MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-049E20
Chromosome	16 (Build37)
Map Location	51,249,347 - 51,250,423
singlet/doublet	singlet
Overlap gene	none
Upstream gene	Bbx, LOC100043414, Ccdc54, LOC672778, 5330426P16Rik, EG639820
Downstream gene	LOC627543, Cblb
Link	Open Mouse BAC browser

Click to get alignment info.

name	Bbx (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:70508 MGI:1917758
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043414 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Ccdc54 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:69339 MGI:1916589
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC672778 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:672778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 70 Proteins pseudo : _no_value

name	5330426P16Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:68190 MGI:1915440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 29 ESTs

name	EG639820 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:639820 MGI:3643369
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 Proteins pseudo : _no_value

name	LOC627543 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:627543
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 9204 ESTs, 13 Proteins pseudo : _no_value

name	Cblb (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208650 MGI:2146430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Bbx (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141802692 GeneID:70508 MGI:1917758
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : bobby sox homolog (Drosophila) transcript_id : NM_027444.2

name	LOC100043414 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267433 GeneID:100043414
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : hypothetical protein LOC100043414 transcript_id : XM_001480110.1

name	Ccdc54 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141801673 GeneID:69339 MGI:1916589
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : coiled-coil domain containing 54 transcript_id : NM_027046.3

name	5330426P16Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267438 GeneID:68190 MGI:1915440
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 4 mRNAs, 29 ESTs product : RIKEN cDNA 5330426P16 gene transcript_id : XM_992800.2

name	Cblb (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118344447 GeneID:208650 MGI:2146430
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : Casitas B-lineage lymphoma b transcript_id : NM_001033238.1

name	Bbx (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:18378727 GeneID:70508 MGI:1917758
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_process : GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation product : HMG-BOX transcription factor BBX protein_id : NP_081720.1

name	LOC100043414 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267434 GeneID:100043414
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480160.1

name	Ccdc54 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312272 CCDS:CCDS28214.1 GeneID:69339 MGI:1916589
definition	codon_start : 1 product : testes development-related NYD-SP17 protein_id : NP_081322.1

name	5330426P16Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267439 GeneID:68190 MGI:1915440
definition	codon_start : 1 product : hypothetical protein LOC68190 protein_id : XP_997894.2

name	Cblb (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:118344448 GeneID:208650 MGI:2146430
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0005509 - calcium ion binding [Evidence IEA]; GO:0016874 - ligase activity [Evidence IEA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0007166 - cell surface receptor linked signal transduction [Evidence IEA]; GO:0006955 - immune response [Evidence IMP]; GO:0007242 - intracellular signaling cascade [Evidence IEA] [Evidence IMP]; GO:0050860 - negative regulation of T cell receptor signaling pathway [Evidence IMP]; GO:0042110 - T cell activation [Evidence IMP]; GO:0006512 - ubiquitin cycle [Evidence IEA] codon_start : 1 product : Casitas B-lineage lymphoma b protein_id : NP_001028410.1

name	EG639820 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:639820
definition	number : 1 pseudo : _no_value

name	LOC672778 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267436 GeneID:672778
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 19 ESTs, 70 Proteins product : similar to protease (prosome, macropain) 26S subunit, ATPase 1 pseudo : _no_value transcript_id : XR_034545.1

name	LOC627543 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149267553 GeneID:627543
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 6 mRNAs, 9204 ESTs, 13 Proteins product : similar to eukaryotic translation elongation factor 1 alpha 1 pseudo : _no_value transcript_id : XR_035012.1

clone name	MSMg01-355F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479E10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-323E24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-424D07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337N04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-507F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-092C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-482J20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-093E01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-477O05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431A23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-393F21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-389A22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-428M20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-326L24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-065P17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357E22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-087G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-194C15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-062G05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079P20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-208G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-309K10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-260M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-172P04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-520G15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-192F22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-510G02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-079B09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-076M02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-466M22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-491F02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-136O02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323K16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-111D24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-173O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156N14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362O10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467D18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-166G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-130M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408C16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475H07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-517F19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-099D20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-521G04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-084E08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496A17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-291F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-123C15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-320K08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-170F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-312C14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-273L17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-337E15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-456L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-411C10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-363M16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440P06
singlet/doublet	singlet
plural/unique	plural

