BAC Information

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BAC

Clone NameB6Ng01-043I23
Chromosome16 (Build37)
Map Location 27,934,856 - 27,936,074
singlet/doubletsinglet
Overlap genenone
Upstream geneGm606, Ostn, Uts2d, Ccdc50
Downstream geneFgf12, 1600021P15Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-043I23.bB6Ng01-043I23.g
ACCDH869585DH869586
length1,2091,174
definitionDH869585|Mus musculus domesticus DNA, BAC clone: B6Ng01-043I23, 5' end.DH869586|Mus musculus domesticus DNA, BAC clone: B6Ng01-043I23, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcttactgggtgagaaagggggtttaaaggatttggttaatgtc
tccctcacagtaaagagcagtaactctttcttttcatttaactcgagaac
atttcttctagatggttacagtaatccttgaaatgctgacatttcaatga
cttaagttaaaatattgtttctaattaatggattttaaaatatagtaaca
cagatagtataaacaacatatttcttgcaaactaacagttttaatttctc
ataaactattaacaagttttaatttggggcttttataagtgtataaatgc
cctttgtacaataatttacagaaataatttaacacaaaattacaaaaaaa
atgttgtcctctatccaaatgatttgcttgataaagcctacagccttttg
ttgtattattaattccagttactatatgtccagtgagcactactttgaga
aaaatgtccagctcctttatttgaaaaattatttaaaacaatactttaca
tttgggtttagtgcaacatcaatactattctggataagtaacataatatt
gtgtctgagctttggaggaaatatgaaagcagcagatatgacctcgtaga
ccttcagattcattgctttcacctgaaacttgtgctttcacatctaagga
ccctgtgtttttctcctcttggtatcagaactaagagatcagtgacccag
taacttttcttgtctttaaatcattttagcttcgtacctttttttactta
ccttttatttctcaaggcagattgaacaaatacaagtgtcaaataaatgt
caattaattatgtaaatttgtctggagttccaaagtcagatttaatataa
ttttggaactttccatatttagattatcccagacatgtagagcaatttgt
gaacctgttttctgttttgttcaaagcagacaggtcaactattacccctc
ttcattcaaaataaactaattcttggctggctaattattttgatgatatg
cataattctaagatcaagtagtctttttattgtcaaaattgtgacttttc
tactttctcttcagcttaatggaccatttttttttttcaagaatatgaac
tttataattattatgcaagtccagaataattgttacatggaaaactatta
gcctacactccatgcaggttcgaaatctcttctacgggtctccttaggtc
ttttctagt
gaattcttagagctggatttgcagatggctgtgagatgcccaacatggat
gctgggaactggaatcaagtccttttgaagtgcctcaagtgttcttaacc
accgaaccatcaaccatctctctagccatagtaagtttcaggttcaaaga
gtcactaattccaccacaatattaagactgtcagcagtccccaacctctt
tctcatttccctcttttcaagatgcactaactttgaagcaattcatttct
tcccaacagtttttctttaaacactaaaatttattttgacagtttcactt
ataatgagttttagtgctgcatgtctatcccctgttgtatttttgctcta
ctatgttcataattttatactgtctttattatgaatccttccacattgta
gtactatgattctgctgatttgtgagtggaacatataagaatgtgttgct
gaaggatagaaaacagtagaatgttgtaagctgacctcaatgggccattc
tggtagaatgttacaagactataattctgagagaaattcacttactgact
gctcatcttgtgaggtgttatagaggaatgagttatttatttatttattt
atttacatctcaaactctgcttccactcctagttcttccctcacagagtt
cctccccccatccccactctccttctcttctaagaggatggggccccatg
gataaccctctatcctggcacattaagtctctggcagattaggcaagtcc
tcttgttctaaggccagacagggcagccatgaaaactgtgttgcctgtct
gctacatgtgtgctgagagaccttgttccaatatgtgtaagttctttgat
tagtggttcagagtctgagaacgtccaggggtccaggtctgtaattctgc
tagtcttcttgtgcgatagtcatctacttcaggtccttcaatccttcccc
caactcttcataagtgtactgacctctgtctatgtgggctgtggatctct
gctgcaggtagagctactgtctgcatgaaaacaaggtatcattaataatg
tcaggactgctgctgcccataagagggttcaagttggcaggttatggtgg
cccttctttcaatctgctttccttatatttctttgacaaacatttggata
agatttgtgtgtgggtggttacgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_27934856_27936074
seq2: B6Ng01-043I23.b_45_1253

seq1  GAATTCTCTTACTGGGTGAGAAAGGGGGTTTAAAGGATTTGGTTAATGTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTTACTGGGTGAGAAAGGGGGTTTAAAGGATTTGGTTAATGTC  50

seq1  TCCCTCACAGTAAAGAGCAGTAACTCTTTCTTTTCATTTAACTCGAGAAC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCACAGTAAAGAGCAGTAACTCTTTCTTTTCATTTAACTCGAGAAC  100

seq1  ATTTCTTCTAGATGGTTACAGTAATCCTTGAAATGCTGACATTTCAATGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCTTCTAGATGGTTACAGTAATCCTTGAAATGCTGACATTTCAATGA  150

seq1  CTTAAGTTAAAATATTGTTTCTAATTAATGGATTTTAAAATATAGTAACA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGTTAAAATATTGTTTCTAATTAATGGATTTTAAAATATAGTAACA  200

