BAC Information

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BAC

Clone NameB6Ng01-068D16
Chromosome16 (Build37)
Map Location 86,882,579 - 86,883,667
singlet/doubletsinglet
Overlap genenone
Upstream geneAdamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294, ORF5, LOC100040088, Usp16, Cct8, B130034C11Rik, LOC435486, ORF63, Bach1, LOC100039901
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-068D16.bB6Ng01-068D16.g
ACCDH886880DH886881
length1,2741,083
definitionDH886880|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D16, 5' end.DH886881|Mus musculus domesticus DNA, BAC clone: B6Ng01-068D16, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgtttagcactgtaccccatttttaataaggttatttgaatt
tctggagttcagcttcttgagctccttgtatatattggatattgtcccct
atcagatttaggattagttaaaaattctttcccaatctgttggtgacctt
tttgtcttattgacaatatcttttgccctacagaagcgttgcaattttgt
gaggtcccatttgtcgattcttaatcttactgcacaagccattgctgttc
tgtttaagtatttttcccctgtgctcatatcttcgagggttttccccact
ttctcctctataattttcagtgtctctggttttatgtggagttctttgat
ccacttagacttgagctttgtacaattagataagaatggatcaattctaa
ttcttctaaatgataattgccagttgtgccagcaccatttttgaaaatgt
tgtcttttttccactggatggatttagctcccttgtcatagattaagtga
ccataggtgtgtgggttcatttctgggtcttcaattctattccattgatc
tacttgtctgtcactataccagtaccatgccgtttttatcacaattgctc
tgtagtacagcttgagatcaggcatgttgattcccccagaggttctttta
ttgttgagaatagtttttcctatcctaggttttttgttattccagatgaa
tttgcagattgcactttctaactcagtgaaagaattggtgtgtaattttg
atggggattgcattgaatctgtagattgctttcggcaggacagccatttt
tactatattaatcctgccaatccatgagcatgggagatctttccattttc
tgagatcttcaatttctttcttcagagacttgaagttcttgtcatacaga
tctttcacttcttagttagagtcacaccaagatcttttatattattgtga
ctattgtgaaggtgttgtttccctaatacatttctcatcctgtttatctt
tgtgcagaagaaaggcactgatttgttggagttgattttatattgcagct
acttttgctgaagttatcagttaagagttccctggtgaattttaaggtca
ctgaattataaatcatatcatctgaaacaggaaaatttgactcttctttc
aattgatcctgaatcctttgtggcaatgctgctggactaagacaaattga
aagatgtaagggcgctctcgatctcttaggtattctcgatttctccttac
ttgtgagagtgtgctacgatggct
gaattctctttgatgtacttggcgttttgaggatgctgaaagttcatgct
gggttggcagattagcactgggtcactcctgtgctctttctaatattcat
gattgttcttacattgcgtagattttgagaatagctaagtactaaggtca
tcttttggatatttatgtacaatagtgaaatcctctcagcaacttggcct
gatatttaacagtcataatgctgagaattcttttgatgtaatgtaatgaa
ttaaaggattttgaaagtgttgatggctttaagattttttttctaaattc
aagcaccccaagttttgaagcattgactgactatattggattaatacact
aagacttagagaaaaatgttatggctctaacatttgaaaattccatgtag
tttctagtgataaagtgttattctcttgccttcatctgttgctttctctg
acttccaatttttgctcgaaactttaaaagtatcatctcagagtaaaagt
ccgaggggagcaggttaagtcatgcacaccctggcagcttcaagaatgtc
atgcgttctgggtttaacagctgcttcgtgagacccacagcctaaagttc
tccctcctacattctactgcaaaagcctgaaggctagtttcagaacattt
ctgaattcctcactccaactagcatgctacagaaactgagggactctttt
cggacacaagatggcagtagcacaccgttcacattgatcatttcctcaga
gggattgtagtcacacaaatcagttattttgtggtaagttaaaagtcccc
ctgaaagaggagggaaaaggcccttttaagattatgactagtaccgtaac
caccttttccctacaaccccaactgtcatatctatacattttctgatgta
gtccttcaatgactttcaagaacagattaatttcaaaaagttcaggagtc
ttcgtatcaagaaagaaatgcctagaaagcaggtcaacattatgaagatg
ccctgcatcatagccttgagctaatactggttctcacataaagaggttga
gagcctataatgagttcacttgattacacatcc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86882579_86883667
seq2: B6Ng01-068D16.g_69_1143 (reverse)

seq1  AATCAAGTTGAACATCAATAAATAGCCTCTCAAACCTACTTTATTGTGAG  50
      ||||||| ||||| ||| |  |||| ||||| ||||| ||||| ||||||
seq2  AATCAAG-TGAAC-TCATT--ATAGGCTCTC-AACCT-CTTTA-TGTGAG  43

seq1  AACACAGTATGTAGTCTCAAGGCTATTGATGCAGGGCATCTTCATAATGG  100
      ||| |||||| ||| |||||||||| |||||||||||||||||||||| |
seq2  AAC-CAGTAT-TAG-CTCAAGGCTA-TGATGCAGGGCATCTTCATAAT-G  88

