BAC Information

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BAC

Clone NameB6Ng01-072I01
Chromosome16 (Build37)
Map Location 30,982,317 - 31,138,485
singlet/doubletdoublet
Overlap geneAI480653, Centb2
Upstream geneLOC100043102, 9030404E10Rik, Hes1, EG547263, 1700025H01Rik, LOC100043110, Cpn2, Lrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122
Downstream genePpp1r2, Apod, 1700007E05Rik, Bdh1, Gm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-072I01.bB6Ng01-072I01.g
ACCDH889904DH889905
length244986
definitionDH889904|Mus musculus domesticus DNA, BAC clone: B6Ng01-072I01, 5' end.DH889905|Mus musculus domesticus DNA, BAC clone: B6Ng01-072I01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,138,242 - 31,138,485)(30,982,317 - 30,983,301)
sequence
ttggatcattttagtttttggcaaaagtagctgttttagagaataacagg
tgacaagcacccaaagtgtaaagcatttcagctaccgtacatgtttgaat
ttacccttctccttgagtttgaatttttatttttttaaatttccaaatag
agaggaaaaacccagaaggaaagcattagcccaggtctgagcagtgtctc
cctacaacctgtgcgagtgggggtgggggtggtgcagggagggg
gaattctctagcacctgatatgcatttatctcccaaagcctatgtgttac
acacccatgtcagaagcaagaaatgtgtgtgttagttaccatgccggaag
aactttgcatgctccataatgaagatgagaactagacacaagtttcaatg
agctcaaatgtcacagatccttaagacagagcggcatagaacctccgatc
tgtcactacccaagctatagatctgtatcttgactacacattcttgacta
cacacctggcccagaggcttcttctcaccctaggaatgctgggaaagaaa
gagaaaagacacagcaggtgatctgcggacaaacaactcaagcagcagat
agtcttaggaaaggatgcagagattcactggagtcaggcaactggaaatc
tacagagcaatgaggtgttactgcccacacatcaggccagcacaaccaga
caatgacagccgagctcgagtgggcaggaaagaggtggttgtatagactg
ctaatataaaggaaaattattatggtctatgggatgaacaatctggaaac
acctatcaaaattataaatctacctacccttcagctcaatattctatgga
atctacccctgggaaataaaaacagtaattcacaaagacacacaagcaca
tttataaataatggcattacttatacattaaataaaaaaccagaagcaaa
gtgaatgcccacggaaataagaatgactgaataaaatatagactacctta
ctatagaataaataagaatgaaatatgaggtgtgcctgctcactccggag
atgtttcatgaagtatcgatgagccagcaaggcaactctcagggacagtg
agtgattaatgtgactccagctgagttactttaaaggagcttgcacgagt
gcgttgtgtgtttttaaatgattggctgtagatggtaaataatccttata
atgagttatgtggatgggaagaagagataggggctt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_31138242_31138485
seq2: B6Ng01-072I01.b_48_291 (reverse)

seq1  CCCCTCCCTGCACCACCCCCACCCCCACTCGCACAGGTTGTAGGGAGACA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCTCCCTGCACCACCCCCACCCCCACTCGCACAGGTTGTAGGGAGACA  50

seq1  CTGCTCAGACCTGGGCTAATGCTTTCCTTCTGGGTTTTTCCTCTCTATTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTCAGACCTGGGCTAATGCTTTCCTTCTGGGTTTTTCCTCTCTATTT  100

seq1  GGAAATTTAAAAAAATAAAAATTCAAACTCAAGGAGAAGGGTAAATTCAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAATTTAAAAAAATAAAAATTCAAACTCAAGGAGAAGGGTAAATTCAA  150

seq1  ACATGTACGGTAGCTGAAATGCTTTACACTTTGGGTGCTTGTCACCTGTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATGTACGGTAGCTGAAATGCTTTACACTTTGGGTGCTTGTCACCTGTT  200

seq1  ATTCTCTAAAACAGCTACTTTTGCCAAAAACTAAAATGATCCAA  244
      ||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCTCTAAAACAGCTACTTTTGCCAAAAACTAAAATGATCCAA  244

seq1: chr16_30982317_30983301
seq2: B6Ng01-072I01.g_67_1052

seq1  GAATTCTCTAGCACCTGATATGCATTTATCTCCCAAAGCCTATGTGTTAC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTAGCACCTGATATGCATTTATCTCCCAAAGCCTATGTGTTAC  50

