BAC Information

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BAC

Clone NameB6Ng01-031P22
Chromosome16 (Build37)
Map Location 60,855,545 - 60,856,675
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha6, LOC100043804, EG668168, LOC668170
Downstream geneLOC100043524, LOC668183
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-031P22.bB6Ng01-031P22.g
ACCDH861457DH861458
length1,1591,105
definitionDH861457|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P22, 5' end.DH861458|Mus musculus domesticus DNA, BAC clone: B6Ng01-031P22, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcatcttggtagatttttcctttgagtatgaagtgtccttccttat
ctttttaaataactgttggttgaaagttgattttattagatattagagtg
ataactccagcttgtttcttgggactatttgcttggaaaattgtttttca
gccttttcttctgagatagtgtcagcctttgtcactgaagtgggtttcct
gtatgcagcaaaatgctgtgcccagtctgttagtgtatgtctttttattg
gggacttgagtccattgatattaaggggtattaaggaaaagtgactgttg
cttcttgttattgttagaggtgtaattacgtttgtgtggaagatttgggt
ttattgaaagattactttcttgctttttctagggtgtagtttccctcttt
gtgttgaagtttccatctatttcctttgtagagctggatttatagaaaga
tattgggtaaatttgtttttgccatggaatctcttggtttcatcatctat
gttaactgaaagctttgctgggtatagtagcctgggctggcatttctgtt
cttttagggtctgatgacatcttcccaggatcttttggcttgtatagtct
ctgatgagaatctggcataattctgataggtctgcttttatgtgttcctt
gaccatttccccttactgcagaacttgtgcaggcagtaagggcagttcca
caatattcagaggaagcttgactcccaggtgcttctaatatgcccaagat
cacaggagaggccacaacattggccccaacacctgaagtactgtgtctcc
tagacacagggacatacaagagttctagagaatgcacaactggaccaaaa
aagaagttcatcctgtcccatataatcaaaacatcaatgtacaaaataaa
gaaagaactcctgcccaaccatggcatggttctttctgaacctacaccca
gagcagacctgaagggttggctttgcacccactctaaaatctcaatggga
gactgactcccaaatggttccggaatgcccaggatactggaatacagatc
acaaaggaagtccaaccttgcacaatcaaacacccaggaacacggaacct
taacacactcaaatgcaacctatgctcaaatactttctcacatctagtga
gccgtgaac
gaattcacaaatggttagcatagtaaagctatccctagactggagaatgt
aggtctggcatgatcatttaggggctgtgatcatagagtatggttgcaat
gaaactaaggtttaggaggagctgtgggcagggattaaaccctgagttct
cttgtactgtacattacctggatgactcagagcatccttgacttttattt
tttacttttatttatttttttcaattaggagtctaagtagcactgagaag
tcactggcccatcagctggagaaggacaataaagatgagaaaaaaacaag
ttgtaattttcatgctgtagaaagtcaaggacctgggtctggaaggaaaa
ggaaagcatataagatctgtcatagccttgaagaaaaggataaaacattt
ctactgttctctagctctttggagaaacagattcatttaccaacaactag
taaatggttttgaaagccagacttgcatacacacacacacacacacacac
acacacacacacacacacacacagacattaggtaccattttaaagaaact
tgctggatggggagtaagcaacattttgataagcttcagttttctcctaa
taaacaacagctgccatgggtgccaaatgaaattgttctgcatttctgtt
cccagaatttggaaactgtgatttggcatcgctagggtcaagtactacaa
cttgagttcagaacctgaccaagaaagattgatctgagaaaaggcaattc
tcctgtaaactttgctgtttcttctcatgttatgatcctaaaaaggttcc
tttttaattttattaattatttatgggttatatactttttatccatgtca
catgtatgcacacacatatatgcagatgtacgcacatatatatgcagatg
tataatacgagtgaataattgaagtattcccatttttcttttaaattata
tttgtgttcttctggccttagtgtctgaaaaataattcaaagaattagaa
cattggagtttatttattatttgaatgtgaggttttataaccacatacac
caagccatgctcccttcaatgaatttggtggttaatcctgaacatagatt
tcaat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_60855545_60856675
seq2: B6Ng01-031P22.g_69_1173

seq1  GAATTCACAAATGGTTAGCATAGTAAAGCTATCCCTAGACTGGAGAATGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACAAATGGTTAGCATAGTAAAGCTATCCCTAGACTGGAGAATGT  50

seq1  AGGTCTGGCATGATCATTTAGGGGCTGTGATCATAGAGTATGGTTGCAAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCTGGCATGATCATTTAGGGGCTGTGATCATAGAGTATGGTTGCAAT  100

seq1  GAAACTAAGGTTTAGGAGGAGCTGTGGGCAGGGATTAAACCCTGAGTTCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAAGGTTTAGGAGGAGCTGTGGGCAGGGATTAAACCCTGAGTTCT  150

