BAC Information

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BAC

Clone NameB6Ng01-035B18
Chromosome16 (Build37)
Map Location 57,124,711 - 57,254,416
singlet/doubletdoublet
Overlap geneTomm70a, Nit2, Tbc1d23
Upstream geneSenp7, Impg2, LOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik
Downstream geneTmem30c, 2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342, LOC100043477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035B18.bB6Ng01-035B18.g
ACCDH863669DH863670
length9681,033
definitionDH863669|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B18, 5' end.DH863670|Mus musculus domesticus DNA, BAC clone: B6Ng01-035B18, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(57,253,866 - 57,254,416)(57,124,711 - 57,125,756)
sequence
gaattcttttgttgttgttgtttttttattttggtttggttttttgttgt
ttgtttttgtttttcgagacagggtttctctgtgtagccctggctgtcct
ggaactcactctgtagaccaggccggccttgaactcagacatctgcctgc
ctctgcctcctaagtgctgggattaaaggcttgcactatcactgcccggc
tactttttttttttaagatttatttattattatatctaagtacactgtag
ctgtcttcagatgtaccagaagagggtgtcagatctcattacaggtggtt
gtgagataccatgtggttgctgggatttgaacccaggaccttctgaagag
cagtcagtgttcttacctgctgagccatctcgccagtccaagggatggaa
attctaaaccagggatgggcaatgaggacattgtcacaactgacataagc
cagttacagaaacaagacacacactggatgatcccactaacattagatag
ccaaaatagattcatggagacagaatttggttatcaggggctgggtagag
agaaggatgcatgactgctattaatgggcaaaggggagcacacatatgct
gctgcacatttgtggaggtcagaagacttgcaggtgattcattccttaga
ccatggctcaagggatggggcttgggtcattaggcttggtggcaatcacc
tttatctcctgagtcacattgccagccacctggattgaatttctaaacat
tcattaaggcaaaggcaggcacacgtatacacggacacaccctcctcagg
actggcatgctgtacttgcaatttggatgccgataccaaaagctacttct
gaggggatgcttgtgcatatcctaagtactattacaggccaagtatcaga
aggagatgcagtgcagcctgggagtgctcagtgggtaagtgctgctgtgt
acatgatcaagttgtatc
gaattctctgctttaaaatggttattatatttgtcccaaaataaaactga
gcaaaacacttgaacatgccattttttttttaacctcaccatgtagaatt
taggaatatggtcctgaaatcttacttggaattactaaattattgtttag
caaggcaatattaagaatcattattttctagtggaaattatattcttaag
tgttggtagagagtcatatttgactcttacgagtgtctgtgtataactga
tataactgatataactgcgtataactcatccgtatttcctatggctgaag
gactccctctgcgttagctctgcattgtctcagctgaaggtacaacaggc
tttctaggtgctgtgtctccagctgcacaataactaccttttttttttaa
caggattaaggaattaccagatatctattcagggttcagtgttagcagac
tgaaaagaaaacctgtttagttttgtctttgggcttaatgtttgcccaaa
tataaaatgaaccagtggtagatgttcccccgtgtaacatgggccatgtc
cagttatcacttgcaaaagcttggaagaaaaatgcaaacctgttcatgtt
ggtttcaagatatttaaagaaaacatctgacagttgatagtttgtaagag
tgagggtaaaatattaaaaccatgctccatttaaatagttgtaaaattta
ccagtgttctgtcttactctagtagtttttttcaaacttgaattacagat
tttcatcattgggaaatttcttactttagaaatttcactttctcacttct
gatttgagctacctcagatgaataacaaatacacactaagcctagtgtcc
tagtggcttctaatagtatgcactagcttaagagcagtatcatttcataa
cttattatttcctagtaatttaaaaaaaaatatttattattattatttat
ttattattatatatgtaagtacactgtagctgtcttcagatgcactccag
agagggcattagacttgtttggatggtgtgagc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57253866_57254416
seq2: B6Ng01-035B18.b_44_594 (reverse)

