BAC Information

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BAC

Clone NameB6Ng01-035F06
Chromosome16 (Build37)
Map Location 81,166,844 - 81,167,858
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621365, LOC100039724
Downstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-035F06.bB6Ng01-035F06.g
ACCDH863823DH863824
length9751,068
definitionDH863823|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F06, 5' end.DH863824|Mus musculus domesticus DNA, BAC clone: B6Ng01-035F06, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgagtgaatgctcttaagtaatatagagatattattttactcc
atcacagaagaaatttgtgcatttaaaaactaagtcactcattataacac
actgcacattcaatcatattgtcaatagtatctttttgtaaggctgtgtg
atactatatatacaatatttttaacagtctcggggaaatgaatctagggt
ctcccacatgataagccatcagcttactaccgagctttatctataggcct
acatctcattttttcatactcatttagtgatgatgacacatttattgatt
ctatgtgactactatataatgcagtaaattatactctaaatctctcttca
acaacataatttcaatagctttagattataaacaaatatgagattgtgaa
gtaatatagaaatcttttttataaatttttttataaaaagaaatcttttt
ttataatatagagaatgtgccatagtgcttttataattgatgggacattc
tatatttctacaaagtaatataaactgtgtctcatttctttatatcatat
tccaaaatttaatattgcattagttacctaaattcacttatatgaaataa
gattaaaaaaaaaaaaaaaagaaaagccatgctcataggagagcaacaat
aagcacaactgctagggtctagtcagaggccaattgtagtaacacttaaa
gtaacaaagtctcacttgtgcaaatgaataacaaagcagccatgtaacac
agcagctaaagttagacatgcactgatgcagtgtacgatttagatctcat
gggcatagcaacacatacagtacacacgcacgcgcgcgcgcgcgccacca
cctcacatccaccaccacacacactataccccccccggagaagaagagaa
ggagagaggaggaagaggagactctttacatagcatgctgagtactgcca
gtgctcagtaatgactatctggtta
gaattcacttttgtacctgcgtacaacgcttctttactagttaggcacag
cggaggcccgcgccatcttataatggggattgcttgcggcacacacggct
ctcctcagagattactggcggcacacatgcgattgcttgcagcacgtacc
ggctctccacatctcccccttttttattttattaaaatttgaggctggtc
taggcctgtgtaattatgcccatccgctgtggctcctgtcttaggtcgtt
cctccaatgtcacagcctttcctgtcatagggtaaccctatcgccaccgg
gccccgtgtcttaggttgatctgtgcatgaggaaagttgcccgtccctgg
ataccgcagtgctatgtgacattaactactaaatgacctagggcgaactc
tataaaagaggccagccaccaatgtcaattaattttttagcatagatagc
cagatttcaggggaggccccttgctcgatggcagcaagtgcttgagttat
cacaaccttgtcacgtgtttgttgggttctgagcttgcaaaccaaccaga
gcatgaccacaagtccacagcaggtggcaacgccaataaaccccaaccca
ttccttaaaataagaaaagggcagatgaaatccaggaggagaggccctct
gtcaatgacaggtccactcgtgtcgagttgatctttagaacggtcactct
cagggtctcaagggtctcatcgaattctttcagaccagtttcctgcagaa
tataaagaaagcttgtctaggcagattagctgcatagtaaaatttcatat
tggacactggtatgcacagagcttccagtttctttcacacccactgggcc
atcttggtatagaccctatctgttcctcacagtcaagcgctgattcaaat
catcagcctccttactgtctagccgaggttggacagtgatgcacagcgat
ctgctgagctgattaatttgtgctgatgaacgcataacacgatctgcact
gaacacgctgcatgctgaatgctataccggacagatgctatctctttgtc
gacaataagggaggttcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81166844_81167858
seq2: B6Ng01-035F06.b_45_1019 (reverse)

seq1  TAACCAAGATAGTACATATACTGAGCACTTGTGCAAGTTACCTCAGCATG  50
      ||||| ||||||| ||| ||||||||||   ||  |||   |||||||||
seq2  TAACC-AGATAGT-CAT-TACTGAGCAC---TGGCAGT--ACTCAGCATG  42

seq1  CTATTGTATAAGATGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTC  100
      ||| |||| ||||  |||           ||||  ||| |||||||  ||
seq2  CTA-TGTA-AAGAGTCTC-----------CTCTTCCTC-CTCTCTCCTTC  78

