
cctgaggtcccatttattaattcttgatcttagatcatgagccattggag
ttctgtttaggaaatttccccctgtgccaatgagtccctgacctcaagct
ttactacagagcagtagtgatagaaactgcatggtattggtacagagaca
gacacgttgatcaatggaatagaattgaagtcccagaaataaaaccacac
acttacagtcacttgatctttgacaaagtccaaagtcaccaaaaatatac
aatggaaaagagaaagcatcttaaataaatggtgctggtctaactggctg
tctgtatgtagaagaacaaaaatagactcatatttgtcaccttgtacaaa
gctgaagtccaagttgatcaaggaccttaacataaaaccagatacactga
atctaatagaatagaaagtgggaaagaatctcaaagtcctttctacttcc
agaaatctaagagcaaatttctaaggtgggtaacattgtgttcccctcct
cttctgctctctgtgacttacagaacatccagttttggaatcaccacact
tgcagagctccagacagaacaaagaagatggaaacatccctgaagtagac
tacccttctgcagcacaggcacacacaaagtgaaagtgctacacacagat
ttgggtactcaccctggtatggcaagattaatttcagcagagagcttcac
atcacataatggtagatcatgaactgcatttacttccctagcaaataaag
tacacgggaaagattgaaagacatacattggtttattgtcttgtggaatt
gcaggttcaggccatagaatgcctattgcctcacgttctcgagggtggat
acaaa

gaattcctggctgacaccagaatcctaaagacactcaactcagtagcaga
tttaaaaaaaattgatagacaaaaatccacagcgaaacctttaaactatc
attaataattaataagaattcaaagcagaaaaaaagatttatcctcaact
gcaagacagagaaggcagcactaattgtgtgttgtttgtataagcaaata
tatacaagttgtatgtatttgagatggaatgtatttgaaagtgtgattct
gttttgaatgagaaggtgaagggatatccaggtgccagtgactcagaatt
tatatacaagctcacactaccccaaccaaaatcttgacaggatttcccaa
gatcctgggaaaacaaatactgttgccattattcagaagaagcaacaggt
aagattatatggagattttgatgggaagaagaggaggactcatcaacatc
tggaaggcatacatttttctaaccctgttgcatagtggtctagaaagcca
gtcatgttatattggtacaagaaataatcaagctgggcagtggtggcaca
cgcctttaatcccagcacttgggaggcagagacaggctgacttctgagtt
tgaggccagcttggtctacagagtgagttccaggacagccaaggctacac
agagaaaccctgtattgaaacccaaaagaaagaagaggaggaagaaggag
gaggaggagga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8145446_8146370
seq2: B6Ng01-030O14.b_191_1101

seq1  TAGGTTGCTGATTTGTCTTATTGACTGTCCTTTGCCTTACAGAAGCTTTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGTTGCTGATTTGTCTTATTGACTGTCCTTTGCCTTACAGAAGCTTTC  50

seq1  TAGTTTCCTGAGGTCCCATTTATTAATTCTTGATCTTAGATCATGAGCCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTTTCCTGAGGTCCCATTTATTAATTCTTGATCTTAGATCATGAGCCA  100

seq1  TTGGAGTTCTGTTTAGGAAATTTCCCCCTGTGCCAATGAGTCCCTGACCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGAGTTCTGTTTAGGAAATTTCCCCCTGTGCCAATGAGTCCCTGACCT  150

seq1  CAAGCTTTACTACAGAGCAGTAGTGATAGAAACTGCATGGTATTGGTACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTTTACTACAGAGCAGTAGTGATAGAAACTGCATGGTATTGGTACA  200

seq1  GAGACAGACACGTTGATCAATGGAATAGAATTGAAGTCCCAGAAATAAAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACAGACACGTTGATCAATGGAATAGAATTGAAGTCCCAGAAATAAAA  250

seq1  CCACACACTTACAGTCACTTGATCTTTGACAAAGTCCAAAGTCACCAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACACACTTACAGTCACTTGATCTTTGACAAAGTCCAAAGTCACCAAAA  300

seq1  ATATACAATGGAAAAGAGAAAGCATCTTAAATAAATGGTGCTGGTCTAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATACAATGGAAAAGAGAAAGCATCTTAAATAAATGGTGCTGGTCTAAC  350

seq1  TGGCTGTCTGTATGTAGAAGAACAAAAATAGACTCATATTTGTCACCTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCTGTCTGTATGTAGAAGAACAAAAATAGACTCATATTTGTCACCTTG  400

seq1  TACAAAGCTGAAGTCCAAGTTGATCAAGGACCTTAACATAAAACCAGATA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGCTGAAGTCCAAGTTGATCAAGGACCTTAACATAAAACCAGATA  450

seq1  CACTGAATCTAATAGAATAGAAAGTGGGAAAGAATCTCAAAGTCCTTTCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTGAATCTAATAGAATAGAAAGTGGGAAAGAATCTCAAAGTCCTTTCT  500

seq1  ACTTCCAGAAATCTAAGAGCAAATTTCTAAGGTGGGTAACATTGTGTTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCCAGAAATCTAAGAGCAAATTTCTAAGGTGGGTAACATTGTGTTCC  550

seq1  CCTCCTCTTCTGCTCTCTGTGACTTACAGAACATCCAGTTTTGGAATCAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTCTTCTGCTCTCTGTGACTTACAGAACATCCAGTTTTGGAATCAC  600

