BAC Information

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BAC

Clone NameB6Ng01-059G07
Chromosome16 (Build37)
Map Location 50,787,755 - 50,938,332
singlet/doubletdoublet
Overlap genenone
Upstream geneLOC100043767, Cd47, EG433024, LOC100043769, LOC628951, EG224180, EG667802, LOC100043404, Bbx, LOC100043414, Ccdc54, LOC672778, 5330426P16Rik
Downstream geneEG639820, LOC627543
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-059G07.bB6Ng01-059G07.g
ACCDH880689DH880690
length1,1271,022
definitionDH880689|Mus musculus domesticus DNA, BAC clone: B6Ng01-059G07, 5' end.DH880690|Mus musculus domesticus DNA, BAC clone: B6Ng01-059G07, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(50,787,755 - 50,788,897)(50,937,308 - 50,938,332)
sequence
gaattcctttcatctacaataaccgggagtttatgtaattggctgttaga
tatctctccattgtgattgatgaatacagcatactatataatacatcgtg
atgtccataaaattagagagtaatcacattccagggcttatcatagattt
ccaagaacattctgagatcatatgtaaaagaataataatgtgcatttttt
ttctggaaggagaaaccacagcgctcattagatcctcaggaagctgcttc
ccagtgttctgactggctgttccaaggcttcctccacaaacagagacatt
gatttccctgagggaattcagctccagtgatgtccttaaaaccttcgcta
ggctatgggagccccttgacctcagtggatgatgttactgacttaccatc
ctgaaggccaaccttcaagagtatgtgtggcgctaggaagaggaaatgtc
ctaacaaacagttgcattaaaagccgtataaattaagtatttctctgtgt
gcttgtgcatgaaatgctttatggtgtactggtttccatgccaactagtg
ctttatattatcttgctcttctaggacttagtacgttgatttgatcacct
tactttctgatgtgtctttgggaaatggcaagcctgaggaaaagagttaa
gggcatctttagtataaggtcagagcaaaaacatttgttctttttgacaa
gagtcattcagaatgaaaaaccaactctatttctaccttgtctgtgctga
aaattaccaagaaagagttatatctatactaatactatattcagaggtag
attgaaatgttttagggcccgaggcttatacaattttgaacatatattta
gaaagatattatattttgtgaaatcagtcatggtagggaccttttcaagg
ccttgagcaagtgtttagcttcatcagcagtagcccacaagacccattca
cgaggggtaaagacctaactttgaaatgtttgcattgtgagcactttcat
ttcactttagttgtaattgctctccctttctgactactacagccaaacgt
cattcatgtgactttgggtattgttcttaaaagatgagtacactaccatg
ggagcagtccggaagtccatcaggttt
gaattcaccaaagcacaaaatcaaacgtctttcaccccggtagatagatg
ttcattcagttgctccgccccagagaaaacctaaaacccctggtgtttca
ctaatgacaatccagttaaactctctaactgcttttgtaaaaatgaatac
ttgcaagactgtcttgttggtatatgatacaagcagcttcagattctagt
atctagaccttagaatttaatttaaaatacatttatttatgagaactgca
tgttttacctttgtaatgtcttcactataagttgattaaaatgatttgac
acatataattcatgaatacttggttgaatgaaaataaggatataaaaagg
acaagggagaaagctatcactgtatcaattctggactcctcccagagaag
ccacagccctccactggctaaagctcccttcacttctccactggtttaga
tttgagtggaaaacatcactcacattcacatatagggttcacatacacta
ggtaatcttatatgtacatattatgtcatatttcatgtatagtttatatg
aatgcaaatctataagcgtattgtcatttaaatattgaggaaaacctttg
ctttttcttcaattttgagacattctagtaaatattgaatcaaatatttt
cctttttttccctatatattttactgtctattcctcatttatttgtgatg
ctttcttatatgttaacaatactactaaataacacttaatattgacattt
tcataatatctatggtgcgggtatattttgattttttttgttcaaatttt
ccattataagttttccttgtgagttatttttgaaagtcttttccacttaa
aaagtgaatgtacaagctggaacgagtgctccatgggtatagtcacttcc
caaacaagctgtgacctgagttaaatctctggatccacataagtaaagga
agaggacggaccttacacactgtttttggctcatcatgtgttatgaggtt
aaacaacactaccactacacac
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_50787755_50788897
seq2: B6Ng01-059G07.b_43_1169

seq1  GAATTCCTTTCATCTACAATAACCGGGAGTTTATGTAATTGGCTGTTAGA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCTTTCATCTACAATAACCGGGAGTTTATGTAATTGGCTGTTAGA  50

seq1  TATCTCTCCATTGTGATTGATGAATACAGCATACTATATAATACATCGTG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCTCCATTGTGATTGATGAATACAGCATACTATATAATACATCGTG  100

seq1  ATGTCCATAAAATTAGAGAGTAATCACATTCCAGGGCTTATCATAGATTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTCCATAAAATTAGAGAGTAATCACATTCCAGGGCTTATCATAGATTT  150

