BAC Information

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BAC

Clone NameB6Ng01-049B10
Chromosome16 (Build37)
Map Location 9,509,730 - 9,510,575
singlet/doubletsinglet
Overlap genenone
Upstream geneAbat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7, LOC665231, 1810013L24Rik, LOC100043106
Downstream geneGrin2a, LOC665291, LOC100042534, 4930517K11Rik, Atf7ip2, Emp2, Tekt5, Nubp1, BC068110, Ciita, LOC669998
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-049B10.bB6Ng01-049B10.g
ACCDH873452DH873453
length8441,218
definitionDH873452|Mus musculus domesticus DNA, BAC clone: B6Ng01-049B10, 5' end.DH873453|Mus musculus domesticus DNA, BAC clone: B6Ng01-049B10, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcacttaaaaataatttccttgatgtaccttaatgttttttggcag
ggagtctgttccatgcttgcttctactattgctgtttgacagggtgagaa
aaggagagtggagaacagtagtaggtcagtcatgagactcagtccttggg
gaattcacgggcatgtagacatagttcacatttcagttgctttcctatta
ctgtgataagacactgtgaccaagcaacttacagaagaaagagtattgag
gcttcatgtttcagggggtcagttaaagtccatgaccatcatggcgggga
gcatggtagcaggtaggcagccattgcactggagcagtacctgagagctt
acaatagtctttttttttttttttttttttttgaaccatgccagttgtat
gatggcaatctggtctccagactcctgggttgctctgaggactaagtctc
agaaatctgttcatccaatacccagaaagcatgtctgttagtccagtttt
tgtaactctagtgaaatatttgagtttgggtaactgtattaggaaaagag
ttttatttaggtcacagttctggacaacaggagcctcaggctgcatcgtg
tctttcttgctggcagtgccccaatgtcatgcagagcatgtctcatctct
tcttatacagccatcaggattaggtcatgattaccttatatgtccatgat
cacttccccaaggcccttccttaccacatgactgcattgaggaccagcct
ccagcaaatgaaccttgggatatgcatatgaaatgtgtccaaacatcata
ccacatttcagtagagatcatcatttcttctttcttgttttttt
gaattcatcattttgctgcatacaagaaacatacctcatcatcaaggata
gacattacttcagacaaaagtcagaaaaaaaaatctttcaagtaaatgaa
cttaagaagcaaacttctgtagccgttctaatatctaacaaaatagacct
caaaccaaaactaataaaaagagatagggaaagacactgcatgctcatca
aaggaaaaacatcaaccaagatgatttttcaattcttaacttctatgcca
caaacacaaggataaccaagtttataaaagaaacactacagcttaaatca
catactgaccctcacacactgagagtgggagacttcaaaactctcaccaa
tggacaggtcatatagacaaggaataaacagagaaatactgggcttaaaa
gatgtaaattaaatgggcctaacatatttaaagaacatttcagtcaaaca
taaaagaatataccttctactcagcaccttatgaactttctccaaaactg
atcacatagtcaggcataaagcaagcctacagatacaagaaaattgaaac
aactccttacatctcatcagaccaccatgaattaaaggttggtattatct
acaacagaaacaacagaaagcatagaaactgaacaactttactgaatgaa
aaatggattaaaacagaaataaagaaattaaaagactttctagaattcaa
taaaagtgaatacatagtatacctaaatttatagacacaatgaaagcagt
gctaagaggaaagtacatagcactaagtgcctatatttacaaaaaaattg
gagatatctcatactatcaacttaacagcacacatgaaaaaaaacccgcc
cagagtagtaaatagcagatagaaatattaaactgatagatgagtaataa
atagaacaagaataaatacaatatgaacaagattgattttgagaaatcac
agaggataatcatgatccaactagtaagtaaagaagtatggaattatcaa
atcagaagaaaatgggatatagtggacaactaagaatcgagaatcttaag
gacttcttaaagctgtactcaaatggaaaatctaaaaatggaggatattt
ccgatgggtacacttatcacggtatcaattcggacatgacaattacctat
ggaatagacgtaagttacctcccgttccaatccaggcgggagttttagca
cacttcccggtatcacag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_9509730_9510575
seq2: B6Ng01-049B10.b_45_888 (reverse)

