BAC Information

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BAC

Clone NameB6Ng01-071M21
Chromosome16 (Build37)
Map Location 65,021,369 - 65,022,517
singlet/doubletsinglet
Overlap geneHtr1f
Upstream geneCkt2, 4930453N24Rik, Zfp654, LOC433036, Cggbp1, LOC668242, LOC100043815, LOC677448, LOC668247
Downstream geneLOC672931, Pou1f1, Chmp2b, EG383186, Vgll3, LOC664846
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-071M21.bB6Ng01-071M21.g
ACCDH889398DH889399
length1,145206
definitionDH889398|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M21, 5' end.DH889399|Mus musculus domesticus DNA, BAC clone: B6Ng01-071M21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctcaaacaaggaatatagaatggctgagaagcacttaaagaaatg
ttcaacatccttagtcaacagagaaatgcaaatcaaaacaaccccaagat
tctacctcacaccagttagaatgactaagatcaaaaactcaggtgacagc
agatgctggtgaggatgtggagaaagaggaacacttctccattgttggtg
ggattgcactctggaaatcagtttggatgttcctcagaaaattggacttt
gtactacctgaggacccagctataccactcctggccataaatgaacttca
ttctccagagtttgacacaacccgtatttgctatgcctcacttaaataat
agaaaaattaaccttgtcgtctagtgtcacctgtacatttatatatatta
ggcatctttatacttattaactgataaaataaattaaaaactttggttat
tctttttaatctagataagagaatgttaaactccactatatatttctact
ttaagttgtaataagaacaagctacctaaaatattattaatgctaaaatt
attattcaaattaatcacatgattcacaattcttagcaaagttttatgtg
ataaatttgaacattttgaagttatttttctaagcagtcacttttgaaag
attgcatcttcaaggattacatttttattgaaaattaaatattcatattc
tttcttttattgttatttttggagttttggtctggaatctattggctttc
tgatgaggcatcaatataggacatggcataaatattcacaattttgattg
ctggatgagaacacacagtgtgaaatatttacttccatcctctaccctga
ggaccagacctggaatctgaatgtgaattgagtctatctcagcacaaacc
ctcatctgtttgtattcatcagatacagcggatgtgggtggaatgaatgt
tcagtggtgcttgcctgggtaaagacgtgagggggaggagaagtccagtg
gggggagaagcaccctgttttgctaggaactgcctggcgttttgcaaaca
taaggtgtcaatctctctgtaggctggatcacaaagcaattgccagactg
ttcaagaatgtaacctgtgtacaaagatggcaattcctctcctga
attgtttattaaaaataccttagatgtaggcaagagggtttgtgggtgtg
gggagggggaaagatgtcactcccacattgtgtgcactcatgtggatgcc
atatgatagcctctggcattgttcctcatgagttatccagcttaagtttg
cagtcagacttgctcattggtctttagctcactgaatagcctattatgct
tgccag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_65021369_65022517
seq2: B6Ng01-071M21.b_46_1190

seq1  GAATTCTCAAACAAGGAATATAGAATGGCTGAGAAGCACTTAAAGAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCAAACAAGGAATATAGAATGGCTGAGAAGCACTTAAAGAAATG  50

seq1  TTCAACATCCTTAGTCAACAGAGAAATGCAAATCAAAACAACCCCAAGAT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAACATCCTTAGTCAACAGAGAAATGCAAATCAAAACAACCCCAAGAT  100

seq1  TCTACCTCACACCAGTTAGAATGACTAAGATCAAAAACTCAGGTGACAGC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTACCTCACACCAGTTAGAATGACTAAGATCAAAAACTCAGGTGACAGC  150

seq1  AGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGCTGGTGAGGATGTGGAGAAAGAGGAACACTTCTCCATTGTTGGTG  200

seq1  GGATTGCACTCTGGAAATCAGTTTGGATGTTCCTCAGAAAATTGGACTTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATTGCACTCTGGAAATCAGTTTGGATGTTCCTCAGAAAATTGGACTTT  250

seq1  GTACTACCTGAGGACCCAGCTATACCACTCCTGGCCATAAATGAACTTCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACTACCTGAGGACCCAGCTATACCACTCCTGGCCATAAATGAACTTCA  300