clone name	MSMg01-359O04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-338G16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-148B08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385A22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-441E04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500D05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-362F06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-537F14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-365G14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-348J14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-072F08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-365A10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-191P06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-191P08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-139H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-049J02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-436L07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-505A13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-051J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-120F08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-408K24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-503C23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-340E15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-402I17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292J21
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-433L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-304I07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-332F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-516N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467E07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-164N13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-261A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-457G03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493A04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-305L09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-488E18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-056P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-501I14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-375C05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-442C23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-372A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-506I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-493M04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-416H13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-279L14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-279P23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-333L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-494K19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162D06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-316J07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-154P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-069F24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-526D12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216P17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-087H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164M18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-338M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225D10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-032H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-239J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-150J07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-174D16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-207F05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-051M14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-047L05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-324L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-222I22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-330D15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-059G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-178N01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182P09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-221O05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-173B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345E09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-229D01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-259A11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-312O12
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-298F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232A22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-007L15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-036G13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-198C07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-247M17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347C18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347I03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347A20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015L04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-205D08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249A08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041P05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-134M23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-110C01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-316H15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-119D12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-350F10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210E10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-210P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-326I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-049E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-143F16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302M06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099P12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084F23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303D23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-218O02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-266M20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-169M03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-323O11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-223L18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-105O17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-151M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-185G05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-269B17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-080J20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-118D22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-171N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-318C24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-024I12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-313F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-129G17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-339E11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-202B03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-225F01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142D19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-219I03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-161N02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-238M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-078J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-153L08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-049E20.b	B6Ng01-049E20.g
ACC	DH873606	DH873607
length	1,041	1,149
definition	DH873606\|Mus musculus domesticus DNA, BAC clone: B6Ng01-049E20, 5' end.	DH873607\|Mus musculus domesticus DNA, BAC clone: B6Ng01-049E20, 3' end.
singlet/doublet	singlet	---
BLAST hit	unique	no hit data
sequence	gaattccatgagaacaaggagagctatgccacaaaccagaaacctgcacc agagattaagaggatgttttgttggtcacttgattgcataagttgccagg caggtatcgtgtagatgatagagttgtatttcagtgtcaaaagtgaacat ttttaagaattttaagagtaaattctaatgtctctggctttatgtccaaa taattattcaattttaattaaaacattcactattaaaatatctgaaggtt agggactccgagtgactttgaacctcaagagccccatatattgtattact gtaactcatcaggtcgctacagcaagcatagactttatgtgaatgtgaaa ttaggcactataacatctgtttgccttcctgacattgacagctcttaggt catatgtagtgaacactgtgtctgtggaaagggcatgttcagatttttcc ttatttctcacagctttcatctatagatgaagaaactgaaaccacgcgtt aatcagatcagctcatctccacagcctgtgtttcatcatgcatgactatg agaaagagaaagcaaacacagaacatatcacattacaatgacctatgtaa atacgccagggctattttataattcacaacacacattttgaaagttgatg tgatctgtttaaagaagagtttaagcctgaaagctctatgagcttcctag tgatatcattttgtagtgaggatgatttcttttcctcaatttataagctg gcctcctggtcttttgaaatgtggttattttgctacccatatttgtgctg gtgtgttattgttgttgtattattaaagtacatgtacccacttgagaaaa aaatgatttatgaaacgcaaagggctacatgacagtccacaaagccagac agtatcaacgtgtagtatgtcatggattagtgaaataaatagagcacttt agcttgaaagttgatatcagaacattggtctgaaacttccaacttctact aactactgtcctgcttaagagaataatgtgtctgtgctgag	gaattcaattttcagaaataaaggatcttaaagtatcaaggtttaagaat taaaaagtagacaggaaatatgggtgtatccatgagcatgggagaacttt ccatcttctgagatcttctttaatttctttattcagacacttgaagttct tatcatatagatctttcatttccttagttagagtcacaccaaggtattta atattatttgtgagtattgtgaagggtgttgtttccctaaattatttctc agcctgcttatcctttgtgtagagaaagaccattgacttttttgagctat acttcactgaagctgtatttcaggtttaggacccgacctaaagctgtact acagagcaattgtgatcaaaactgcatagtactgttatagcaacagacaa gtagaccaatggaatagagttgaagaccaaacccacacacctatggtcac tttatctttgacaaggaatctaaaaccatccagtggaaaaaaagacagca ttttcaacaaatggtgctggcacaactggtgattatcatgtagaagaatg tgaattgatccattcctatctccttgtactaagggtcaaatctaagtgga tcaagggagctccacataaaaccagagacagtgaaacttatataggagaa agtgggggttaaacttctaagatatggggcacagggaaaaaattcctgaa tagaacagcaatggcttttgctggaagattgagattggacaaatgggacc tcatagaatgcaaagcttctgtaaggcaaaagacacttgtcatagacaaa agggcccaacagattgggaacggatcttactatcctaaatcgataggggc ctatagtaataatacaaagagctcaagaagctggactcagagctaagaag aattctcacttgaggatactgatggcttagagcacttgaaagtgttcaca tcttatcatcagggaatgcaaatcaaacaccctgaattccacttccacta gtcggattgctagatcaaactcagtgacgcgatgatgtgaggatgtgtga gaggaacatctctcattgttggggatgcagctggcacatccggaaagtct ggatacttaaatggacatttattgagggtcgcaactctctctggtgtat
