BAC Information

Click to search

BAC

Clone NameB6Ng01-076D08
Chromosome16 (Build37)
Map Location 3,263,029 - 3,264,002
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100042177, LOC100042915, LOC100042188
Downstream geneLOC100042251, LOC100042925, LOC100042270, LOC100042937, LOC100042283, Olfr161, Olfr162-ps1, Olfr163-ps1, LOC100042949, Mefv, EG620395, Zfp263, Olfr15, Zfp174, Zfp597, 1200013P24Rik, 1700037C18Rik, Cluap1, LOC664851, Nlrc3, Btbd12, Dnase1, Trap1, Crebbp, EG436332
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-076D08.bB6Ng01-076D08.g
ACCDH892542DH892543
length1,115970
definitionDH892542|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D08, 5' end.DH892543|Mus musculus domesticus DNA, BAC clone: B6Ng01-076D08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctaacctatccctcatgtggggataaacccacgtggcataaggcc
tttacaggtctggcaaatggattttactcatatctcttcctttggaagac
ttcagtatctacatgtttctattgatacatgctctggcatcatgtttgct
acacctctaacaggagaaaaggcctcgcatgcaattcaacattgcctcga
ggcatggagtgcttggggaaaacccaaactccttaagacagacaatggac
cagtttatacttctcaaaaatttcaacggttctgtcgccagatggatgtg
actcatctcactggtcttccatataatcctcaagggcagggcattgtaga
acgtgcccatcccactctcaagtcctacttaattaaacaaaaagggggaa
tctaccctcagtaccaagagtagttgtttccatagcactcttcactctta
attttttaaatcttgatgcccaaggccatactgtggccgaacgtcactgt
tcagagcctgacaggccaaaagagatggtaaaatggaaagatgttttgac
tggtctctggaaaggcccagatcctattttaataagatccaggggagctg
tttgtgttttcccgcaggaagaagacaacccattctggctgctggaacga
ctgacacgaagaattctgtcacctgaaaatgactccaggatggatccatt
gggaaactacctctagccctcgtgctacctctgtggaattgggttcctag
tatattgggagagtacagatgggcaattttgtctgccttcccaaagccca
tgcctgtccgtcatgatgcagttgttttccccaaattctttacaaccaat
aaaagtttggatctgccatacataccatatgatcctaccttggacactgc
tgggagagaatcgttctctacctgacagggttccctttgctttcaatttg
accaaagaggagactgcattccactcatgaaccgagcctggggtggtttt
atgggaaacgtacagaatgggtgaatattcaacaggagaatgtaggggtg
aatatggacagattttatacactttttgcagagcaatctgggattaatgg
acccttccttgaccc
gaattcttttgattgttgaatctgcactaaggtagtgtctgagaccagct
ttcctgacgggcccccgacagagcatgtcaggaaccatgacagataacag
cagtgttcacagcaatatggcacctgccagagggaagcaaataataaggt
ctaaaaatgccaattttgacataagaagaaatctgtaatttttcacaagg
taaaaactctgcctcaccatggatttttggaaaacgaagttgaagaatat
ggactgatttgtccttgaaactgattccagctttgtcagctttggaaaca
cagataattttgagaacccttttctgttttgttttgtttggtttggtttt
gaccactacactctggagagagaacaacacattgtagaaaggtagtttac
ttttgaatcaactactaatgtcaattctgttgagaagtaacctttgcaaa
cgaattttcaaacaactcataaaggtatgtcatggcaatcccaagccaga
cattctaaagtgaagtacaggatgttttgaattttcatatatcatataaa
agagtttcatcatgctatggatgttttagcctgacccgcccagcaggtcc
agttattcgagggtctcgagaggaccttctcctaagaaccaaaatggagg
gaggaagagacgagaaccaaatgcaatgaacaatacacggaagcagtctg
attagcatcaaggtctcactgtattcagcaaggctcaaggcttaaatgca
caagcaaaggaggaagtacttctcagcacgaggtttggggcattggaaat
ttttcttttggagactacacggagaagcagaatttggtggtatcaggtac
atcttgtggtaaagacatccggtgctgacttagggctggaaaaatctgtg
catgtctcggagcagtacgtcgtggcctgcttttgacccccttttctctc
aggggtggggggggagagag
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_3263029_3264002
seq2: B6Ng01-076D08.g_69_1038

seq1  GAATTCTTCTGATTGTTGAATCTGCACTAAGGTAGTGTCTGAGACCAGCT  50
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTGATTGTTGAATCTGCACTAAGGTAGTGTCTGAGACCAGCT  50

seq1  TTCCTGACGGGCCCCCGACAGAGCATGTCAGGAACCATGACAGATAACAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGACGGGCCCCCGACAGAGCATGTCAGGAACCATGACAGATAACAG  100