seq1  TTCTCCAGAGTTTGACACAACCCGTATTTGCTATGCCTCACTTAAATAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCAGAGTTTGACACAACCCGTATTTGCTATGCCTCACTTAAATAAT  350

seq1  AGAAAAATTAACCTTGTCGTCTAGTGTCACCTGTACATTTATATATATTA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAAATTAACCTTGTCGTCTAGTGTCACCTGTACATTTATATATATTA  400

seq1  GGCATCTTTATACTTATTAACTGATAAAATAAATTAAAAACTTTGGTTAT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATCTTTATACTTATTAACTGATAAAATAAATTAAAAACTTTGGTTAT  450

seq1  TCTTTTTAATCTAGATAAGAGAATGTTAAACTCCACTATATATTTCTACT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTTTAATCTAGATAAGAGAATGTTAAACTCCACTATATATTTCTACT  500

seq1  TTAAGTTGTAATAAGAACAAGCTACCTAAAATATTATTAATGCTAAAATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTTGTAATAAGAACAAGCTACCTAAAATATTATTAATGCTAAAATT  550

seq1  ATTATTCAAATTAATCACATGATTCACAATTCTTAGCAAAGTTTTATGTG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTCAAATTAATCACATGATTCACAATTCTTAGCAAAGTTTTATGTG  600

seq1  ATAAATTTGAACATTTTGAAGTTATTTTTCTAAGCAGTCACTTTTGAAAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAATTTGAACATTTTGAAGTTATTTTTCTAAGCAGTCACTTTTGAAAG  650

seq1  ATTGCATCTTCAAGGATTACATTTTTATTGAAAATTAAATATTCATATTC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGCATCTTCAAGGATTACATTTTTATTGAAAATTAAATATTCATATTC  700

seq1  TTTCTTTTATTGTTATTTTTGGAGTTTTGGTCTGGAATCTATTGGCTTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTTATTGTTATTTTTGGAGTTTTGGTCTGGAATCTATTGGCTTTC  750

seq1  TGATGAGGCATCAATATAGGACATGGCATAAATATTCACAATTTTGATTG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATGAGGCATCAATATAGGACATGGCATAAATATTCACAATTTTGATTG  800

seq1  CTGGATGAGAACACACAGTGTGAAATATTTACTTCCATCCTCTACCCTGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGATGAGAACACACAGTGTGAAATATTTACTTCCATCCTCTACCCTGA  850

seq1  GGACCAGACCTGGAATCTGAATGTGAATTGAGTCTATCTCAGGCACAAAC  900
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GGACCAGACCTGGAATCTGAATGTGAATTGAGTCTATCTCA-GCACAAAC  899

seq1  CCTCATCTGTTTGTATTCATCAGGATACAGCGGATGTGGGTGGAATGAAT  950
      |||||||||||||||||||||| |||||||||||||||||||||||||||
seq2  CCTCATCTGTTTGTATTCATCA-GATACAGCGGATGTGGGTGGAATGAAT  948

seq1  GTTCAGTGGTGCTTGCCTGGGTAAAGACGTGAGGGGGAGGAGGAAGTCCA  1000
      ||||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  GTTCAGTGGTGCTTGCCTGGGTAAAGACGTGAGGGGGAGGA-GAAGTCCA  997

seq1  GTGGGGGAGGAGGCACCCTGCTCTGCTAGGAACTGCCT-GCGTTTTGCCA  1049
      |||||||  || |||||||| | ||||||||||||||| |||||||| ||
seq2  GTGGGGGGAGAAGCACCCTGTTTTGCTAGGAACTGCCTGGCGTTTTG-CA  1046

seq1  GACTATAGGTGTC-ATCTCCTCTGTATGCTGGATCACAAGCCATATGCCA  1098
       ||   ||||||| |||| ||||||| ||||||||||||  ||  |||||
seq2  AACATAAGGTGTCAATCT-CTCTGTAGGCTGGATCACAAAGCAATTGCCA  1095

seq1  GACTGTTCCAGGATGTACCCTGTGTACAAAGATGGCAAATTCCTCTCCTG  1148
      |||||||| || ||||| |||||||||||||||||| |||||||||||||
seq2  GACTGTTCAAGAATGTAACCTGTGTACAAAGATGGC-AATTCCTCTCCTG  1144

seq1  A  1149
      |
seq2  A  1145