quality values	Open. Hide. 61 47 35 43 61 61 39 14 61 61 61 61 61 43 61 43 47 61 61 61 55 61 61 61 61 61 59 38 43 43 12 28 20 21 27 26 24 30 45 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 61 61 61 59 61 59 61 59 43 61 61 61 61 59 59 52 59 44 35 59 59 59 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 61 61 61 61 61 61 61 61 55 55 59 61 61 61 61 61 55 55 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 50 61 61 61 47 61 61 53 61 61 61 61 61 61 61 61 61 53 53 61 61 61 61 61 53 61 50 53 43 53 61 61 61 61 61 45 61 61 61 45 53 43 61 53 50 53 61 61 47 61 61 42 47 57 57 57 47 47 46 57 32 53 53 57 53 57 40 40 50 38 53 53 42 47 45 52 32 47 53 53 53 42 43 53 45 53 53 27 53 42 50 50 53 45 53 40 53 36 29 57 41 36 47 47 34 50 53 42 34 53 53 52 40 40 40 52 45 52 30 53 57 57 45 53 45 50 57 47 37 42 28 57 50 53 30 52 21 38 46 35 50 31 53 25 36 52 40 50 42 52 41 29 40 22 37 42 53 42 40 52 35 36 33 42 27 42 57 40 38 33 38 12 35 41 31 36 57 53 29 37 30 17 57 57 40 28 24 10 46 18 34 31 28 37 20 36 37 20 36 18 37 25 35 57 57 34 18 20 57 30 24 31 30 37 36 20 37 21 36 23 32 37 30 37 13 57 18 12 57 37 16 17 30 9 40 11 27 51 23 16 30 25 28 24 27 29 21 47 31 24 27 28 29 24 27 27 30 30 16 39 28 36 31 38 23 27 31 34 35 28 10 15 22 39 29 29 46 46 28 30 22 38 33 31 38 28 14 33 16 16 27 29 16 46 29 16 10 46 39 5 10 21 19 29 21 23 36 51 28 14 18 23 41 28 33 29 28 29 29 18 21 9 29 23 29 46 16 23 8 41 39 5 32 11 41 27 8 26 10 7 19 15 13 26 20 51 46 9 24 22 26 16 16 28 19 10 6 15 20 46 12 21 21 10 14 14 19 14 29 22 18 30 10 12 17 7 5 11 7 20 29 23 6 15 29 16 21 20 20 9 32 15 36 27 23 16 15 27 14 15 12 16 12 39 39 17 10 18 21 21 6 12 6 19 42 38 34 28 29 9 19 25 19 12 51 33 12 15 27 27 28 10 6 5 6 14 30 9 22 30 18 19 33 14 18 5 16 23 15 8 5 8 4 7 5 4 4 9 35 10 11 20 17 11 11 12 7 30 4 4 7 31 17 16 33 23 11 21 31 13 23 27 10 21 13 24 29 8 10 7 25 17 25 21 21 18 7 9 22 29 37 8 5 20 31 12 7 18 10 26 8 29 5 8 8 33 29 22 10 29 8 6 13 8 34 5 12 5 5 16 6 5 5 16 14 8 4 10 3 4 4 7 13 26 9 5 11 10 14 22 22 10 8 11 23 14 11 9 10 9 17 10 11 15 12 5 4 9 5 10 8 13 6 16 6 10 15 9 26 11 9 7 9 12 6 14 12 6 16 18 4 10 7 3 6 6 14 7 5 3 5 10 16 12 4 9 16 3	Open. Hide. 61 61 35 47 61 47 19 18 19 20 22 28 24 13 11 39 52 55 61 52 61 61 55 61 47 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 59 59 52 52 36 36 32 37 59 59 59 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 55 61 61 61 61 61 55 61 55 55 61 55 61 61 50 55 61 55 55 55 61 61 55 55 55 61 61 55 61 61 61 61 61 55 55 61 55 61 55 61 61 61 61 61 50 61 55 47 36 61 61 61 61 61 50 61 53 61 43 61 61 61 61 61 61 61 50 53 43 61 61 61 61 50 61 53 53 61 61 52 47 50 32 50 50 61 61 61 52 61 45 53 61 61 61 50 61 35 61 61 61 33 61 50 61 47 53 61 61 61 61 61 46 38 53 43 39 52 43 31 39 61 61 50 50 25 45 50 28 46 32 45 57 53 32 47 42 50 53 57 34 38 45 35 34 47 42 47 47 26 53 39 20 21 30 34 50 39 50 52 30 50 36 53 53 18 47 23 25 35 30 43 45 45 34 46 52 27 36 40 53 18 50 57 30 57 28 38 38 45 27 23 46 21 26 50 27 21 42 38 38 29 12 57 34 8 42 24 57 33 32 38 25 24 43 28 28 36 21 18 14 27 30 37 28 57 24 28 20 39 40 30 47 8 50 21 33 9 57 57 34 26 30 14 30 46 20 21 20 20 31 29 35 33 57 12 18 40 32 20 32 18 30 33 32 25 35 12 37 38 35 24 25 24 53 53 53 31 10 35 13 53 20 57 7 22 36 33 20 53 12 33 12 17 23 10 57 53 18 24 20 28 17 21 57 34 39 57 57 38 42 32 30 35 39 25 30 30 34 24 23 22 8 37 17 27 23 10 34 29 17 28 15 45 10 16 6 5 5 8 9 21 20 27 40 35 10 35 10 11 9 17 12 31 18 25 32 29 27 17 17 44 14 20 22 51 11 29 24 29 25 25 7 32 18 6 14 10 12 9 19 10 45 25 19 28 27 24 21 11 23 18 27 22 27 31 6 21 51 39 30 10 27 11 9 21 22 9 13 14 17 11 16 17 4 12 10 7 39 46 39 8 30 18 14 11 7 5 13 8 7 5 18 13 20 20 43 7 26 18 15 11 9 20 20 14 38 39 9 23 8 7 16 10 13 14 7 36 10 22 10 5 8 8 11 30 51 36 8 7 28 23 28 9 11 18 27 30 12 5 4 4 8 8 14 12 27 12 11 21 19 19 22 14 7 27 13 29 22 5 13 20 15 29 14 19 21 19 13 12 31 14 28 14 33 19 11 31 16 5 9 29 20 14 27 19 23 11 16 10 20 9 11 12 13 38 10 15 19 31 35 38 17 25 23 19 24 19 10 5 17 10 29 12 30 9 9 12 23 6 18 4 9 26 17 7 6 19 8 5 6 16 6 9 16 12 17 8 13 21 9 11 30 9 38 22 26 34 14 8 35 18 18 15 14 35 20 11 8 6 16 7 4 4 4 8 5 5 6 26 6 7 11 10 17 7 6 6 5 15 9 13 18 6 6 19 6 6 26 13 18 27 9 8 7 5 10 22 17 8 6 6 3 3 3 13 6 7 8 8 4 6 6 14 19 5 3 7 8 8 9 8 9 5 5 5 8 3 3 9 3 9 6 4 7 14 10 4 4 5 6 16 7 22 8 17 9 9 5 2 4 26 32 11 13 22 5 10 16 5 4 3 4 3 2 5 4 4 3 3 3 3 3 4 7 2 3 4 5 7 9 4 3 4 1 5 7 4 6 13 5 16 6 12 5 4 7 7 3 1 4 7 9 9 4 6 12 4 1 11 3 6 6 5 10 8 6 6 14 16 18 7 19 10 5 5 5 5 8