seq1  CAGTGTTCACAGCAATATGGCACCTGCCAGAGGGAAGCAAATAATAAGGT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTGTTCACAGCAATATGGCACCTGCCAGAGGGAAGCAAATAATAAGGT  150

seq1  CTAAAAATGCCAATTTTGACATAAGAAGAAATCTGTAATTTTTCACAAGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAAAATGCCAATTTTGACATAAGAAGAAATCTGTAATTTTTCACAAGG  200

seq1  TAAAAACTCTGCCTCACCATGGATTTTTGGAAAACGAAGTTGAAGAATAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAAACTCTGCCTCACCATGGATTTTTGGAAAACGAAGTTGAAGAATAT  250

seq1  GGACTGATTTGTCCTTGAAACTGATTCCAGCTTTGTCAGCTTTGGAAACA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGACTGATTTGTCCTTGAAACTGATTCCAGCTTTGTCAGCTTTGGAAACA  300

seq1  CAGATAATTTTGAGAACCCTTTTCTGTTTTGTTTTGTTTGGTTTGGTTTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGATAATTTTGAGAACCCTTTTCTGTTTTGTTTTGTTTGGTTTGGTTTT  350

seq1  GACCACTACACTCTGGAGAGAGAACAACACATTGTAGAAAGGTAGTTTAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCACTACACTCTGGAGAGAGAACAACACATTGTAGAAAGGTAGTTTAC  400

seq1  TTTTGAATCAACTACTAATGTCAATTCTGTTGAGAAGTAACCTTTGCAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGAATCAACTACTAATGTCAATTCTGTTGAGAAGTAACCTTTGCAAA  450

seq1  CGAATTTTCAAACAACTCATAAAGGTATGTCATGGCAATCCCAAGCCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATTTTCAAACAACTCATAAAGGTATGTCATGGCAATCCCAAGCCAGA  500

seq1  CATTCTAAAGTGAAGTACAGGATGTTTTGAATTTTCATATATCATATAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTAAAGTGAAGTACAGGATGTTTTGAATTTTCATATATCATATAAA  550

seq1  AGAGTTTCATCATGCTATGGATGTTTTAGCCTGACCCGCCCAGCAGGTCC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTTTCATCATGCTATGGATGTTTTAGCCTGACCCGCCCAGCAGGTCC  600

seq1  AGTTATTCGAGGGTCTCGAGAGGACCTTCTCCTAAGAACC-AAATGGAGG  649
      |||||||||||||||||||||||||||||||||||||||| |||||||||
seq2  AGTTATTCGAGGGTCTCGAGAGGACCTTCTCCTAAGAACCAAAATGGAGG  650

seq1  GAGGAAGAGACGAGAACCAAATGCAATGAACAATACACGGAAGCAGTCTG  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGAAGAGACGAGAACCAAATGCAATGAACAATACACGGAAGCAGTCTG  700

seq1  ATTAGCATCAAGGTCTCACTGTATTCAGCAAGGCTCAAGGCTTAAATGCA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTAGCATCAAGGTCTCACTGTATTCAGCAAGGCTCAAGGCTTAAATGCA  750

seq1  CAAGCAAAGGAGGAAGTACTTCTCAGCAGGAGGTTTGGGGCATTGGAAAT  799
      |||||||||||||||||||||||||||| |||||||||||||||||||||
seq2  CAAGCAAAGGAGGAAGTACTTCTCAGCACGAGGTTTGGGGCATTGGAAAT  800

seq1  TTTTCTTTTGGAGACTACACGGAGAAGCAGGAATTTGGTGGTATCAGGGT  849
      ||||||||||||||||||||||||||||| |||||||||||||||| |||
seq2  TTTTCTTTTGGAGACTACACGGAGAAGCA-GAATTTGGTGGTATCA-GGT  848

seq1  ACATCTTGTGGTAAGGACATCCGGTGCTGACTTAGGGCTGGAAAAATCTG  899
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  ACATCTTGTGGTAAAGACATCCGGTGCTGACTTAGGGCTGGAAAAATCTG  898

seq1  TGCATGTTCTCGGAGCAGTACGTCGGTGGCCTGCTTTTGACCCCCTTTTC  949
      |||||| ||||||||||||||||| |||||||||||||||||||||||||
seq2  TGCATG-TCTCGGAGCAGTACGTC-GTGGCCTGCTTTTGACCCCCTTTTC  946

seq1  TTCTCAGGGGGTGGGGGGGAGAGAG  974
       |||||||||  |||||||||||||
seq2  -TCTCAGGGGTGGGGGGGGAGAGAG  970