seq1  CACACTTGCAGAGCTCCAGACAGAACAAAGAAGATGGAAACATCCCTGAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTGCAGAGCTCCAGACAGAACAAAGAAGATGGAAACATCCCTGAA  650

seq1  GTAGACTACCCTTCTGCAGCCACAGGCACACACAAAGTGAAAGTGCTAAC  700
      ||||||||||||||||||| ||||||||||||||||||||||||||| ||
seq2  GTAGACTACCCTTCTGCAG-CACAGGCACACACAAAGTGAAAGTGCT-AC  698

seq1  ACAACAGATTTGGGTACTCACCCTGGTAATGGCAAGATTTAATTTCAGCA  750
      || |||||||||||||||||||||||| ||||||||| ||||||||||||
seq2  AC-ACAGATTTGGGTACTCACCCTGGT-ATGGCAAGA-TTAATTTCAGCA  745

seq1  GAGAGCTTCCACATCACATAATGGTAGATCATTGAACTGCATTTTACTTC  800
      |||||||| |||||||||||||||||||||| ||||||||| ||||||| 
seq2  GAGAGCTT-CACATCACATAATGGTAGATCA-TGAACTGCA-TTTACTT-  791

seq1  CCCTAGCAAATAAAGTACACGGGAAAAGATTGAAAAGAACATACATTGTT  850
      ||||||||||||||||||||||| |||||||||||   |||||||||| |
seq2  CCCTAGCAAATAAAGTACACGGG-AAAGATTGAAA--GACATACATTGGT  838

seq1  TTATTGTCTTGTGAAATTGCAGGGTTTCAAGCCAATAGAATGCCTTAATG  900
      ||||||||||||| |||||||||  |||| ||| |||||||||| || ||
seq2  TTATTGTCTTGTGGAATTGCAGG--TTCAGGCC-ATAGAATGCC-TATTG  884

seq1  -CTCACGTTCTCGAGGGT-GATACAAA  925
       ||||||||||||||||| ||||||||
seq2  CCTCACGTTCTCGAGGGTGGATACAAA  911


seq1: chr16_8239900_8240610
seq2: B6Ng01-030O14.g_70_780 (reverse)

seq1  TCCTCCTCCTCCTCCTTCTTCCTCCTCTTCTTTCTTTTGGGTTTCAATAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTCCTCCTCCTCCTTCTTCCTCCTCTTCTTTCTTTTGGGTTTCAATAC  50

seq1  AGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACTCACTCTGTAGACCA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTGTGTAGCCTTGGCTGTCCTGGAACTCACTCTGTAGACCA  100

seq1  AGCTGGCCTCAAACTCAGAAGTCAGCCTGTCTCTGCCTCCCAAGTGCTGG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTGGCCTCAAACTCAGAAGTCAGCCTGTCTCTGCCTCCCAAGTGCTGG  150

seq1  GATTAAAGGCGTGTGCCACCACTGCCCAGCTTGATTATTTCTTGTACCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAAGGCGTGTGCCACCACTGCCCAGCTTGATTATTTCTTGTACCAA  200

seq1  TATAACATGACTGGCTTTCTAGACCACTATGCAACAGGGTTAGAAAAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACATGACTGGCTTTCTAGACCACTATGCAACAGGGTTAGAAAAATG  250

seq1  TATGCCTTCCAGATGTTGATGAGTCCTCCTCTTCTTCCCATCAAAATCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCCTTCCAGATGTTGATGAGTCCTCCTCTTCTTCCCATCAAAATCTC  300

seq1  CATATAATCTTACCTGTTGCTTCTTCTGAATAATGGCAACAGTATTTGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATAATCTTACCTGTTGCTTCTTCTGAATAATGGCAACAGTATTTGTT  350

seq1  TTCCCAGGATCTTGGGAAATCCTGTCAAGATTTTGGTTGGGGTAGTGTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGGATCTTGGGAAATCCTGTCAAGATTTTGGTTGGGGTAGTGTGA  400

seq1  GCTTGTATATAAATTCTGAGTCACTGGCACCTGGATATCCCTTCACCTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTATATAAATTCTGAGTCACTGGCACCTGGATATCCCTTCACCTTC  450

seq1  TCATTCAAAACAGAATCACACTTTCAAATACATTCCATCTCAAATACATA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATTCAAAACAGAATCACACTTTCAAATACATTCCATCTCAAATACATA  500

seq1  CAACTTGTATATATTTGCTTATACAAACAACACACAATTAGTGCTGCCTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACTTGTATATATTTGCTTATACAAACAACACACAATTAGTGCTGCCTT  550

seq1  CTCTGTCTTGCAGTTGAGGATAAATCTTTTTTTCTGCTTTGAATTCTTAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGTCTTGCAGTTGAGGATAAATCTTTTTTTCTGCTTTGAATTCTTAT  600

seq1  TAATTATTAATGATAGTTTAAAGGTTTCGCTGTGGATTTTTGTCTATCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATTATTAATGATAGTTTAAAGGTTTCGCTGTGGATTTTTGTCTATCAA  650

seq1  TTTTTTTTAAATCTGCTACTGAGTTGAGTGTCTTTAGGATTCTGGTGTCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTAAATCTGCTACTGAGTTGAGTGTCTTTAGGATTCTGGTGTCA  700

seq1  GCCAGGAATTC  711
      |||||||||||
seq2  GCCAGGAATTC  711


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