seq1  TCTCTACCCAGCCCCTGATAACCAAATTCTGTCTCCATGAATCTATTTTG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCTACCCAGCCCCTGATAACCAAATTCTGTCTCCATGAATCTATTTTG  50

seq1  GCTATCTAATGTTAGTGGGATCATCCAGTGTGTGTCTTGTTTCTGTAACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTATCTAATGTTAGTGGGATCATCCAGTGTGTGTCTTGTTTCTGTAACT  100

seq1  GGCTTATGTCAGTTGTGACAATGTCCTCATTGCCCATCCCTGGTTTAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTTATGTCAGTTGTGACAATGTCCTCATTGCCCATCCCTGGTTTAGAA  150

seq1  TTTCCATCCCTTGGACTGGCGAGATGGCTCAGCAGGTAAGAACACTGACT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCATCCCTTGGACTGGCGAGATGGCTCAGCAGGTAAGAACACTGACT  200

seq1  GCTCTTCAGAAGGTCCTGGGTTCAAATCCCAGCAACCACATGGTATCTCA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCTTCAGAAGGTCCTGGGTTCAAATCCCAGCAACCACATGGTATCTCA  250

seq1  CAACCACCTGTAATGAGATCTGACACCCTCTTCTGGTACATCTGAAGACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACCACCTGTAATGAGATCTGACACCCTCTTCTGGTACATCTGAAGACA  300

seq1  GCTACAGTGTACTTAGATATAATAATAAATAAATCTTAAAAAAAAAAAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTACAGTGTACTTAGATATAATAATAAATAAATCTTAAAAAAAAAAAGT  350

seq1  AGCCGGGCAGTGATAGTGCAAGCCTTTAATCCCAGCACTTAGGAGGCAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCGGGCAGTGATAGTGCAAGCCTTTAATCCCAGCACTTAGGAGGCAGA  400

seq1  GGCAGGCAGATGTCTGAGTTCAAGGCCGGCCTGGTCTACAGAGTGAGTTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGGCAGATGTCTGAGTTCAAGGCCGGCCTGGTCTACAGAGTGAGTTC  450

seq1  CAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACAAAAACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGACAGCCAGGGCTACACAGAGAAACCCTGTCTCGAAAAACAAAAACA  500

seq1  AACAACAAAAAACCAAACCAAAATAAAAAAACAACAACAACAAAAGAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAACAAAAAACCAAACCAAAATAAAAAAACAACAACAACAAAAGAATT  550

seq1  C  551
      |
seq2  C  551

seq1: chr16_57124711_57125756
seq2: B6Ng01-035B18.g_68_1100

seq1  GAATTCTCTGCTTTAAAATGGTTATTATATTTGTCCCAAAATAAAACTGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTGCTTTAAAATGGTTATTATATTTGTCCCAAAATAAAACTGA  50

seq1  GCAAAACACTTGAACATGCCATTTTTTTTTTAACCTCACCATGTAGAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAAACACTTGAACATGCCATTTTTTTTTTAACCTCACCATGTAGAATT  100

seq1  TAGGAATATGGTCCTGAAATCTTACTTGGAATTACTAAATTATTGTTTAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAATATGGTCCTGAAATCTTACTTGGAATTACTAAATTATTGTTTAG  150

seq1  CAAGGCAATATTAAGAATCATTATTTTCTAGTGGAAATTATATTCTTAAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGCAATATTAAGAATCATTATTTTCTAGTGGAAATTATATTCTTAAG  200

seq1  TGTTGGTAGAGAGTCATATTTGACTCTTACGAGTGTCTGTGTATAACTGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGGTAGAGAGTCATATTTGACTCTTACGAGTGTCTGTGTATAACTGA  250

seq1  TATAACTGATATAACTGCGTATAACTCATCCGTATTTCCTATGGCTGAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAACTGATATAACTGCGTATAACTCATCCGTATTTCCTATGGCTGAAG  300

