BAC Information

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BAC

Clone NameB6Ng01-034I11
Chromosome16 (Build37)
Map Location 37,889,582 - 37,926,656
singlet/doubletdoublet
Overlap geneGpr156, LOC100043271
Upstream geneGolgb1, Hcls1, Fbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58
Downstream geneLOC100043713, Gsk3b, Nr1i2, 4932425I24Rik, Cox17, LOC100043715, Popdc2, Pla1a, Adprh, Cd80, LOC667353, Ck-ps3, 4930455C21Rik, 9630046K23Rik, Tmem39a, Cdgap, B4galt4, LOC100043289, Upk1b, 4930435E12Rik, Igsf11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-034I11.bB6Ng01-034I11.g
ACCDH863255DH863256
length1,019592
definitionDH863255|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I11, 5' end.DH863256|Mus musculus domesticus DNA, BAC clone: B6Ng01-034I11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,889,582 - 37,890,626)(37,926,065 - 37,926,656)
sequence
gaattccactgagtttaaccaaggctggctgtgaccatgtgggcatgcca
tgcatttagaactatccattggagcatggtggactcagtagtaggtacaa
aactggaaaaacaacgcctcaagtcttaccagttataactagtttggcag
taagtggggccccatgcaagttgacagggccagccttggctcagggcaag
taatggctgctgttcataattgtaatcacgatttgaagtctgatgggaga
acttagagaaaaggaaacatctggataactacaaagaatgaaaagctcac
ttcttttaatccgttactagcactgagctaatactagaaatagttgaact
aaagatctaaacaccagctttgtgaaaagagaactcagctgcttacattc
ttaaattgagtgtaaccaatcaaaagcccaggcttccctgtggtaaatga
gcagacagccaacacagatcaagtcttaagcccccgaatactgctctgtg
aggagatctgaactggtaatttctagattgcccatctaagcaggtgagtt
ttccatctctttctcactgagaaaggggcttgctctgggcagatgttctt
aggtttttaagcctaaggcttgataattgtagaggagagtaggagtatgc
aggactcatccctagaacaatttaatcctaatctctgaatatactttcac
cttaagcgatttggttgcctagcaaggatgacagataatgatttggcgaa
atccccttgtgaggacttgaggttgagagactatggtgtttcttgagaaa
gtaatgaagtaatttgcctaagttctcctagacagtgacagagctagcac
tagatgcatctatcaaaatatttagagctgagggatggatcagcagttaa
gaatgtgttctgctctccggaggacatgtgtcaataccataccactcagg
cagctctgctcaacaattgcatccaatcaggttcaccacagcacacatgc
catactataataaaatgtt
gaattcaacatggttaacatttttaaaggatcagatattttataattgca
aggaagaccagcccctcctggcccccgagctcagtgggacatgtggtttt
ctggcatgtgctttcaattgatctgagtggacaaaggtaaagaggcgctt
ctcctggagagaggactggcctggtgtcattcaacagaagccaattaaag
cacagaatcgacagtgctactggacaaaccaagcggtcgtgaaacgataa
tcatatctactccctcaatgcctcagctacagagcctcccaggaggctgc
tagagccctgtgcagccggcaaagacatgcatgagaatagcccaggcttt
tgtctgtgaatagcccaccactccaactactgacagccttttctggcacc
gcttgcttcctccagagatgagatgcacagagctggcccagcctctgcag
gaattcacatgaaactgtggagagacacaactgcccaggcttggagtgtc
tgtgacttcattctcttactttcattctaatggacacattcgggatcttc
agcgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_37889582_37890626
seq2: B6Ng01-034I11.b_47_1065

seq1  GAATTCCACTGAGTTTAACCAAGGCTGGCTGTGACCATGTGGGCATGCCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACTGAGTTTAACCAAGGCTGGCTGTGACCATGTGGGCATGCCA  50

