BAC Information

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BAC

Clone NameB6Ng01-064D16
Chromosome16 (Build37)
Map Location 26,173,433 - 26,350,993
singlet/doubletdoublet
Overlap genenone
Upstream gene5430420C16Rik, Trp63, LOC100043571, Leprel1
Downstream geneCldn1, Cldn16, LOC100043057, Il1rap, Gm606, Ostn
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-064D16.bB6Ng01-064D16.g
ACCDH884077DH884078
length458697
definitionDH884077|Mus musculus domesticus DNA, BAC clone: B6Ng01-064D16, 5' end.DH884078|Mus musculus domesticus DNA, BAC clone: B6Ng01-064D16, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(26,350,530 - 26,350,993)(26,173,433 - 26,174,130)
sequence
tgtgaatatgggctttttcctggtcccagtcttagtattgaagaggaatg
agtatatcaggcaagattcttaaagctttatctggcaggcacgaaaacta
aagcacacttaagagtgtttagaatttagtcctgcacataattgaaaacc
tcaggtttctaatatattgcatcatttgctctcatcctcagactcttcag
tactccttaggagaaaagcaccaagtgtatgcagcaaaagtctgtatgag
agtgaccttagatcttataactgaagctccatcatgcctgtatggggtct
cccaggctttctgtgtattatgtattagaagatgatttaaagaatccagg
ttcttccttaccttcagagatgacctcatttgagtctgttcctatttttg
ctttgttttgttttgttttgagtaggcctttccctctccctctccctctc
cctctccc
gaattccacagagctatgactttggtgtaaagtatcaaagggcaataatc
tgcaataagatgaactgcctattgagttgatacattaagtgcaagctcct
tctgattcataaggccccggagcatgcagctcaccctctcattagcttat
ttcccctgcagtcacaatatatcagctaatgtgcgttattagcttcgttt
caaacatgcccttcgtgttcacagttttctttcttctttctttctttaca
ctccagattttattaccctttcttcccatccacactctgactgattcaca
tcccttaattccttcccagcccacccaactgtctccacgaagatgtctcc
aacccccacccccacctgacctctaaactccctgggacctccagtctctt
gagggttaggttcatcatccctgattgaactcagaccctgcagtcctctg
ctgtatgtgtgttggaggcatcatatcagctggtgtatgctgcctgtttg
gtggtccagtgtttgagagatcttgggggtccaggttaattgagactgct
ggtccttctacagggtctccctcctcttcagctctttcagcctttcccta
attcagccagcagtttctatccattggtttgggtgcaaatacctgctcca
gactctttcagctgtttattcattcggtcttccagagtgccatcatg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_26350530_26350993
seq2: B6Ng01-064D16.b_44_507 (reverse)

seq1  GGGAGAGGGAGAGGGAGAGGGAGAGGGAAAGGCCTACTCAAAACAAAACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGAGAGGGAGAGGGAGAGGGAGAGGGAAAGGCCTACTCAAAACAAAACA  50

seq1  AAACAAAGCAAAAATAGGAACAGACTCAAATGAGGTCATCTCTGAAGGTA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACAAAGCAAAAATAGGAACAGACTCAAATGAGGTCATCTCTGAAGGTA  100

seq1  AGGAAGAACCTGGATTCTTTAAATCATCTTCTAATACATAATACACAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAAGAACCTGGATTCTTTAAATCATCTTCTAATACATAATACACAGAA  150

seq1  AGCCTGGGAGACCCCATACAGGCATGATGGAGCTTCAGTTATAAGATCTA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCCTGGGAGACCCCATACAGGCATGATGGAGCTTCAGTTATAAGATCTA  200

seq1  AGGTCACTCTCATACAGACTTTTGCTGCATACACTTGGTGCTTTTCTCCT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTCACTCTCATACAGACTTTTGCTGCATACACTTGGTGCTTTTCTCCT  250

seq1  AAGGAGTACTGAAGAGTCTGAGGATGAGAGCAAATGATGCAATATATTAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGAGTACTGAAGAGTCTGAGGATGAGAGCAAATGATGCAATATATTAG  300