seq1  ACACCCATGTCAGAAGCAAGAAATGTGTGTGTTAGTTACCATGCCGGAAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCCATGTCAGAAGCAAGAAATGTGTGTGTTAGTTACCATGCCGGAAG  100

seq1  AACTTTGCATGCTCCATAATGAAGATGAGAACTAGACACAAGTTTCAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTTTGCATGCTCCATAATGAAGATGAGAACTAGACACAAGTTTCAATG  150

seq1  AGCTCAAATGTCACAGATCCTTAAGACAGAGCGGCATAGAACCTCCGATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTCAAATGTCACAGATCCTTAAGACAGAGCGGCATAGAACCTCCGATC  200

seq1  TGTCACTACCCAAGCTATAGATCTGTATCTTGACTACACATTCTTGACTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCACTACCCAAGCTATAGATCTGTATCTTGACTACACATTCTTGACTA  250

seq1  CACACCTGGCCCAGAGGCTTCTTCTCACCCTAGGAATGCTGGGAAAGAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACCTGGCCCAGAGGCTTCTTCTCACCCTAGGAATGCTGGGAAAGAAA  300

seq1  GAGAAAAGACACAGCAGGTGATCTGCGGACAAACAACTCAAGCAGCAGAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAAAAGACACAGCAGGTGATCTGCGGACAAACAACTCAAGCAGCAGAT  350

seq1  AGTCTTAGGAAAGGATGCAGAGATTCACTGGAGTCAGGCAACTGGAAATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAGGAAAGGATGCAGAGATTCACTGGAGTCAGGCAACTGGAAATC  400

seq1  TACAGAGCAATGAGGTGTTACTGCCCACACATCAGGCCAGCACAACCAGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGAGCAATGAGGTGTTACTGCCCACACATCAGGCCAGCACAACCAGA  450

seq1  CAATGACAGCCGAGCTCGAGTGGGCAGGAAAGAGGTGGTTGTATAGACTG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATGACAGCCGAGCTCGAGTGGGCAGGAAAGAGGTGGTTGTATAGACTG  500

seq1  CTAATATAAAGGAAAATTATTATGGTCTATGGGATGAACAATCTGGAAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATATAAAGGAAAATTATTATGGTCTATGGGATGAACAATCTGGAAAC  550

seq1  ACCTATCAAAATTATAAATCTACCTACCCTTCAGCTCAATATTCTATGGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTATCAAAATTATAAATCTACCTACCCTTCAGCTCAATATTCTATGGA  600

seq1  ATCTACCCCTGGGAAATAAAAACAGTAATTCACAAAGACACACAAGCACA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTACCCCTGGGAAATAAAAACAGTAATTCACAAAGACACACAAGCACA  650

seq1  TTTATAAATAATGGCATTACTTATACATTAAATAAAAAACCAGAAGCAAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAATAATGGCATTACTTATACATTAAATAAAAAACCAGAAGCAAA  700

seq1  GTGAATGCCCACGGAAATAAGAATGACTGAATAAAATATAGACTACCTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATGCCCACGGAAATAAGAATGACTGAATAAAATATAGACTACCTTA  750

seq1  CTATAGAATAAATAAGAATGAAATATGAGGTGTGCCTGCTCACTCCGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAGAATAAATAAGAATGAAATATGAGGTGTGCCTGCTCACTCCGGAG  800

seq1  ATGTTTCATGAAGTATCGATGAGCCAGCAAGGCAACTCTCAGGGACAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTCATGAAGTATCGATGAGCCAGCAAGGCAACTCTCAGGGACAGTG  850

seq1  AGTGATTAATGTGACTCCAGCTGAGTTACTTTAAAGGAGCTTGCACGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATTAATGTGACTCCAGCTGAGTTACTTTAAAGGAGCTTGCACGAGT  900

seq1  GCGTTGTGTGTTTTTAAATGATTGGCTGTAGATGGTAAATAATTCTTATA  950
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  GCGTTGTGTGTTTTTAAATGATTGGCTGTAGATGGTAAATAATCCTTATA  950

seq1  ATGAGTTATGTGGATGGGAAGAAGGGA-AGGGGCTT  985
      |||||||||||||||||||||||| || ||||||||
seq2  ATGAGTTATGTGGATGGGAAGAAGAGATAGGGGCTT  986