BAC Information

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BAC

Clone NameB6Ng01-030O16
Chromosome16 (Build37)
Map Location 60,144,110 - 60,145,188
singlet/doubletsinglet
Overlap geneEpha6
Upstream geneOlfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201, Olfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803, Mina, BC043118, LOC672884, Arl6
Downstream geneLOC100043804, EG668168, LOC668170
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-030O16.bB6Ng01-030O16.g
ACCDH860679DH860680
length1,1581,068
definitionDH860679|Mus musculus domesticus DNA, BAC clone: B6Ng01-030O16, 5' end.DH860680|Mus musculus domesticus DNA, BAC clone: B6Ng01-030O16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagaggagcacctgaaaaaatt
ttcagcatcgttaatcatcagggaaatgcaaattaaagcaaccctgagat
tccacttcacaccagtcagaatggctaagatcaaacactcagttgacagc
agatgctggtaaggatgtggagaaagaggaaccctcctccattgttggtg
ggattgaaagcttgtacaaccagtctggaaatcagtctggcggttcctca
gaaaattggacatattattactggactatcctacaatccctctcctgggc
atatatccagaagatgttcctaccggtaagaaggacacatgctcctctat
gttcatagcagccttatttataatagccagaagctggaaagaacccagat
gtccctcaacagaggaatggatacagaaaatgttgtacatttacacaatg
gagtactactcagctatataaaaagaatgaatttatgaaattcctaggca
aatgtatggacctggagggaatcatcttgagtgaggtaacccaatcacaa
aagaactcacatgatatttactcactgataagtggatattagcccagaaa
cttaaaatacccaagatacaggatacaatctgcagaacacatgaaactca
agaagaacgaagaccaaaatgtggacacttttccccttcttagaattggg
gacaaaacacccatggaaggagttccagagacaaagttaggagctgagac
gaaaggatggatcatctagagactgccatacctggggatccatctcataa
tcagcctccaaacgctgacaccgttgcatacactagcaagattttgctga
aaggacccagatatagctgtctcttgtgaggctgttcttgggcctagcaa
acacagaagtggatgctcacagtcagttattggatggatcacaggcccca
tgagcagctagagaattacccagagctaaagcgtaaacaaccctatagtg
gaacatcatatgaactactagtaccacccgaagctcgtgttctctagctg
catgtttagaagatgctagttgccatcttggaaagaggcccattgcttgc
aactttatatgtctcagtcagggaagacatgccagaatggtatgtggtgt
tagtgata
gaattcttgaaaacttgagttggtttaatgccaatagagaaagcagtact
gcaatacttgaaacttcacttccctgtcttagtgcaagagcactgtaagt
gcaaacagtagcaagtgtaacctcagtgaaggtgaaatagctgtggatgt
gttggataaacaccttgaatgaaaggcagtatgctgttaccaatcttcat
cttacaatagaagagcaagctccgaagcctcagagtatgcccataaaaca
gatgatgtttctgacttacatttgatgaagcatgtgcatgcatacgtgca
tacacatacacaattagtgcttaggatcaatcattctgtcgttttgacta
tcaggaaaaaatgtaccttatcccggaatctggactattttcttgtttat
tctctgtgatgactggatagtctctttaactctgtactgatgatttcctg
gattgtcagggtgacagagttcagggcaaaactcgttggcttgaaacgtg
agcttgtctgtttgaaaccttacattctgatgctgacgaaaacaatacca
agctatctttgccaaatttccctgacattttgggtttccctcatgatatt
ctcgaagattatattttgtgataatccttaaatggtgtatccctctcaaa
aagggtcactggaagcatcactctttgtaatacgtgaacacttaccatcc
tggaggtatgaaatgtaagcttgcctgagcagcttttgagatctgcttgc
cagctcctagtcatcccagtggtgataccagtaacagcttccagtcctgg
caaggaacagttgtctatcttatcctattacttggagattatcaggcctt
ggcaggaatgctaaaacagaagatgacaaattctagggaggaaacacggt
ttgactttcatatgtctgctatgtttatcataatacaaaatgtcatttga
gctgtgtcaaaatgtctgcttgtttcctataatttagttaaaacatcccc
aagtacagaatatagagtagtagtttgttatttcattacttgtgatttac
agcaatttttattcttac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60144110_60145188
seq2: B6Ng01-030O16.g_69_1136 (reverse)

seq1  GTAAGAAATTAAAAATTGCTGTTAAATCACAAGTAATGAAATAACAAACA  50
      |||||||  |||||||||||| ||||||||||||||||||||||||||| 
seq2  GTAAGAA--TAAAAATTGCTG-TAAATCACAAGTAATGAAATAACAAAC-  46

seq1  TACCTACTCTATATTCTGTACTTGGGGATGTTTTAACTAAATTATAGGAA  100
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  TA-CTACTCTATATTCTGTACTTGGGGATGTTTTAACTAAATTATAGGAA  95