seq1  CAGATAGTATAAACAACATATTTCTTGCAAACTAACAGTTTTAATTTCTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAGTATAAACAACATATTTCTTGCAAACTAACAGTTTTAATTTCTC  250

seq1  ATAAACTATTAACAAGTTTTAATTTGGGGCTTTTATAAGTGTATAAATGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTATTAACAAGTTTTAATTTGGGGCTTTTATAAGTGTATAAATGC  300

seq1  CCTTTGTACAATAATTTACAGAAATAATTTAACACAAAATTACAAAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTGTACAATAATTTACAGAAATAATTTAACACAAAATTACAAAAAAA  350

seq1  ATGTTGTCCTCTATCCAAATGATTTGCTTGATAAAGCCTACAGCCTTTTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTGTCCTCTATCCAAATGATTTGCTTGATAAAGCCTACAGCCTTTTG  400

seq1  TTGTATTATTAATTCCAGTTACTATATGTCCAGTGAGCACTACTTTGAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATTATTAATTCCAGTTACTATATGTCCAGTGAGCACTACTTTGAGA  450

seq1  AAAATGTCCAGCTCCTTTATTTGAAAAATTATTTAAAACAATACTTTACA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGTCCAGCTCCTTTATTTGAAAAATTATTTAAAACAATACTTTACA  500

seq1  TTTGGGTTTAGTGCAACATCAATACTATTCTGGATAAGTAACATAATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGGGTTTAGTGCAACATCAATACTATTCTGGATAAGTAACATAATATT  550

seq1  GTGTCTGAGCTTTGGAGGAAATATGAAAGCAGCAGATATGACCTCGTAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTCTGAGCTTTGGAGGAAATATGAAAGCAGCAGATATGACCTCGTAGA  600

seq1  CCTTCAGATTCATTGCTTTCACCTGAAACTTGTGCTTTCACATCTAAGGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTCAGATTCATTGCTTTCACCTGAAACTTGTGCTTTCACATCTAAGGA  650

seq1  CCCTGTGTTTTTCTCCTCTTGGTATCAGAACTAAGAGATCAGTGACCCAG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGTTTTTCTCCTCTTGGTATCAGAACTAAGAGATCAGTGACCCAG  700

seq1  TAACTTTTCTTGTCTTTAAATCATTTTAGCTTCGTACCTTTTTTTACTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTTTCTTGTCTTTAAATCATTTTAGCTTCGTACCTTTTTTTACTTA  750

seq1  CCTTTTATTTCTCAAGGCAGATTGAACAAATACAAGTGTCAAATAAATGT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTTTATTTCTCAAGGCAGATTGAACAAATACAAGTGTCAAATAAATGT  800

seq1  CAATTAATTATGTAAATTTGTCTGGAGTTCCAAAGTCAGATTTAATATAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAATTATGTAAATTTGTCTGGAGTTCCAAAGTCAGATTTAATATAA  850

seq1  TTTTGGAACTTTCCATATTTAGATTATCCCAGACATGTAGAGCAATTTGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGAACTTTCCATATTTAGATTATCCCAGACATGTAGAGCAATTTGT  900

seq1  GAACCTGTTTTCTGTTTTGTTCAAAGCAGACAGGTCAACTATTACCCCCT  950
      |||||||||||||||||||||||||||||||||||||||||||| |||||
seq2  GAACCTGTTTTCTGTTTTGTTCAAAGCAGACAGGTCAACTATTA-CCCCT  949

seq1  CTTCATTCAAAATAAACTAATTCTTGGCTGGCTAATTATTTTGATGATAT  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCATTCAAAATAAACTAATTCTTGGCTGGCTAATTATTTTGATGATAT  999

seq1  GCAT-ATTCTAAGATCAAGTAAGTCTTTTTATTGTCAACAATTGTGACTG  1049
      |||| ||||||||||||||| ||||||||||||||||| |||||||||| 
seq2  GCATAATTCTAAGATCAAGT-AGTCTTTTTATTGTCAA-AATTGTGACTT  1047

seq1  TTCTACTTTCTCTTCAGCTTAATGGTACCA-TTTTTTTCTTCAAGAGTAT  1098
      ||||||||||||||||||||||||| |||| ||||||| ||||||| |||
seq2  TTCTACTTTCTCTTCAGCTTAATGG-ACCATTTTTTTTTTTCAAGAATAT  1096

seq1  GAACCTTAATATTTAATTATGCAAGT-CAG-ATATTTGTTACCATTGAAA  1146
      |||| |||  |||  ||||||||||| ||| ||| |||||||   || ||
seq2  GAACTTTATAATT--ATTATGCAAGTCCAGAATAATTGTTAC--ATGGAA  1142

seq1  AACTATTTAGCTACA-TCCATGCAGGTTCCAGATAATCTCTTACTAACGG  1195
      |||||||   ||||| ||||||||||||| |   |||||||| || ||||
seq2  AACTATTAGCCTACACTCCATGCAGGTTCGA---AATCTCTT-CT-ACGG  1187

seq1  TGTCTCTCTAGGTTCTTTTCTAGT  1219
       |||||  |||| |||||||||||
seq2  -GTCTCCTTAGG-TCTTTTCTAGT  1209