seq1  AAACCTGAGGTTTTCAATTATGTGCAGGACTAAATTCTAAACACTCTTAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCTGAGGTTTTCAATTATGTGCAGGACTAAATTCTAAACACTCTTAA  350

seq1  GTGTGCTTTAGTTTTCGTGCCTGCCAGATAAAGCTTTAAGAATCTTGCCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGTGCTTTAGTTTTCGTGCCTGCCAGATAAAGCTTTAAGAATCTTGCCT  400

seq1  GATATACTCATTCCTCTTCAATACTAAGACTGGGACCAGGAAAAAGCCCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATACTCATTCCTCTTCAATACTAAGACTGGGACCAGGAAAAAGCCCA  450

seq1  TATTCACAGAATTC  464
      ||||||||||||||
seq2  TATTCACAGAATTC  464

seq1: chr16_26173433_26174130
seq2: B6Ng01-064D16.g_70_766

seq1  GAATTCCACAGAGCTATGACTTTGGTGTAAAGTATCAAAGGGCAATAATC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCACAGAGCTATGACTTTGGTGTAAAGTATCAAAGGGCAATAATC  50

seq1  TGCAATAAGATGAACTGCCTATTGAGTTGATACATTAAGTGCAAGCTCCT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAATAAGATGAACTGCCTATTGAGTTGATACATTAAGTGCAAGCTCCT  100

seq1  TCTGATTCATAAGGCCCCGGAGCATGCAGCTCACCCTCTCATTAGCTTAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGATTCATAAGGCCCCGGAGCATGCAGCTCACCCTCTCATTAGCTTAT  150

seq1  TTCCCCTGCAGTCACAATATATCAGCTAATGTGCGTTATTAGCTTCGTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCTGCAGTCACAATATATCAGCTAATGTGCGTTATTAGCTTCGTTT  200

seq1  CAAACATGCCCTTCGTGTTCACAGTTTTCTTTCTTCTTTCTTTCTTTACA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAACATGCCCTTCGTGTTCACAGTTTTCTTTCTTCTTTCTTTCTTTACA  250

seq1  CTCCAGATTTTATTACCCTTTCTTCCCATCCACACTCTGACTGATTCACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGATTTTATTACCCTTTCTTCCCATCCACACTCTGACTGATTCACA  300

seq1  TCCCTTAATTCCTTCCCAGCCCACCCAACTGTCTCCACGAAGATGTCTCC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTTAATTCCTTCCCAGCCCACCCAACTGTCTCCACGAAGATGTCTCC  350

seq1  AACCCCCACCCCCACCTGACCTCTAAACTCCCTGGGACCTCCAGTCTCTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCCCACCCCCACCTGACCTCTAAACTCCCTGGGACCTCCAGTCTCTT  400

seq1  GAGGGTTAGGTTCATCATCCCTGATTGAACTCAGACCCTGCAGTCCTCTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGGTTAGGTTCATCATCCCTGATTGAACTCAGACCCTGCAGTCCTCTG  450

seq1  CTGTATGTGTGTTGGAGGCATCATATCAGCTGGTGTATGCTGCCTGTTTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTATGTGTGTTGGAGGCATCATATCAGCTGGTGTATGCTGCCTGTTTG  500

seq1  GTGGTCCAGTGTTTGAGAGATCTTGGGGGTCCAGGTTAATTGAGACTGCT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTCCAGTGTTTGAGAGATCTTGGGGGTCCAGGTTAATTGAGACTGCT  550

seq1  GGTCCTTCTACAGGGTCTCCCTCCTCTTCAGCTCTTTTCAGCCTTTCCCT  600
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  GGTCCTTCTACAGGGTCTCCCTCCTCTTCAGCTC-TTTCAGCCTTTCCCT  599

seq1  AATTCAGCCAGCAGTTTCTATCCATTGGTTTGGGTGCAAATACCTGCTCC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGCCAGCAGTTTCTATCCATTGGTTTGGGTGCAAATACCTGCTCC  649

seq1  AGACTCTTTCAGCTGTTTATTCATTCGGTCTTCCAGAGTGCCATCATG  698
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTCTTTCAGCTGTTTATTCATTCGGTCTTCCAGAGTGCCATCATG  697