seq1  CTTGTACTGTACATTACCTGGATGACTCAGAGCATCCTTGACTTTTATTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGTACTGTACATTACCTGGATGACTCAGAGCATCCTTGACTTTTATTT  200

seq1  TTTACTTTTATTTATTTTTTTCAATTAGGAGTCTAAGTAGCACTGAGAAG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTTTTATTTATTTTTTTCAATTAGGAGTCTAAGTAGCACTGAGAAG  250

seq1  TCACTGGCCCATCAGCTGGAGAAGGACAATAAAGATGAGAAAAAAACAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACTGGCCCATCAGCTGGAGAAGGACAATAAAGATGAGAAAAAAACAAG  300

seq1  TTGTAATTTTCATGCTGTAGAAAGTCAAGGACCTGGGTCTGGAAGGAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTAATTTTCATGCTGTAGAAAGTCAAGGACCTGGGTCTGGAAGGAAAA  350

seq1  GGAAAGCATATAAGATCTGTCATAGCCTTGAAGAAAAGGATAAAACATTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAAGCATATAAGATCTGTCATAGCCTTGAAGAAAAGGATAAAACATTT  400

seq1  CTACTGTTCTCTAGCTCTTTGGAGAAACAGATTCATTTACCAACAACTAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTACTGTTCTCTAGCTCTTTGGAGAAACAGATTCATTTACCAACAACTAG  450

seq1  TAAATGGTTTTGAAAGCCAGACTTGCATACACACACACACACACACACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAATGGTTTTGAAAGCCAGACTTGCATACACACACACACACACACACAC  500

seq1  ACACACACACACACACACACACAGACATTAGGTACCATTTTAAAGAAACT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACAGACATTAGGTACCATTTTAAAGAAACT  550

seq1  TGCTGGATGGGGAGTAAGCAACATTTTGATAAGCTTCAGTTTTCTCCTAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGGATGGGGAGTAAGCAACATTTTGATAAGCTTCAGTTTTCTCCTAA  600

seq1  TAAACAACAGCTGCCATGGGTGCCAAATGAAATTGTTCTGCATTTCTGTT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAACAACAGCTGCCATGGGTGCCAAATGAAATTGTTCTGCATTTCTGTT  650

seq1  CCCAGAATTTGGAAACTGTGATTTGGCATCGCTAGGGTCAAGTACTACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATTTGGAAACTGTGATTTGGCATCGCTAGGGTCAAGTACTACAA  700

seq1  CTTGAGTTCAGAACCTGACCAAGAAAGATTGATCTGAGAAAAGGCAATTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAGTTCAGAACCTGACCAAGAAAGATTGATCTGAGAAAAGGCAATTC  750

seq1  TCCTGTAAACTTTGCTGTTTCTTCTCATGTTATGATCCTAAAAGGTTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||| | ||||
seq2  TCCTGTAAACTTTGCTGTTTCTTCTCATGTTATGATCCTAAAAAGGTTCC  800

seq1  TTTTTAATTTTTATTAATTATTTAT-GGTTATATTACTTTTTATCCATGT  849
      ||||||| ||||||||||||||||| ||||||| ||||||||||||||||
seq2  TTTTTAA-TTTTATTAATTATTTATGGGTTATA-TACTTTTTATCCATGT  848

seq1  CACATGTATGCACACACATATATGCAGATGTACGCACATATATATGCAGA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATGTATGCACACACATATATGCAGATGTACGCACATATATATGCAGA  898

seq1  TGTATAAATAACAAGTGAAATAAATTGAAGTATTCCCATTTTTCTTTTTA  949
      |||||||   || ||||||   |||||||||||||||||||||| |||||
seq2  TGTATAA--TACGAGTGAA--TAATTGAAGTATTCCCATTTTTC-TTTTA  943

seq1  AATTAATTATTTGTGTTTTTTCTGGCTTTAGTGTTCTTGGAAAAATATAT  999
      |||||  |||||||| || ||||||| |||||| |||  |||||||| ||
seq2  AATTA--TATTTGTG-TTCTTCTGGCCTTAGTG-TCT--GAAAAATA-AT  986

seq1  TCAAAGAAATTAGAACATT-GAGTTTATTTATTATTTGATATGTGAGGTT  1048
      |||||| |||||||||||| ||||||||||||||||||| ||||||||||
seq2  TCAAAG-AATTAGAACATTGGAGTTTATTTATTATTTGA-ATGTGAGGTT  1034

seq1  TTATAAACACACATACACACAAGCACATGCTCCACTTCAATTTGAATTTT  1098
      ||||||   ||||||||| ||||| |||||||| ||||||  ||||||| 
seq2  TTATAA--CCACATACAC-CAAGC-CATGCTCC-CTTCAA--TGAATTTG  1077

seq1  GTTGTTTAGTTTCTGAACATATGTATTTTCAAT  1131
      || ||| |  | |||||||||     |||||||
seq2  GTGGTTAA--TCCTGAACATA---GATTTCAAT  1105