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_51249347_51250423
seq2: B6Ng01-049E20.b_46_1086 (reverse)

seq1  CTCAGCACAGACACACTTATTTTCTTCCTTAATAGCAAGGACAAGTTTAG  50
      ||||||||||||||| ||||| ||||       ||| ||||||    |||
seq2  CTCAGCACAGACACA-TTATTCTCTT------AAGC-AGGACA---GTAG  39

seq1  TTTAGCTAAGAAGTTGGAAGTTTCAGACCCAAATGTTTTCTTGATAATTC  100
       ||||   |||||||||||||||||||||  ||||||    |||||    
seq2  -TTAG--TAGAAGTTGGAAGTTTCAGACC--AATGTT---CTGATA---T  78

seq1  CACCTTTCAAGGCTAAAGTGGCTTCTATTTTATTTTCACTAAATCCATGA  150
      || ||||||| |||||||||   |||||||   ||||||| |||||||| 
seq2  CAACTTTCAA-GCTAAAGTG--CTCTATTT--ATTTCACT-AATCCATG-  121

seq1  ACATACTACACGTTTGAATACTTGTCTGGGCTTTGTGGACTGTCATGTAG  200
      ||||||||||||||   |||| ||||| ||||||||||||||||||||||
seq2  ACATACTACACGTT--GATAC-TGTCT-GGCTTTGTGGACTGTCATGTAG  167

seq1  CCCTTTGCTGTTTCATAAATCATTTTTTTTCTCAAGTGGGTACATGTACT  250
      |||||||| ||||||||||||| |||||||||||||||||||||||||||
seq2  CCCTTTGC-GTTTCATAAATCA-TTTTTTTCTCAAGTGGGTACATGTACT  215

seq1  TTAAATAATAACAACAACAATAACAACAACAGCAACAAATAT-GGTAGCA  299
      || |||||| |||||||||||||| ||| |||| |||||||| |||||||
seq2  TT-AATAAT-ACAACAACAATAAC-ACACCAGC-ACAAATATGGGTAGCA  261

seq1  AAATAA-CACATTTCCAAAGACCAGGAGGCCAGCTTATAAATTGAGG-AA  347
      |||||| |||||||| ||||||||||||||||||||||||||||||| ||
seq2  AAATAACCACATTTCAAAAGACCAGGAGGCCAGCTTATAAATTGAGGAAA  311

seq1  AGAAATCATCCTCACTACAAAATGATATCACTAGGAAGCTCATAGAGCTT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATCATCCTCACTACAAAATGATATCACTAGGAAGCTCATAGAGCTT  361

seq1  TCAGGCTTAAACTCTTCTTTAAACAGATCACATCAACTTTCAAAATGTGT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGCTTAAACTCTTCTTTAAACAGATCACATCAACTTTCAAAATGTGT  411

seq1  GTTGTGAATTATAAAATAGCCCTGGCGTATTTACATAGGTCATTGTAATG  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGTGAATTATAAAATAGCCCTGGCGTATTTACATAGGTCATTGTAATG  461

seq1  TGATATGTTCTGTGTTTGCTTTCTCTTTCTCATAGTCATGCATGATGAAA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATATGTTCTGTGTTTGCTTTCTCTTTCTCATAGTCATGCATGATGAAA  511

seq1  CACAGGCTGTGGAGATGAGCTGATCTGATTAACGCGTGGTTTCAGTTTCT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGGCTGTGGAGATGAGCTGATCTGATTAACGCGTGGTTTCAGTTTCT  561

seq1  TCATCTATAGATGAAAGCTGTGAGAAATAAGGAAAAATCTGAACATGCCC  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATCTATAGATGAAAGCTGTGAGAAATAAGGAAAAATCTGAACATGCCC  611

seq1  TTTCCACAGACACAGTGTTCACTACATATGACCTAAGAGCTGTCAATGTC  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCACAGACACAGTGTTCACTACATATGACCTAAGAGCTGTCAATGTC  661

seq1  AGGAAGGCAAACAGATGTTATAGTGCCTAATTTCACATTCACATAAAGTC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGGCAAACAGATGTTATAGTGCCTAATTTCACATTCACATAAAGTC  711

seq1  TATGCTTGCTGTAGCGACCTGATGAGTTACAGTAATACAATATATGGGGC  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGCTTGCTGTAGCGACCTGATGAGTTACAGTAATACAATATATGGGGC  761

seq1  TCTTGAGGTTCAAAGTCACTCGGAGTCCCTAACCTTCAGATATTTTAATA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTGAGGTTCAAAGTCACTCGGAGTCCCTAACCTTCAGATATTTTAATA  811

seq1  GTGAATGTTTTAATTAAAATTGAATAATTATTTGGACATAAAGCCAGAGA  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGTTTTAATTAAAATTGAATAATTATTTGGACATAAAGCCAGAGA  861

seq1  CATTAGAATTTACTCTTAAAATTCTTAAAAATGTTCACTTTTGACACTGA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTAGAATTTACTCTTAAAATTCTTAAAAATGTTCACTTTTGACACTGA  911

seq1  AATACAACTCTATCATCTACACGATACCTGCCTGGCAACTTATGCAATCA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACAACTCTATCATCTACACGATACCTGCCTGGCAACTTATGCAATCA  961

seq1  AGTGACCAACAAAACATCCTCTTAATCTCTGGTGCAGGTTTCTGGTTTGT  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGACCAACAAAACATCCTCTTAATCTCTGGTGCAGGTTTCTGGTTTGT  1011

seq1  GGCATAGCTCTCCTTGTTCTCATGGAATTC  1077
      ||||||||||||||||||||||||||||||
seq2  GGCATAGCTCTCCTTGTTCTCATGGAATTC  1041

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information