BAC Information

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BAC

Clone NameB6Ng01-061B10
Chromosome16 (Build37)
Map Location 81,019,858 - 81,020,930
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC621365, LOC100039724
Downstream geneNcam2, LOC621470, LOC435484, Pgk1-ps1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-061B10.g
ACCDH881869
length1,059
definitionDH881869|Mus musculus domesticus DNA, BAC clone: B6Ng01-061B10, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcacttttgcacctgcgtacaacgcttctttactagttaggcacag
tggaggcccgcgccatcttataatggggattgcttgcggcacacacggct
ctcctcagagattactggcggcacacatgcgattgctcgcagcacgtacc
ggctctccacagatagatagatagatagatagatagatagatagatagat
agatagataagacagatggacagagagagaaagggcaagagaaaaatgat
ttaaaaagaagaggtcatgaatttgagagaaaatgttgagagacaggaga
aattggataaaggagattggaaataatatgaatacagcaaacatgtaaaa
attcataaaaacaaagttaatttaaaaatctctaagtattttggaaatct
ttttatgttcaggcaatgagtgagaccacttcatcaggtaattatcttta
aaaataagtcattgccattggagactccagggcactggagatgctatgac
catgtaaagtgtcaggtattgagtagagatacccaaagcccaagagagga
gctgtatgcattgaaagtgacagagctgaataggtgggcttttctaagtc
ctttggaacaaaaattccatgaggagcttcagatactggtcattggaccc
acaagatttggaatgtgccctgatggaattggggtttatttttatctaat
tgtataataggatctaaaaccttggtagaccccaagcccttaatacaact
gatgccataaaagaggcaacatttttatgtcaaaacccagcacaccttcc
aaaatgggaacaaagaccaactctatagtttcaggatctgggagggtacc
cagatgcactaacctcattttttttttgacttcgtagttttgtttttgct
aattgttcttcttaaccaaagagtgtccaccagatgtgattttgtgcata
aagttaaagagtgggagcctggggctactggtggcaataaaactttctga
tgtcaataagagaaaaagaagaaaaaatgtgaaggaaggtaatgactggc
aaagtgtat
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81019858_81020930
seq2: B6Ng01-061B10.g_68_1126

seq1  GAATTCACTTTTGCACCTGCGTACAACGCTTCTTTACTAGTTAGGCACAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACTTTTGCACCTGCGTACAACGCTTCTTTACTAGTTAGGCACAG  50

seq1  TGGAGGCCCGCGCCATCTTATAATGGGGATTGCTTGCGGCACACACGGCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGGCCCGCGCCATCTTATAATGGGGATTGCTTGCGGCACACACGGCT  100

seq1  CTCCTCAGAGATTACTGGCGGCACACATGCGATTGCTCGCAGCACGTACC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCTCAGAGATTACTGGCGGCACACATGCGATTGCTCGCAGCACGTACC  150

seq1  GGCTCTCCACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTCTCCACAGATAGATAGATAGATAGATAGATAGATAGATAGATAGAT  200

seq1  AGATAGATAAGACAGATGGACAGAGAGAGAAAGGGCAAGAGAAAAATGAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATAGATAAGACAGATGGACAGAGAGAGAAAGGGCAAGAGAAAAATGAT  250

seq1  TTAAAAAGAAGAGGTCATGAATTTGAGAGAAAATGTTGAGAGACAGGAGA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAAAAGAAGAGGTCATGAATTTGAGAGAAAATGTTGAGAGACAGGAGA  300

seq1  AATTGGATAAAGGAGATTGGAAATAATATGAATACAGCAAACATGTAAAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTGGATAAAGGAGATTGGAAATAATATGAATACAGCAAACATGTAAAA  350

seq1  ATTCATAAAAACAAAGTTAATTTAAAAATCTCTAAGTATTTTGGAAATCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCATAAAAACAAAGTTAATTTAAAAATCTCTAAGTATTTTGGAAATCT  400

seq1  TTTTATGTTCAGGCAATGAGTGAGACCACTTCATCAGGTAATTATCTTTA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTTCAGGCAATGAGTGAGACCACTTCATCAGGTAATTATCTTTA  450

seq1  AAAATAAGTCATTGCCATTGGAGACTCCAGGGCACTGGAGATGCTATGAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATAAGTCATTGCCATTGGAGACTCCAGGGCACTGGAGATGCTATGAC  500

seq1  CATGTAAAGTGTCAGGTATTGAGTAGAGATACCCAAAGCCCAAGAGAGGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATGTAAAGTGTCAGGTATTGAGTAGAGATACCCAAAGCCCAAGAGAGGA  550

seq1  GCTGTATGCATTGAAAGTGACAGAGCTGAATAGGTGGGCTTTTCTAAGTC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTATGCATTGAAAGTGACAGAGCTGAATAGGTGGGCTTTTCTAAGTC  600

seq1  CTTTGGAACAAAAATTCCATGAGGAGCTTCAGATACTGGTCATTGGACCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGGAACAAAAATTCCATGAGGAGCTTCAGATACTGGTCATTGGACCC  650

seq1  ACAAGATTTGGAATGTGCCCTGATGGAATTGGGGTTTATTTTTATCTAAT  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGATTTGGAATGTGCCCTGATGGAATTGGGGTTTATTTTTATCTAAT  700

seq1  TGTATAATAGGATCTAAAACCTTGGTAGACCCCAAGCCCTTAATACAACT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATAATAGGATCTAAAACCTTGGTAGACCCCAAGCCCTTAATACAACT  750

seq1  GATGCCATAAAAGAGGCAACATTTTTATGTCAAAACCCAGCACACCTTCC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGCCATAAAAGAGGCAACATTTTTATGTCAAAACCCAGCACACCTTCC  800

seq1  AAAATGGGAACAAAGACCAACTCTATAGTTCCAGGATCTGGGAGGGTACC  850
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AAAATGGGAACAAAGACCAACTCTATAGTTTCAGGATCTGGGAGGGTACC  850

seq1  CAGATGCACTAACCTCATTTTTTTTTTGACTTCGGTAGTTTTGTTTTTTG  900
      ||||||||||||||||||||||||||||||||| ||||||||| ||||||
seq2  CAGATGCACTAACCTCATTTTTTTTTTGACTTC-GTAGTTTTG-TTTTTG  898

seq1  CTAATTGTTCTTCTTAACCAAAGAGTGTCCACCAGGATGTGAATTTTGTG  950
      |||||||||||||||||||||||||||||||||| |||||| ||||||||
seq2  CTAATTGTTCTTCTTAACCAAAGAGTGTCCACCA-GATGTG-ATTTTGTG  946

seq1  CATAAAAGTTAAAGAGTGGGGAGGCTTGGGGCTACT-GTGGCAAATAAAA  999
      ||| ||||||||||||||||   || |||||||||| |||||||   |||
seq2  CAT-AAAGTTAAAGAGTGGG--AGCCTGGGGCTACTGGTGGCAA--TAAA  991

seq1  ACTTTCTGATGTCAATAAGAAGAAAAAAGAAAGAAAAAATGTGAAAGGAA  1049
      ||||||||||||||||||| |||||||   |||||||||||||||  | |
seq2  ACTTTCTGATGTCAATAAG-AGAAAAA--GAAGAAAAAATGTGAA--GGA  1036

seq1  AAGTAATTGACTGCAAAAGTGTAT  1073
      | |||| ||||||  |||||||||
seq2  AGGTAA-TGACTGGCAAAGTGTAT  1059