seq1  GACTCCCTCTGCGTTAGCTCTGCATTGTCTCAGCTGAAGGTACAACAGGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTCCCTCTGCGTTAGCTCTGCATTGTCTCAGCTGAAGGTACAACAGGC  350

seq1  TTTCTAGGTGCTGTGTCTCCAGCTGCACAATAACTACCTTTTTTTTTTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAGGTGCTGTGTCTCCAGCTGCACAATAACTACCTTTTTTTTTTAA  400

seq1  CAGGATTAAGGAATTACCAGATATCTATTCAGGGTTCAGTGTTAGCAGAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGATTAAGGAATTACCAGATATCTATTCAGGGTTCAGTGTTAGCAGAC  450

seq1  TGAAAAGAAAACCTGTTTAGTTTTGTCTTTGGGCTTAATGTTTGCCCAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAGAAAACCTGTTTAGTTTTGTCTTTGGGCTTAATGTTTGCCCAAA  500

seq1  TATAAAATGAACCAGTGGTAGATGTTCCCCCGTGTAACATGGGCCATGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAAAATGAACCAGTGGTAGATGTTCCCCCGTGTAACATGGGCCATGTC  550

seq1  CAGTTATCACTTGCAAAAGCTTGGAAGAAAAATGCAAACCTGTTCATGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTTATCACTTGCAAAAGCTTGGAAGAAAAATGCAAACCTGTTCATGTT  600

seq1  GGTTTCAAGATATTTAAAGAAAACATCTGACAGTTGATAGTTTGTAAGAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTCAAGATATTTAAAGAAAACATCTGACAGTTGATAGTTTGTAAGAG  650

seq1  TGA-GGTAAAATATT-AAACCATGCTCCATTTAAATAGTTGTAAAATTTA  698
      ||| ||||||||||| ||||||||||||||||||||||||||||||||||
seq2  TGAGGGTAAAATATTAAAACCATGCTCCATTTAAATAGTTGTAAAATTTA  700

seq1  CCAGTGTTCTGTCTTACTCTAGTAGTTTTTTTCAAACTTGAATTACAGAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTCTGTCTTACTCTAGTAGTTTTTTTCAAACTTGAATTACAGAT  750

seq1  TTTCATCATTGGGAAATTTCTTACTTTAGAAATTTCAC-TTCTCACTCTA  797
      |||||||||||||||||||||||||||||||||||||| ||||||||   
seq2  TTTCATCATTGGGAAATTTCTTACTTTAGAAATTTCACTTTCTCACTTCT  800

seq1  GATTTGAGCTACCTCAGATGAATAACAAATACACACTAAGCCTAGTGTCC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTGAGCTACCTCAGATGAATAACAAATACACACTAAGCCTAGTGTCC  850

seq1  TAGTTGC-TCTAATAGGTATGCACTAGCTTAAGAGCAGTATCAATTTCAT  896
      |||| || ||||||| |||||||||||||||||||||||||| |||||||
seq2  TAGTGGCTTCTAATA-GTATGCACTAGCTTAAGAGCAGTATC-ATTTCAT  898

seq1  AACTTTATTAATTTCATAGTAACTTTAAAAAAAAATATTTATTTATTTAT  946
      ||| ||||| ||||| |||||| |||||||||||||||||| |||||   
seq2  AAC-TTATT-ATTTCCTAGTAA-TTTAAAAAAAAATATTTA-TTATT--A  942

seq1  TTATTTATTTATTTATTTATTATATGTAAGTACACTGTAGCTGTCTTCAG  996
      ||||||||||| |||||   ||||||||||||||||||||||||||||||
seq2  TTATTTATTTA-TTATT--ATATATGTAAGTACACTGTAGCTGTCTTCAG  989

seq1  AATGCCACTCCAGAAGAGGGCATTAGACCTTGTTATGGATGGTTGTGAGC  1046
       ||| |||||||| ||||||||||||| |||||| ||||||| |||||||
seq2  -ATG-CACTCCAG-AGAGGGCATTAGA-CTTGTT-TGGATGG-TGTGAGC  1033