BAC Information

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BAC

Clone NameB6Ng01-036J13
Chromosome16 (Build37)
Map Location 7,017,039 - 7,094,988
singlet/doubletdoublet
Overlap geneA2bp1
Upstream geneLOC100042445
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-036J13.bB6Ng01-036J13.g
ACCDH864720DH864721
length1,128450
definitionDH864720|Mus musculus domesticus DNA, BAC clone: B6Ng01-036J13, 5' end.DH864721|Mus musculus domesticus DNA, BAC clone: B6Ng01-036J13, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(7,093,814 - 7,094,988)(7,017,039 - 7,017,492)
sequence
gaattcaatccttggtccaccatttggtgctgtgatcttgacacccagcc
cactgcctgaacatgaatggatatgcaataccttcttaatgaataatgat
tagatgatcatatcagccccactactggtcacaccacatcaatcaatgtg
gcagaggcccaaggctaagacctacaaccttaccagaagaaaattcttag
atttgcctcctatctttggaataaacaaattacaagggccttatctcagg
acgtaaacatcccctcccacacaaagggactctccgttctggccttgacc
tcattttgcctcaggcagaatgcttttggctgtcagctgtgagaagctcg
agtagagcaggtggaaggaggtgtaaatgaccctgaaggttaaaagggaa
agaaatgatcgcccaaggggttgtgaaacagtttaaagattcactgtgtt
cattttggacatggatgtaaggaaactggcttctcagaccctctgtgatg
aagaaataactggcaaagccatctgccaaagtgaagtttgatggcgtctg
tcagaatagtgactgtataaccctttagaactaagcattctgcctctgga
attctactgcgactgaatcgtagacacacacacacaattctctctctctc
tctctttctctctctctctctctctctctctcacacacacacacacacac
acacacacacactcacaattgtacaatcttatgtaattgtagaatggtaa
tagaaaataaatgaaggttgactaaatacttataaaaggccaaacaatat
ggctcaggagttaagagcacttggcctgtcttgtggggatcatgctctga
ctctcactagccctaggaatgtaagtcctgtaagatgggatcattggctc
actggtgcagtgctgtgttcttgaagccctgaattagcaggcattccaca
aatgcgatggttgtcagctattgctcagccaggaagagacattactcaac
taacatagctaagagtgacttgcgacagctgtgattcaccgcatcggaat
gtacagtgccactgcatgaatgacattaagatcacgacttagaattctgt
cgacgctggaatgccaatatggacttgg

atttctatgtgtgtgcaccaggctttctattatttgttcattcagcaagc
attgacggaattttctgcagagtgaggcctgagccacacatggcagtgac
cagcatgtcaccctcatcctctagagcaaaggacaggatgataagaacat
atagtgagggcagtattagaaatttaaggggactggggggtggaatttgg
agagggagggtctgcatgaaaatgacctgactggatggtgactgctttta
gatcattttctgggctccatccacaaatgatgatgcatgataccaactca
tctgactgtcgcctcactagaacctgtgtcccctagaggaagctcggaat
tcatctttctctcatatagcatcctacaaggaacgggaactttcgggaaa
tgaccaaacattctagccctattttcagagtcagcccccagtgactcata
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_7093814_7094988
seq2: B6Ng01-036J13.b_47_1174 (reverse)

seq1  CCAAGTCCATATGTGGGCACTCCCCTAGCATGCTGGACAGATATCCTAAG  50
      |||||||||||  | |||| |||   |||    | |||||| || |||||
seq2  CCAAGTCCATA--TTGGCATTCC---AGC---GTCGACAGA-ATTCTAAG  41

seq1  ATTCTGTAGATCTATTTAGTGTGTCTATCCATGTCAGTGTGTGCACTTGT  100
        || || ||||   ||| |||    || |||| |||||   ||||   |
seq2  --TC-GT-GATC---TTAATGT---CATTCATG-CAGTG---GCAC---T  74

