BAC Information

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BAC

Clone NameB6Ng01-041G19
Chromosome16 (Build37)
Map Location 80,728,850 - 80,729,916
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik, LOC621365
Downstream geneLOC100039724, Ncam2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-041G19.bB6Ng01-041G19.g
ACCDH868093DH868094
length1,1721,059
definitionDH868093|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G19, 5' end.DH868094|Mus musculus domesticus DNA, BAC clone: B6Ng01-041G19, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaataccgaatggcagagaagcacctgaaaaaatg
ttcaacatccttaatcatcagggaaatacaaatcaaaacaaccctgagat
tctacctcacaccagtcagaatggctaagataaaaaattcaggtgatagc
agatgctggctaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcagacttgtacaaccactctggaaatcattctggcggttcctca
gaaaattggacatagtactaccggagaatccagcaatacctctcctgggc
atatatccattagatgtcccaacctgtaagaaggacacatgctccactat
gttcatagcagtcttatttataatagccagaagctggaaagaacccagat
gcccctcaacagaggaatggatacagaaaatgtggtacatttacacaatg
gaatactactcagctattaaaaaatgaatttatgaaattcctaggcaaat
ggatggacctggagggtatcatcctgagtgaagtaacccaatcacaaagg
aactcgcacaatatgtactcactgataagtggatattagcccagaaactt
aggatacccaagatataagatacaacttgccaaacgaatgaaattccaga
ataactaagaccaaagtgtggacactctaccctttcttagaaatgggaac
aaagcacccatagaaggagttacagagacaaaatttggagctgtgacgaa
aggatggaccatctagtgattgccatatgcagggatccatcccataatca
gcttccaaacgctgacaccattgcatacactagcaagattttgctgaaag
gacccagatatagctctctcttgtgagactatgccggggcctagcaaaca
cagaagtggatgatctcagtcagctattggatgggtcacacggcccctta
tggaggagctagagaattacccaagagctaaagggaactgcaaccctaat
agtggaacaacatatgaactaaccagtacccggagcttcttgtctttagc
ttcatatgtatcaaaagatgcctatcggcatttctgccaagagagcccat
tggaacttgctaactttaatgcccagtcacgggaacacccaggctaaaaa
ggacatggtgtgtgtggattgg
gaattcagttaataggtagtgtatgtactatgcttagtattgcagtactc
tcaatagttagatatataggccacctagatacctgttaacagatgaacag
ataaagaatatgtgatccatatgtacaataatttcatgcagtgaacatta
ttttcttaagtaaaggaagataaatttcagtccaagaaatatatcatttg
ttcagacagctttacagtgtttggaaaagtttgaatatttcacatcaatg
tgcaaaatttaaattatgttttaaaaagctgaaagtgttggcagcaataa
accctatttttaacctgtcaacactggcttcagcatagtttagttggcga
tgcctacacattccctagttacacagtgaaataaacacatattatatggc
ttagataaaagctcaaaaagataaaaagatgaatttattcttttactgtc
cttattaaaatttaaggctagatatattacccaggtttgtccttgaaaaa
aaaataaaaccgaaaatttttaactttaaaataaaacaaaacaatcacac
acacacacacacacacacacacacacacacacacacaaaatagaacaaaa
caaacacaagagtaatttaagtataggataaaggcatattctatagaatg
gatagatgatagttaagggctcttacataaatttttctgcagcatactaa
cttctggacagacagagtttttgaactttgcattttatagtatgtaaatc
ttgtttgcttatttgctttgtcaaaacagggtttctctcagtagccctat
gtatcctgggcctgacattatataccagactaaccactatctcaagagag
gttcctgtcctctgcctcccaagttctgggattaaaggtgccctccacaa
tgtttttctggcaataactgtaataaacaaatgatacttcatgtactaca
tttcaagaattgataactaatggtactagtgaatgccatattgtggattt
atgtttcagacatttactataataaatatgtccaatggacaaaaaaaaat
gtagtctga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80728850_80729916
seq2: B6Ng01-041G19.g_68_1126

seq1  GAATTCAGTTAAAAGGTAGTGTATGTACTATGCTTAGTATTGCAGTACTC  50
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  GAATTCAGTTAATAGGTAGTGTATGTACTATGCTTAGTATTGCAGTACTC  50

seq1  TCAATAGTTAGATATATAGGCCACCTAGATACCTGTTAACAGATGAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGTTAGATATATAGGCCACCTAGATACCTGTTAACAGATGAACAG  100

seq1  ATAAAGAATATGTGATCCATATGTACAATAATTTCATGCAGTGAACATTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAAGAATATGTGATCCATATGTACAATAATTTCATGCAGTGAACATTA  150