seq1  AAAAAAACAAAGAAAGAAGAAATGATGATCTCTACTGAAATGTGGTATGA  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAC-AAGAAAGAAGAAATGATGATCTCTACTGAAATGTGGTATGA  49

seq1  TTGTTTGGACACATTTCATATGCATATCCCAAGGTTCATTTGCTGGAGGC  100
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TGTTTGGACACATTTCATATGCATATCCCAAGGTTCATTTGCTGGAGGC  98

seq1  TGGTCCTCAATGCAGTCATGTGGTAAGGAAGGGCCTTGGGGAAGTGATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCCTCAATGCAGTCATGTGGTAAGGAAGGGCCTTGGGGAAGTGATCA  148

seq1  TGGACATATAAGGTAATCATGACCTAATCCTGATGGCTGTATAAGAAGAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACATATAAGGTAATCATGACCTAATCCTGATGGCTGTATAAGAAGAG  198

seq1  ATGAGACATGCTCTGCATGACATTGGGGCACTGCCAGCAAGAAAGACACG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGACATGCTCTGCATGACATTGGGGCACTGCCAGCAAGAAAGACACG  248

seq1  ATGCAGCCTGAGGCTCCTGTTGTCCAGAACTGTGACCTAAATAAAACTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCCTGAGGCTCCTGTTGTCCAGAACTGTGACCTAAATAAAACTCT  298

seq1  TTTCCTAATACAGTTACCCAAACTCAAATATTTCACTAGAGTTACAAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCTAATACAGTTACCCAAACTCAAATATTTCACTAGAGTTACAAAAA  348

seq1  CTGGACTAACAGACATGCTTTCTGGGTATTGGATGAACAGATTTCTGAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGACTAACAGACATGCTTTCTGGGTATTGGATGAACAGATTTCTGAGA  398

seq1  CTTAGTCCTCAGAGCAACCCAGGAGTCTGGAGACCAGATTGCCATCATAC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAGTCCTCAGAGCAACCCAGGAGTCTGGAGACCAGATTGCCATCATAC  448

seq1  AACTGGCATGGTTCAAAAAAAAAAAAAAAAAAAAAAAGACTATTGTAAGC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGGCATGGTTCAAAAAAAAAAAAAAAAAAAAAAAGACTATTGTAAGC  498

seq1  TCTCAGGTACTGCTCCAGTGCAATGGCTGCCTACCTGCTACCATGCTCCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTCAGGTACTGCTCCAGTGCAATGGCTGCCTACCTGCTACCATGCTCCC  548

seq1  CGCCATGATGGTCATGGACTTTAACTGACCCCCTGAAACATGAAGCCTCA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCATGATGGTCATGGACTTTAACTGACCCCCTGAAACATGAAGCCTCA  598

seq1  ATACTCTTTCTTCTGTAAGTTGCTTGGTCACAGTGTCTTATCACAGTAAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACTCTTTCTTCTGTAAGTTGCTTGGTCACAGTGTCTTATCACAGTAAT  648

seq1  AGGAAAGCAACTGAAATGTGAACTATGTCTACATGCCCGTGAATTCCCCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAAGCAACTGAAATGTGAACTATGTCTACATGCCCGTGAATTCCCCA  698

seq1  AGGACTGAGTCTCATGACTGACCTACTACTGTTCTCCACTCTCCTTTTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGACTGAGTCTCATGACTGACCTACTACTGTTCTCCACTCTCCTTTTCT  748

seq1  CACCCTGTCAAACAGCAATAGTAGAAGCAAGCATGGAACAGACTCCCTGC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCCTGTCAAACAGCAATAGTAGAAGCAAGCATGGAACAGACTCCCTGC  798

seq1  CAAAAAACATTAAGGTACATCAAGGAAATTATTTTTAAGTGAATTC  846
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAAACATTAAGGTACATCAAGGAAATTATTTTTAAGTGAATTC  844