seq1  ACAAGCAGACATTTTTGACACAGCTCAAATGAACATTTTGTATTATGAAT  150
      ||||||||||| ||||||||||||||||||| ||||||||||||||| ||
seq2  ACAAGCAGACA-TTTTGACACAGCTCAAATG-ACATTTTGTATTATG-AT  142

seq1  AAACATAGCAGACAATATTGAAAGTCAAACCGTGTTTCCTCCCTAGAATT  200
      ||||||||||||| ||| ||||||||||||||||||||||||||||||||
seq2  AAACATAGCAGAC-ATA-TGAAAGTCAAACCGTGTTTCCTCCCTAGAATT  190

seq1  TGTCATCTTCTGTTTTAGCATTCCTTGCCAAGGCCTGATAATCTCCAAGT  250
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  TGTCATCTTCTGTTTTAGCATTCC-TGCCAAGGCCTGATAATCTCCAAGT  239

seq1  AATAGGATAAGATAGACAACTGTTCCTTGCCAGGACTGGAAGCTGTTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGGATAAGATAGACAACTGTTCCTTGCCAGGACTGGAAGCTGTTACT  289

seq1  GGTATCACCACTGGGATGACTAGGAGCTGGCAAGCAGATCTCAAAAGCTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTATCACCACTGGGATGACTAGGAGCTGGCAAGCAGATCTCAAAAGCTG  339

seq1  CTCAGGCAAGCTTACATTTCATACCTCCAGGATGGTAAGTGTTCACGTAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGGCAAGCTTACATTTCATACCTCCAGGATGGTAAGTGTTCACGTAT  389

seq1  TACAAAGAGTGATGCTTCCAGTGACCCTTTTTGAGAGGGATACACCATTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAAAGAGTGATGCTTCCAGTGACCCTTTTTGAGAGGGATACACCATTT  439

seq1  AAGGATTATCACAAAATATAATCTTCGAGAATATCATGAGGGAAACCCAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGATTATCACAAAATATAATCTTCGAGAATATCATGAGGGAAACCCAA  489

seq1  AATGTCAGGGAAATTTGGCAAAGATAGCTTGGTATTGTTTTCGTCAGCAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTCAGGGAAATTTGGCAAAGATAGCTTGGTATTGTTTTCGTCAGCAT  539

seq1  CAGAATGTAAGGTTTCAAACAGACAAGCTCACGTTTCAAGCCAACGAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAATGTAAGGTTTCAAACAGACAAGCTCACGTTTCAAGCCAACGAGTT  589

seq1  TTGCCCTGAACTCTGTCACCCTGACAATCCAGGAAATCATCAGTACAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCCCTGAACTCTGTCACCCTGACAATCCAGGAAATCATCAGTACAGAG  639

seq1  TTAAAGAGACTATCCAGTCATCACAGAGAATAAACAAGAAAATAGTCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAGAGACTATCCAGTCATCACAGAGAATAAACAAGAAAATAGTCCAG  689

seq1  ATTCCGGGATAAGGTACATTTTTTCCTGATAGTCAAAACGACAGAATGAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCGGGATAAGGTACATTTTTTCCTGATAGTCAAAACGACAGAATGAT  739

seq1  TGATCCTAAGCACTAATTGTGTATGTGTATGCACGTATGCATGCACATGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATCCTAAGCACTAATTGTGTATGTGTATGCACGTATGCATGCACATGC  789

seq1  TTCATCAAATGTAAGTCAGAAACATCATCTGTTTTATGGGCATACTCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATCAAATGTAAGTCAGAAACATCATCTGTTTTATGGGCATACTCTGA  839

seq1  GGCTTCGGAGCTTGCTCTTCTATTGTAAGATGAAGATTGGTAACAGCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCGGAGCTTGCTCTTCTATTGTAAGATGAAGATTGGTAACAGCATA  889

seq1  CTGCCTTTCATTCAAGGTGTTTATCCAACACATCCACAGCTATTTCACCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCTTTCATTCAAGGTGTTTATCCAACACATCCACAGCTATTTCACCT  939

seq1  TCACTGAGGTTACACTTGCTACTGTTTGCACTTACAGTGCTCTTGCACTA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGAGGTTACACTTGCTACTGTTTGCACTTACAGTGCTCTTGCACTA  989

seq1  AGACAGGGAAGTGAAGTTTCAAGTATTGCAGTACTGCTTTCTCTATTGGC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACAGGGAAGTGAAGTTTCAAGTATTGCAGTACTGCTTTCTCTATTGGC  1039

seq1  ATTAAACCAACTCAAGTTTTCAAGAATTC  1079
      |||||||||||||||||||||||||||||
seq2  ATTAAACCAACTCAAGTTTTCAAGAATTC  1068