seq1  TTTTCTTAAGTAAAGGAAGATAAATTTCAGTCCAAGAAATATATCATTTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTTAAGTAAAGGAAGATAAATTTCAGTCCAAGAAATATATCATTTG  200

seq1  TTCAGACAGCTTTACAGTGTTTGGAAAAGTTTGAATATTTCACATCAATG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAGACAGCTTTACAGTGTTTGGAAAAGTTTGAATATTTCACATCAATG  250

seq1  TGCAAAATTTAAATTATGTTTTAAAAAGCTGAAAGTGTTGGCAGCAATAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAAATTTAAATTATGTTTTAAAAAGCTGAAAGTGTTGGCAGCAATAA  300

seq1  ACCCTATTTTTAACCTGTCAACACTGGCTTCAGCATAGTTTAGTTGGCGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCCTATTTTTAACCTGTCAACACTGGCTTCAGCATAGTTTAGTTGGCGA  350

seq1  TGCCTACACATTCCCTAGTTACACAGTGAAATAAACACATATTATATGGC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTACACATTCCCTAGTTACACAGTGAAATAAACACATATTATATGGC  400

seq1  TTAGATAAAAGCTCAAAAAGATAAAAAGATGAATTTATTCTTTTACTGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGATAAAAGCTCAAAAAGATAAAAAGATGAATTTATTCTTTTACTGTC  450

seq1  CTTATTAAAATTTAAGGCTAGATATATTACCCAGGTTTGTCCTTGAAAAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTAAAATTTAAGGCTAGATATATTACCCAGGTTTGTCCTTGAAAAA  500

seq1  AAAATAAAACCGAAAATTTTTAACTTTAAAATAAAACAAAACAATCACAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAAACCGAAAATTTTTAACTTTAAAATAAAACAAAACAATCACAC  550

seq1  ACACACACACACACACACACACACACACACACACACAAAATAGAACAAAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACACACACACACACACACACACACACACACACACAAAATAGAACAAAA  600

seq1  CAAACACAAGAGTAATTTAAGTATAGGATAAAGGCATATTCTATAGAATG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACACAAGAGTAATTTAAGTATAGGATAAAGGCATATTCTATAGAATG  650

seq1  GATAGATGATAGTTAAGGGCTCTTACATAAATTTTTCTGCAGCATACTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATAGATGATAGTTAAGGGCTCTTACATAAATTTTTCTGCAGCATACTAA  700

seq1  CTTCTGGACAGACAGAG-TTTTGAACTTTGCA-TTTATAGTATGTAAATC  748
      ||||||||||||||||| |||||||||||||| |||||||||||||||||
seq2  CTTCTGGACAGACAGAGTTTTTGAACTTTGCATTTTATAGTATGTAAATC  750

seq1  TTGTTTGCTTATTTGCTTTGTCAAAACAGGGTTTCTCTCAGTAGCCCTAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCTTATTTGCTTTGTCAAAACAGGGTTTCTCTCAGTAGCCCTAT  800

seq1  GTATCCTGGGCCTGACATTATATACCAGACTAACCACTATCTCAAGAGAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATCCTGGGCCTGACATTATATACCAGACTAACCACTATCTCAAGAGAG  850

seq1  GTTCCTG-CCTCTGCCTCCCAAGTTCTGGGATTAAAGGTGCCCTCCACCA  897
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  GTTCCTGTCCTCTGCCTCCCAAGTTCTGGGATTAAAGGTGCCCTCCA-CA  899

seq1  TTGTTTTTCTGGCAAATAAACTGTAATAAAACAAAATGAATACTTCATGT  947
       ||||||||||||||   ||||||||||||   ||||| |||||||||||
seq2  ATGTTTTTCTGGCAA--TAACTGTAATAAA--CAAATG-ATACTTCATGT  944

seq1  ACTACATTTCAAGAATTTGATAACTAAATGGTACTAGTGAATGCCATATT  997
      ||||||||||||||| ||||||||| ||||||||||||||||||||||||
seq2  ACTACATTTCAAGAA-TTGATAACT-AATGGTACTAGTGAATGCCATATT  992

seq1  GTGGAATTTATGTATCAGACATTTTACATAAATAAATATGTTCAATGAAC  1047
      |||| |||||||| ||||||| |||||   ||||||||||| ||||| ||
seq2  GTGG-ATTTATGTTTCAGACA-TTTACTATAATAAATATGTCCAATGGAC  1040

seq1  AAAAAAAAATGTTAGTCTGA  1067
      ||||||||||| ||||||||
seq2  AAAAAAAAATG-TAGTCTGA  1059