seq1  CCAAGAACATTCTGAGATCATATGTAAAAGAATAATAATGTGCATTTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGAACATTCTGAGATCATATGTAAAAGAATAATAATGTGCATTTTTT  200

seq1  TTCTGGAAGGAGAAACCACAGCGCTCATTAGATCCTCAGGAAGCTGCTTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTGGAAGGAGAAACCACAGCGCTCATTAGATCCTCAGGAAGCTGCTTC  250

seq1  CCAGTGTTCTGACTGGCTGTTCCAAGGCTTCCTCCACAAACAGAGACATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGTGTTCTGACTGGCTGTTCCAAGGCTTCCTCCACAAACAGAGACATT  300

seq1  GATTTCCCTGAGGGAATTCAGCTCCAGTGATGTCCTTAAAACCTTCGCTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTTCCCTGAGGGAATTCAGCTCCAGTGATGTCCTTAAAACCTTCGCTA  350

seq1  GGCTATGGGAGCCCCTTGACCTCAGTGGATGATGTTACTGACTTACCATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATGGGAGCCCCTTGACCTCAGTGGATGATGTTACTGACTTACCATC  400

seq1  CTGAAGGCCAACCTTCAAGAGTATGTGTGGCGCTAGGAAGAGGAAATGTC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAGGCCAACCTTCAAGAGTATGTGTGGCGCTAGGAAGAGGAAATGTC  450

seq1  CTAACAAACAGTTGCATTAAAAGCCGTATAAATTAAGTATTTCTCTGTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACAAACAGTTGCATTAAAAGCCGTATAAATTAAGTATTTCTCTGTGT  500

seq1  GCTTGTGCATGAAATGCTTTATGGTGTACTGGTTTCCATGCCAACTAGTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGCATGAAATGCTTTATGGTGTACTGGTTTCCATGCCAACTAGTG  550

seq1  CTTTATATTATCTTGCTCTTCTAGGACTTAGTACGTTGATTTGATCACCT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTATATTATCTTGCTCTTCTAGGACTTAGTACGTTGATTTGATCACCT  600

seq1  TACTTTCTGATGTGTCTTTGGGAAATGGCAAGCCTGAGGAAAAGAGTTAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTTCTGATGTGTCTTTGGGAAATGGCAAGCCTGAGGAAAAGAGTTAA  650

seq1  GGGCATCTTTAGTATAAGGTCAGAGCAAAAACATTTGTTCTTTTTGACAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGCATCTTTAGTATAAGGTCAGAGCAAAAACATTTGTTCTTTTTGACAA  700

seq1  GAGTCATTCAGAATGAAAAACCAACTCTATTTCTACCTTGTCTGTGCTGA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCATTCAGAATGAAAAACCAACTCTATTTCTACCTTGTCTGTGCTGA  750

seq1  AAATTACCAAGAAAGAGTTATATCTATACTAATACTATATTCAGAGGTAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTACCAAGAAAGAGTTATATCTATACTAATACTATATTCAGAGGTAG  800

seq1  ATTGAAATGTTTTAGGGCCCGAGGCTTATACAATTTTGAACATATATTTA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  ATTGAAATGTTTTAGGGCCCGAGGCTTATACAATTTTGAACATATATTT-  849

seq1  AGAAAGATATTATATTTTGTGAATTCAGTCATGGTAGGGACCTTTTCAAG  900
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AGAAAGATATTATATTTTGTGAAATCAGTCATGGTAGGGACCTTTTCAAG  899

seq1  GCCTTGAGCAAGTGTTTAGCTTCATCAGCAGTAGCCCACAAAGACCCATT  950
      ||||||||||||||||||||||||||||||||||||||| ||||||||||
seq2  GCCTTGAGCAAGTGTTTAGCTTCATCAGCAGTAGCCCAC-AAGACCCATT  948

seq1  CACGAGGGGTAAAGACCTAACTTTGAAATGTTTGCATTGTGAGCACTTTC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||| 
seq2  CACGAGGGGTAAAGACCTAACTTTGAAATGTTTGCATTGTGAGCACTTT-  997

seq1  CATTTCACTTTAGTTTGTAATTGCTCTCACCTTTCTGACTACTATCTAGC  1050
      ||||||||||||| |||||||||||||| |||||||||||||||   |||
seq2  CATTTCACTTTAG-TTGTAATTGCTCTC-CCTTTCTGACTACTA--CAGC  1043

seq1  CAAAACGTCATTCAATGTGACTTTGGGGTATTTGTGTCCTTAAAAGAGTG  1100
      | ||||||||||| |||||||||| ||||||   ||| ||||||||| ||
seq2  C-AAACGTCATTC-ATGTGACTTT-GGGTAT---TGTTCTTAAAAGA-TG  1086

seq1  AGTACCACTACCAT-GGAGCAGTTCAGGAAAGTCCATCAAGTTT  1143
      |||| ||||||||| |||||||| |  | |||||||||| ||||
seq2  AGTA-CACTACCATGGGAGCAGTCC--GGAAGTCCATCAGGTTT  1127

seq1: chr16_50937308_50938332
seq2: B6Ng01-059G07.g_68_1089 (reverse)