seq1  TCTCTCTCTCTCGTGTGTGTGTGTATGTGTGTGTGTGTGTGTGTGTGTGT  150
      ||| ||| ||||  | | | || ||     ||||||||| ||| |||  |
seq2  TCT-TCT-TCTCCGGGGGGGGTATA-----GTGTGTGTG-GTG-GTGGAT  119

seq1  GTGTGTGTGTGTGTGCGCGCGCGCGCGCGTGCGTGTGTGCTTGGTATGTG  200
      ||| | ||| ||| |||||||||||||||||||||||| ||  |||||||
seq2  GTGAG-GTG-GTG-GCGCGCGCGCGCGCGTGCGTGTGTACT--GTATGTG  164

seq1  TTTGCTATGCCCATGAGATCTTAAATCCTTACACTTGCATCAGTGCATGT  250
       ||||||||||||||||||| ||||| | ||||| |||||||||||||||
seq2  -TTGCTATGCCCATGAGATC-TAAAT-CGTACAC-TGCATCAGTGCATGT  210

seq1  CTAACTTTAGCTGCTGTGTTACATGGCTGCTTTGTTATTCATTTTGCACA  300
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  CTAACTTTAGCTGCTGTGTTACATGGCTGCTTTGTTATTCA-TTTGCACA  259

seq1  AGTGAGACTTTGTTACTTTAAGTGTTACTACAATTGGCCTCTGACTAGAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGAGACTTTGTTACTTTAAGTGTTACTACAATTGGCCTCTGACTAGAC  309

seq1  CCTAGCAGTTGTGCTTATTGTTGCTCTCCTATGAGCATGGCTTTTC-TTT  399
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCTAGCAGTTGTGCTTATTGTTGCTCTCCTATGAGCATGGCTTTTCTTTT  359

seq1  TTTTTTTTTTTTAATCTTATTTCATATAAGTGAATTTAGGTAACTAATGC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTAATCTTATTTCATATAAGTGAATTTAGGTAACTAATGC  409

seq1  AATATTAAATTTTGGAATATGATATAAAGAAATGAGACACAGTTTATATT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATTAAATTTTGGAATATGATATAAAGAAATGAGACACAGTTTATATT  459

seq1  ACTTTGTAGAAATATAGAATGTCCCATCAATTATAAAAGCACTATGGCAC  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTTGTAGAAATATAGAATGTCCCATCAATTATAAAAGCACTATGGCAC  509

seq1  ATTCTCTATATTATAAAAAAAGATTTCTTTTTATAAAAAAATTTATAAAA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTATATTATAAAAAAAGATTTCTTTTTATAAAAAAATTTATAAAA  559

seq1  AAGATTTCTATATTACTTCACAATCTCATATTTGTTTATAATCTAAAGCT  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGATTTCTATATTACTTCACAATCTCATATTTGTTTATAATCTAAAGCT  609

seq1  ATTGAAATTATGTTGTTGAAGAGAGATTTAGAGTATAATTTACTGCATTA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGAAATTATGTTGTTGAAGAGAGATTTAGAGTATAATTTACTGCATTA  659

seq1  TATAGTAGTCACATAGAATCAATAAATGTGTCATCATCACTAAATGAGTA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATAGTAGTCACATAGAATCAATAAATGTGTCATCATCACTAAATGAGTA  709

seq1  TGAAAAAATGAGATGTAGGCCTATAGATAAAGCTCGGTAGTAAGCTGATG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAAAAATGAGATGTAGGCCTATAGATAAAGCTCGGTAGTAAGCTGATG  759

seq1  GCTTATCATGTGGGAGACCCTAGATTCATTTCCCCGAGACTGTTAAAAAT  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTATCATGTGGGAGACCCTAGATTCATTTCCCCGAGACTGTTAAAAAT  809

seq1  ATTGTATATATAGTATCACACAGCCTTACAAAAAGATACTATTGACAATA  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGTATATATAGTATCACACAGCCTTACAAAAAGATACTATTGACAATA  859

seq1  TGATTGAATGTGCAGTGTGTTATAATGAGTGACTTAGTTTTTAAATGCAC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTGAATGTGCAGTGTGTTATAATGAGTGACTTAGTTTTTAAATGCAC  909

seq1  AAATTTCTTCTGTGATGGAGTAAAATAATATCTCTATATTACTTAAGAGC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTTCTTCTGTGATGGAGTAAAATAATATCTCTATATTACTTAAGAGC  959

seq1  ATTCACTCAAGAATTC  1015
      ||||||||||||||||
seq2  ATTCACTCAAGAATTC  975