seq1  TGCATTTAGAACTATCCATTGGAGCATGGTGGACTCAGTAGTAGGTACAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTTAGAACTATCCATTGGAGCATGGTGGACTCAGTAGTAGGTACAA  100

seq1  AACTGGAAAAACAACGCCTCAAGTCTTACCAGTTATAACTAGTTTGGCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGAAAAACAACGCCTCAAGTCTTACCAGTTATAACTAGTTTGGCAG  150

seq1  TAAGTGGGGCCCCATGCAAGTTGACAGGGCCAGCCTTGGCTCAGGGCAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGTGGGGCCCCATGCAAGTTGACAGGGCCAGCCTTGGCTCAGGGCAAG  200

seq1  TAATGGCTGCTGTTCATAATTGTAATCACGATTTGAAGTCTGATGGGAGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATGGCTGCTGTTCATAATTGTAATCACGATTTGAAGTCTGATGGGAGA  250

seq1  ACTTAGAGAAAAGGAAACATCTGGATAACTACAAAGAATGAAAAGCTCAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTAGAGAAAAGGAAACATCTGGATAACTACAAAGAATGAAAAGCTCAC  300

seq1  TTCTTTTAATCCGTTACTAGCACTGAGCTAATACTAGAAATAGTTGAACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTTTTAATCCGTTACTAGCACTGAGCTAATACTAGAAATAGTTGAACT  350

seq1  AAAGATCTAAACACCAGCTTTGTGAAAAGAGAACTCAGCTGCTTACATTC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGATCTAAACACCAGCTTTGTGAAAAGAGAACTCAGCTGCTTACATTC  400

seq1  TTAAATTGAGTGTAACCAATCAAAAGCCCAGGCTTCCCTGTGGTAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAATTGAGTGTAACCAATCAAAAGCCCAGGCTTCCCTGTGGTAAATGA  450

seq1  GCAGACAGCCAACACAGATCAAGTCTTAAGCCCCCGAATACTGCTCTGTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGACAGCCAACACAGATCAAGTCTTAAGCCCCCGAATACTGCTCTGTG  500

seq1  AGGAGATCTGAACTGGTAATTTCTAGATTGCCCATCTAAGCAGGTGAGTT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGATCTGAACTGGTAATTTCTAGATTGCCCATCTAAGCAGGTGAGTT  550

seq1  TTCCATCTCTTTCTCACTGAGAAAGGGGCTTGCTCTGGGCAGATGTTCTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCATCTCTTTCTCACTGAGAAAGGGGCTTGCTCTGGGCAGATGTTCTT  600

seq1  AGGTTTTTAAGCCTAAGGCTTGATAATTGTAGAGGAGAGTAGGAGTATGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTTAAGCCTAAGGCTTGATAATTGTAGAGGAGAGTAGGAGTATGC  650

seq1  AGGACTCATCCCTAGAACAATTTAATCCTAATCTCTGAATATACTTTCAC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTCATCCCTAGAACAATTTAATCCTAATCTCTGAATATACTTTCAC  700

seq1  CTTAAGCGATTTGGTTGCCTAGCAAGGATGACAGATAATGATTTGGCGAA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGCGATTTGGTTGCCTAGCAAGGATGACAGATAATGATTTGGCGAA  750

seq1  ATCCCCTTGTGAGGACTTGAGGTTGAGAGACTATGGTGTTTCTTGAGAAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCCTTGTGAGGACTTGAGGTTGAGAGACTATGGTGTTTCTTGAGAAA  800

seq1  GTAATGAAGTAATTTGCCTAAGTTCTCCTAGACAGTGACAGAGCTAGCAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAATGAAGTAATTTGCCTAAGTTCTCCTAGACAGTGACAGAGCTAGCAC  850

seq1  TAGAATGCATCTATCAAAAAATATTTTAGGAGCTGGAGGGATGGATCAGC  900
      ||| |||||||||||  |||||||||   ||||| |||||||||||||||
seq2  TAG-ATGCATCTATC--AAAATATTT--AGAGCT-GAGGGATGGATCAGC  894