seq1  TTGACCTTGCTTTCTTAGGCATTTCTTTCCTTGATACGGAGACTCCTGAA  150
      |||||| ||||||| ||||||||||||| ||||||||| |||||||||||
seq2  TTGACC-TGCTTTC-TAGGCATTTCTTT-CTTGATACGAAGACTCCTGAA  135

seq1  CTTTTTGTATTTCATTCTGTTCTTGAAAGTCATTGAAGGACTACATCAG-  199
      ||||||| | || | |||||||||||||||||||||||||||||||||| 
seq2  CTTTTTGAAATT-AATCTGTTCTTGAAAGTCATTGAAGGACTACATCAGA  184

seq1  AAATGTATAGATATGACAGTTGGGGTTGTAGGGAAAAGGTGGTTACGGTA  249
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTATAGATATGACAGTTGGGGTTGTAGGGAAAAGGTGGTTACGGTA  234

seq1  CTAGTCATAATCTT-AAAGGGCCTTTTCCCTCCTCTTTCAGGGGGACTTT  298
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  CTAGTCATAATCTTAAAAGGGCCTTTTCCCTCCTCTTTCAGGGGGACTTT  284

seq1  TAACTTACCACAAAATAACTGATTTGTGTGACTACAATCCCTCTGAGGAA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACTTACCACAAAATAACTGATTTGTGTGACTACAATCCCTCTGAGGAA  334

seq1  ATGATCAATGTGAACGGTGTGCTACTGCCATCTTGTGTCCGAAAAGAGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGATCAATGTGAACGGTGTGCTACTGCCATCTTGTGTCCGAAAAGAGTC  384

seq1  CCTCAGTTTCTGTAGCATGCTAGTTGGAGTGAGGAATTCAGAAATGTTCT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCAGTTTCTGTAGCATGCTAGTTGGAGTGAGGAATTCAGAAATGTTCT  434

seq1  GAAACTAGCCTTCAGGCTTTTGCAGTAGAATGTAGGAGGGAGAACTTTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAACTAGCCTTCAGGCTTTTGCAGTAGAATGTAGGAGGGAGAACTTTAG  484

seq1  GCTGTGGGTCTCACGAAGCAGCTGTTAAACCCAGAACGCATGACATTCTT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGTGGGTCTCACGAAGCAGCTGTTAAACCCAGAACGCATGACATTCTT  534

seq1  GAAGCTGCCAGGGTGTGCATGACTTAACCTGCTCCCCTCGGACTTTTACT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCTGCCAGGGTGTGCATGACTTAACCTGCTCCCCTCGGACTTTTACT  584

seq1  CTGAGATGATACTTTTAAAGTTTCGAGCAAAAATTGGAAGTCAGAGAAAG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGATGATACTTTTAAAGTTTCGAGCAAAAATTGGAAGTCAGAGAAAG  634

seq1  CAACAGATGAAGGCAAGAGAATAACACTTTATCACTAGAAACTACATGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAGATGAAGGCAAGAGAATAACACTTTATCACTAGAAACTACATGGA  684

seq1  ATTTTCAAATGTTAGAGCCATAACATTTTTCTCTAAGTCTTAGTGTATTA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTCAAATGTTAGAGCCATAACATTTTTCTCTAAGTCTTAGTGTATTA  734

seq1  ATCCAATATAGTCAGTCAATGCTTCAAAACTTGGGGTGCTTGAATTTAGA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCAATATAGTCAGTCAATGCTTCAAAACTTGGGGTGCTTGAATTTAGA  784

seq1  AAAAAAATCTTAAAGCCATCAACACTTTCAAAATCCTTTAATTCATTACA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAATCTTAAAGCCATCAACACTTTCAAAATCCTTTAATTCATTACA  834

seq1  TTACATCAAAAGAATTCTCAGCATTATGACTGTTAAATATCAGGCCAAGT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACATCAAAAGAATTCTCAGCATTATGACTGTTAAATATCAGGCCAAGT  884

seq1  TGCTGAGAGGATTTCACTATTGTACATAAATATCCAAAAGATGACCTTAG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTGAGAGGATTTCACTATTGTACATAAATATCCAAAAGATGACCTTAG  934

seq1  TACTTAGCTATTCTCAAAATCTACGCAATGTAAGAACAATCATGAATATT  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTTAGCTATTCTCAAAATCTACGCAATGTAAGAACAATCATGAATATT  984

seq1  AGAAAGAGCACAGGAGTGACCCAGTGCTAATCTGCCAACCCAGCATGAAC  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAGCACAGGAGTGACCCAGTGCTAATCTGCCAACCCAGCATGAAC  1034

seq1  TTTCAGCATCCTCAAAACGCCAAGTACATCAAAGAGAATTC  1089
      |||||||||||||||||||||||||||||||||||||||||
seq2  TTTCAGCATCCTCAAAACGCCAAGTACATCAAAGAGAATTC  1075