BAC Information

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BAC

Clone NameB6Ng01-038A19
Chromosome16 (Build37)
Map Location 64,317,786 - 64,318,437
singlet/doubletsinglet
Overlap genenone
Upstream geneEpha3, LOC100043540
Downstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, Htr1f, LOC668247, LOC672931
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-038A19.bB6Ng01-038A19.g
ACCDH865734DH865735
length1,242650
definitionDH865734|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A19, 5' end.DH865735|Mus musculus domesticus DNA, BAC clone: B6Ng01-038A19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccccacccctaagccccttaccccataagaacccctacctttcta
gccttgtggccgacatccattatttcctgtgtgagatgcatgtctgtccg
aagctccatcattaaactgcctcatgtgcttacagcaagaaggattctca
tgtttctttggtgtgctctctcttccaagactagagtgggggtccccaaa
atgggatcttacagtatcactcttggaaagaaaagagaaagttgggttgg
gttattgaatctgcatgtctgtccctagtgatacatctctgaagctaaag
aagtcacttatcaggctcttgtcagcaagcacttcttggcacccaaaata
gtatttggtgactttctatgagatggatccccaggtggggcagtaactgg
atggcctttccttcggtctctgctccacacatagctgtctcctgagaggc
tctgccagagactgacaagtacagaggcagatgctcacaaccaaccatta
tactgatcaagtggtcccaaatggaggagttaaaggactaaaggagctga
gggggcttgtagccccaagggaaaaacagtatcaaccaaccagatccctc
atagctcccaaggactaaaccaccaaccaaggagtacacatggaggaacc
catggcttcagccatatatgtaacagagagtggccttgttgggcactaat
gggagaagaggcccttggtcactgtctcagtcagggtttctattcctgca
caaacatcatgaccaagaagcaaattggggaggaaagggtttattcagct
tacatttccacattgctgttgatcctacaggaagtcaggactggaactca
agcaggtcaggaagcaggagctgatgcataggccatggagcaacgttact
tactggcttgcttcccctggcttgctcagcttgctttcttatagaaccca
ggactaccagcccagagatggtaccacccacaggggcccttcctcttaat
cactaattaagaaaatgccttacagctggatctcatggaggcattttctc
ccttgagctcctttctctgtgaaaactcagctggtgtcagttgtcccaaa
cagccagtacattgaccttgtcactgacaccaaaacatcacttaggccca
ccttacttcaattcatctcagacctaaaccttaaggtccagctcaattca
gccttgaaatctaacttattaagtcccttcaccaaagatgtt
gaattcaacctaacttctttggaggggaggagggttgtaagagagaagta
gatggttgatagttattggaagagtgctacacaccaggactcatagagta
agtgatggtaagatgtgatctatttagtaaataattcctgaataccaagc
aattttgctctttttgaatggatgtttgcctctaaactgcaaagctaaaa
atgtaaaaagaaaaaaaggtgctgcttctacatataaaataatatttccc
gggagctaatagatttctcttcattgctacctaacaatagaaaaatgaaa
aaggactttaatttcagctattatactagactctaaatagaatactctat
ctatggaggactgtgaatattttgaattactttgatagaagcataatgga
attatataaatccttccacataaacatttaatgtgaagtaaattaaccaa
tagtattttcttgtgaagtatgttatacaaatgaaatctaattctctgta
tttgttctatcttttccaaatattttattaaatatttacaaattttatgt
tggtggaggagtcatttgattaggtttaagattttgaatctctttaataa
ggtggccctaaataaatactcatttcaaacttatgtatttgtgagtttaa

quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_64317786_64318437
seq2: B6Ng01-038A19.g_67_716

seq1  GAATTCAACCTAACTTCTTTGGAGGGGAGGAGGGTTGTAAGAGAGAAGTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAACCTAACTTCTTTGGAGGGGAGGAGGGTTGTAAGAGAGAAGTA  50

seq1  GATGGTTGATAGTTATTGGAAGAGTGCTACACACCAGGACTCATAGAGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGGTTGATAGTTATTGGAAGAGTGCTACACACCAGGACTCATAGAGTA  100

seq1  AGTGATGGTAAGATGTGATCTATTTAGTAAATAATTCCTGAATACCAAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATGGTAAGATGTGATCTATTTAGTAAATAATTCCTGAATACCAAGC  150

seq1  AATTTTGCTCTTTTTGAATGGATGTTTGCCTCAGAAACTGCAAAGCTAAA  200
      ||||||||||||||||||||||||||||||||  ||||||||||||||||
seq2  AATTTTGCTCTTTTTGAATGGATGTTTGCCTC-TAAACTGCAAAGCTAAA  199

seq1  AATGTAAAAAGAAAAAAAGGTGCTGCTTCTACATATAAAATAATATTTCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGTAAAAAGAAAAAAAGGTGCTGCTTCTACATATAAAATAATATTTCC  249

seq1  CGGGAGCTAATAGATTTCTCTTCATTGCTACCTAACAATAGAAAAATGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGAGCTAATAGATTTCTCTTCATTGCTACCTAACAATAGAAAAATGAA  299

seq1  AAAGGACTTTAATTTCAGCTATTATACTAGACTCTAAATAGAATACTCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGACTTTAATTTCAGCTATTATACTAGACTCTAAATAGAATACTCTA  349

seq1  TCTATGGAGGACTGTGAATATTTTGAATTACTTTGATAGAAGCATAATGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTATGGAGGACTGTGAATATTTTGAATTACTTTGATAGAAGCATAATGG  399

seq1  AATTATATAAATCCTTCCACATAAACATTTAATGTGAAGTAAATTAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTATATAAATCCTTCCACATAAACATTTAATGTGAAGTAAATTAACCA  449

seq1  ATAGTATTTTCTTGTGAAGTATGTTATACAAATGAAATCTAATTCTCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGTATTTTCTTGTGAAGTATGTTATACAAATGAAATCTAATTCTCTGT  499

seq1  ATTTGTTCTATCTTTTCCAAATATTTTATTAAATATTTACAAATTTTATG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGTTCTATCTTTTCCAAATATTTTATTAAATATTTACAAATTTTATG  549

seq1  TTGGTGGAGGAGTCAATATGATTAGGTTTAAGATTTTGAATCTCTTTAAT  600
      |||||||||||||| || ||||||||||||||||||||||||||||||||
seq2  TTGGTGGAGGAGTC-ATTTGATTAGGTTTAAGATTTTGAATCTCTTTAAT  598

seq1  AAGGTGGCCCTAAATAAATACTCATTCCAAACTTATGTATTTGTGAGTTA  650
      |||||||||||||||||||||||||| |||||||||||||||||||||| 
seq2  AAGGTGGCCCTAAATAAATACTCATTTCAAACTTATGTATTTGTGAGTTT  648

seq1  AA  652
      ||
seq2  AA  650