seq1  AGTTAAGAATGTGTTCTGCTCTTCCAGAGGACATGTGTTCAATACCCAAT  950
      ||||||||||||||||||||| ||| ||||||||||| ||||||||  ||
seq2  AGTTAAGAATGTGTTCTGCTC-TCCGGAGGACATGTG-TCAATACC--AT  940

seq1  ACCCACCTCAGGCAGCTTCTGGCCTCAAACATCTGCATTCACATGCAGGT  1000
      |||   |||||||||| ||||  ||| ||||  ||||| || || |||||
seq2  ACC--ACTCAGGCAGC-TCTG--CTC-AACAATTGCATCCA-AT-CAGGT  982

seq1  ATCCACACACAAGCACACATGCCCATACATATAATTAAAAATGTT  1045
       ||  |||   |||||||||| |||||| ||||||  ||||||||
seq2  -TCACCAC---AGCACACATG-CCATAC-TATAAT--AAAATGTT  1019

seq1: chr16_37926065_37926656
seq2: B6Ng01-034I11.g_68_659 (reverse)

seq1  CACACACACACACACACACACACACACACACACACACACGCTGAAGATCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACACACACACACACACACACACACACACACACACACGCTGAAGATCC  50

seq1  CGAATGTGTCCATTAGAATGAAAGTAAGAGAATGAAGTCACAGACACTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGTGTCCATTAGAATGAAAGTAAGAGAATGAAGTCACAGACACTCC  100

seq1  AAGCCTGGGCAGTTGTGTCTCTCCACAGTTTCATGTGAATTCCTGCAGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCTGGGCAGTTGTGTCTCTCCACAGTTTCATGTGAATTCCTGCAGAG  150

seq1  GCTGGGCCAGCTCTGTGCATCTCATCTCTGGAGGAAGCAAGCGGTGCCAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGGCCAGCTCTGTGCATCTCATCTCTGGAGGAAGCAAGCGGTGCCAG  200

seq1  AAAAGGCTGTCAGTAGTTGGAGTGGTGGGCTATTCACAGACAAAAGCCTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGGCTGTCAGTAGTTGGAGTGGTGGGCTATTCACAGACAAAAGCCTG  250

seq1  GGCTATTCTCATGCATGTCTTTGCCGGCTGCACAGGGCTCTAGCAGCCTC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTCTCATGCATGTCTTTGCCGGCTGCACAGGGCTCTAGCAGCCTC  300

seq1  CTGGGAGGCTCTGTAGCTGAGGCATTGAGGGAGTAGATATGATTATCGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGAGGCTCTGTAGCTGAGGCATTGAGGGAGTAGATATGATTATCGTT  350

seq1  TCACGACCGCTTGGTTTGTCCAGTAGCACTGTCGATTCTGTGCTTTAATT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACGACCGCTTGGTTTGTCCAGTAGCACTGTCGATTCTGTGCTTTAATT  400

seq1  GGCTTCTGTTGAATGACACCAGGCCAGTCCTCTCTCCAGGAGAAGCGCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTCTGTTGAATGACACCAGGCCAGTCCTCTCTCCAGGAGAAGCGCCT  450

seq1  CTTTACCTTTGTCCACTCAGATCAATTGAAAGCACATGCCAGAAAACCAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTACCTTTGTCCACTCAGATCAATTGAAAGCACATGCCAGAAAACCAC  500

seq1  ATGTCCCACTGAGCTCGGGGGCCAGGAGGGGCTGGTCTTCCTTGCAATTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCCACTGAGCTCGGGGGCCAGGAGGGGCTGGTCTTCCTTGCAATTA  550

seq1  TAAAATATCTGATCCTTTAAAAATGTTAACCATGTTGAATTC  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATATCTGATCCTTTAAAAATGTTAACCATGTTGAATTC  592