seq1  GTGTGT-------GTGTGTGTTTATACCTCATAACACATGTATGGAGGCC  43
      ||||||       |||| |||||| ||||||||||||||| |||   |||
seq2  GTGTGTAGTGGTAGTGT-TGTTTA-ACCTCATAACACATG-ATG--AGCC  45

seq1  AGAGAACAGTGTTGTAAGGTCCGTCCTCTTCCTTTACTTTATGTGGATTC  93
      | | ||||||| ||||||||||||||||||||||||| ||||||||| ||
seq2  A-AAAACAGTG-TGTAAGGTCCGTCCTCTTCCTTTAC-TTATGTGGA-TC  91

seq1  CAGAGATTTAACTCAGGTCACCAGCTTGTGTGGGAAGTGACTATACCCAT  143
      |||||||||||||||||||| |||||||| ||||||||||||||||||||
seq2  CAGAGATTTAACTCAGGTCA-CAGCTTGTTTGGGAAGTGACTATACCCAT  140

seq1  GGAGCACTCGTTCCAGCTTGTACATTCACTTTTTAAGTGGAAAAGACTTT  193
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCACTCGTTCCAGCTTGTACATTCACTTTTTAAGTGGAAAAGACTTT  190

seq1  CAAAAATAACTCACAAGGAAAACTTATAATGGAAAATTTGAACAAAAAAA  243
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAATAACTCACAAGGAAAACTTATAATGGAAAATTTGAACAAAAAAA  240

seq1  ATCAAAATATACCCGCACCATAGATATTATGAAAATGTCAATATTAAGTG  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCAAAATATACCCGCACCATAGATATTATGAAAATGTCAATATTAAGTG  290

seq1  TTATTTAGTAGTATTGTTAACATATAAGAAAGCATCACAAATAAATGAGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTAGTAGTATTGTTAACATATAAGAAAGCATCACAAATAAATGAGG  340

seq1  AATAGACAGTAAAATATATAGGGAAAAAAAGGAAAATATTTGATTCAATA  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAGACAGTAAAATATATAGGGAAAAAAAGGAAAATATTTGATTCAATA  390

seq1  TTTACTAGAATGTCTCAAAATTGAAGAAAAAGCAAAGGTTTTCCTCAATA  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTACTAGAATGTCTCAAAATTGAAGAAAAAGCAAAGGTTTTCCTCAATA  440

seq1  TTTAAATGACAATACGCTTATAGATTTGCATTCATATAAACTATACATGA  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATGACAATACGCTTATAGATTTGCATTCATATAAACTATACATGA  490

seq1  AATATGACATAATATGTACATATAAGATTACCTAGTGTATGTGAACCCTA  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATATGACATAATATGTACATATAAGATTACCTAGTGTATGTGAACCCTA  540

seq1  TATGTGAATGTGAGTGATGTTTTCCACTCAAATCTAAACCAGTGGAGAAG  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGTGAATGTGAGTGATGTTTTCCACTCAAATCTAAACCAGTGGAGAAG  590

seq1  TGAAGGGAGCTTTAGCCAGTGGAGGGCTGTGGCTTCTCTGGGAGGAGTCC  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGGGAGCTTTAGCCAGTGGAGGGCTGTGGCTTCTCTGGGAGGAGTCC  640

seq1  AGAATTGATACAGTGATAGCTTTCTCCCTTGTCCTTTTTATATCCTTATT  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAATTGATACAGTGATAGCTTTCTCCCTTGTCCTTTTTATATCCTTATT  690

seq1  TTCATTCAACCAAGTATTCATGAATTATATGTGTCAAATCATTTTAATCA  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCATTCAACCAAGTATTCATGAATTATATGTGTCAAATCATTTTAATCA  740

seq1  ACTTATAGTGAAGACATTACAAAGGTAAAACATGCAGTTCTCATAAATAA  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTATAGTGAAGACATTACAAAGGTAAAACATGCAGTTCTCATAAATAA  790

seq1  ATGTATTTTAAATTAAATTCTAAGGTCTAGATACTAGAATCTGAAGCTGC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATTTTAAATTAAATTCTAAGGTCTAGATACTAGAATCTGAAGCTGC  840

seq1  TTGTATCATATACCAACAAGACAGTCTTGCAAGTATTCATTTTTACAAAA  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTATCATATACCAACAAGACAGTCTTGCAAGTATTCATTTTTACAAAA  890

seq1  GCAGTTAGAGAGTTTAACTGGATTGTCATTAGTGAAACACCAGGGGTTTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGTTAGAGAGTTTAACTGGATTGTCATTAGTGAAACACCAGGGGTTTT  940

seq1  AGGTTTTCTCTGGGGCGGAGCAACTGAATGAACATCTATCTACCGGGGTG  993
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTTCTCTGGGGCGGAGCAACTGAATGAACATCTATCTACCGGGGTG  990

seq1  AAAGACGTTTGATTTTGTGCTTTGGTGAATTC  1025
      ||||||||||||||||||||||||||||||||
seq2  AAAGACGTTTGATTTTGTGCTTTGGTGAATTC  1022