seq1  GTACATACCCAGATGCCGGGTGAGATCACAGCTGTCCGCCATGTCACTCT  150
      |||||| ||  |||||  ||||| ||||||||||||   || ||||||||
seq2  GTACATTCC--GATGC--GGTGA-ATCACAGCTGTC--GCAAGTCACTCT  117

seq1  CTAGCTATTGTTATGTTTGAGGTGATGTCTCTTCCTGGGCCTGAGCATAT  200
       |||||| |||||   |||| || ||||||||||||||  |||||||   
seq2  -TAGCTA-TGTTA--GTTGA-GTAATGTCTCTTCCTGG--CTGAGCAATA  160

seq1  GCTGACAACCAATCGGCATTTGTGGGAATGCCTGGCTAATTACAGGGCTT  250
      |||||||||| ||| |||||||| ||||||||| ||||||| ||||||||
seq2  GCTGACAACC-ATC-GCATTTGT-GGAATGCCT-GCTAATT-CAGGGCTT  205

seq1  CAAGAACACAGCACTGCA-CAGTGAGCCAATGATTCCATTCTTACAGGAC  299
      |||||||||||||||||| ||||||||||||||| ||| |||||||||||
seq2  CAAGAACACAGCACTGCACCAGTGAGCCAATGATCCCA-TCTTACAGGAC  254

seq1  TTACATTCCTAGGGCTAGTGAGAGTCAGAGCATGATCCCCCACAAGGACA  349
      |||||||||||||||||||||||||||||||||||| |||||||| ||||
seq2  TTACATTCCTAGGGCTAGTGAGAGTCAGAGCATGAT-CCCCACAA-GACA  302

seq1  GGCCAAGTGCTCTTAACTCCTGAGCCATATTGTTTGGCCTTTTATAAGTA  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCAAGTGCTCTTAACTCCTGAGCCATATTGTTTGGCCTTTTATAAGTA  352

seq1  TTTAGTCAACCTTCATTTATTTTCTATTACCATTCTACAATTACATAAGA  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAGTCAACCTTCATTTATTTTCTATTACCATTCTACAATTACATAAGA  402

seq1  TTGTACAATTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTACAATTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTGAGAGA  452

seq1  GAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAATTGTGTGTGTG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAGAGAGAGAGAGAGAGAAAGAGAGAGAGAGAGAGAATTGTGTGTGTG  502

seq1  TGTCTACGATTCAGTCGCAGTAGAATTCCAGAGGCAGAATGCTTAGTTCT  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTACGATTCAGTCGCAGTAGAATTCCAGAGGCAGAATGCTTAGTTCT  552

seq1  AAAGGGTTATACAGTCACTATTCTGACAGACGCCATCAAACTTCACTTTG  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGGTTATACAGTCACTATTCTGACAGACGCCATCAAACTTCACTTTG  602

seq1  GCAGATGGCTTTGCCAGTTATTTCTTCATCACAGAGGGTCTGAGAAGCCA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGATGGCTTTGCCAGTTATTTCTTCATCACAGAGGGTCTGAGAAGCCA  652

seq1  GTTTCCTTACATCCATGTCCAAAATGAACACAGTGAATCTTTAAACTGTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTCCTTACATCCATGTCCAAAATGAACACAGTGAATCTTTAAACTGTT  702

seq1  TCACAACCCCTTGGGCGATCATTTCTTTCCCTTTTAACCTTCAGGGTCAT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACAACCCCTTGGGCGATCATTTCTTTCCCTTTTAACCTTCAGGGTCAT  752

seq1  TTACACCTCCTTCCACCTGCTCTACTCGAGCTTCTCACAGCTGACAGCCA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACACCTCCTTCCACCTGCTCTACTCGAGCTTCTCACAGCTGACAGCCA  802

seq1  AAAGCATTCTGCCTGAGGCAAAATGAGGTCAAGGCCAGAACGGAGAGTCC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGCATTCTGCCTGAGGCAAAATGAGGTCAAGGCCAGAACGGAGAGTCC  852

seq1  CTTTGTGTGGGAGGGGATGTTTACGTCCTGAGATAAGGCCCTTGTAATTT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTGTGGGAGGGGATGTTTACGTCCTGAGATAAGGCCCTTGTAATTT  902

seq1  GTTTATTCCAAAGATAGGAGGCAAATCTAAGAATTTTCTTCTGGTAAGGT  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTCCAAAGATAGGAGGCAAATCTAAGAATTTTCTTCTGGTAAGGT  952

seq1  TGTAGGTCTTAGCCTTGGGCCTCTGCCACATTGATTGATGTGGTGTGACC  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGTCTTAGCCTTGGGCCTCTGCCACATTGATTGATGTGGTGTGACC  1002

seq1  AGTAGTGGGGCTGATATGATCATCTAATCATTATTCATTAAGAAGGTATT  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAGTGGGGCTGATATGATCATCTAATCATTATTCATTAAGAAGGTATT  1052

seq1  GCATATCCATTCATGTTCAGGCAGTGGGCTGGGTGTCAAGATCACAGCAC  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATATCCATTCATGTTCAGGCAGTGGGCTGGGTGTCAAGATCACAGCAC  1102

seq1  CAAATGGTGGACCAAGGATTGAATTC  1175
      ||||||||||||||||||||||||||
seq2  CAAATGGTGGACCAAGGATTGAATTC  1128


seq1: chr16_7017039_7017492
seq2: B6Ng01-036J13.g_66_521

seq1  GAATTCATTTCTATGTGTGTGCACCAGGCTTTCTATTATTTGTTCATTCA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTCTATGTGTGTGCACCAGGCTTTCTATTATTTGTTCATTCA  50

seq1  GCAAGCATTGACGGAATTTTCTGCAGAGTGAGGCCTGAGCCACACATGGC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGCATTGACGGAATTTTCTGCAGAGTGAGGCCTGAGCCACACATGGC  100

seq1  AGTGACCAGCATGTCACCCTCATCCTCTAGAGCAAAGGACAGGATGATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCAGCATGTCACCCTCATCCTCTAGAGCAAAGGACAGGATGATAA  150

seq1  GAACATATAGTGAGGGCAGTATTAGAAATTTAAGGGGACTGGGGGGTGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACATATAGTGAGGGCAGTATTAGAAATTTAAGGGGACTGGGGGGTGGA  200

seq1  ATTTGGAGAGGGAGGGTCTGCATGAAAATGACCTGACTGGATGGTGACTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGAGAGGGAGGGTCTGCATGAAAATGACCTGACTGGATGGTGACTG  250

seq1  CTTTTAGATCATTTTCTGGGCTCCATCCACAAATGATGATGCATGATACC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTTAGATCATTTTCTGGGCTCCATCCACAAATGATGATGCATGATACC  300

seq1  AACTCATCTGACTGTCGCCTCACTAGAACCTGTGTCCCCTAGAGGAAGCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTCATCTGACTGTCGCCTCACTAGAACCTGTGTCCCCTAGAGGAAGCT  350

seq1  CGGAATTCATCTTTCTCTCATATAGCATCCTACAAGGAACGGGAAC-TTC  399
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CGGAATTCATCTTTCTCTCATATAGCATCCTACAAGGAACGGGAACTTTC  400

seq1  GGGAAATGACCAAACATTCTAGCCCTA-TTTCAGAGTCAGCCCCCAGTGA  448
      ||||||||||||||||||||||||||| ||||||||||||||||||||||
seq2  GGGAAATGACCAAACATTCTAGCCCTATTTTCAGAGTCAGCCCCCAGTGA  450

seq1  CTCATA  454
      ||||||
seq2  CTCATA  456


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