BAC Information

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BAC

Clone NameB6Ng01-081F08
Chromosome16 (Build37)
Map Location 74,820,690 - 74,898,485
singlet/doubletdoublet
Overlap genenone
Upstream geneRobo2
Downstream geneLOC665042, D930038D03Rik, Rbm11, Stch, LOC546667, Samsn1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081F08.bB6Ng01-081F08.g
ACCDH896218DH896219
length1,154336
definitionDH896218|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F08, 5' end.DH896219|Mus musculus domesticus DNA, BAC clone: B6Ng01-081F08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(74,897,318 - 74,898,485)(74,820,690 - 74,821,025)
sequence
gaattctttttcttttctttttttttgtattacatattttctttatttac
atttcaaatgttatcccctttcctagtttcccctccggaaaccccctatc
cctttccccctccccctgatcaccaaaccatccactcctgcttcctggcc
atagcagtcccctctactggggcatagaaccctcacaggaccaagggcca
atccttccactgatgaccaactaggccatcctctgctacatatgcagcta
gagccatgagtcactccgtgtggtttctttggttggtggtttagtcccag
ggagctttggagatacatcttatatattcccaagtcatggaagactgctt
gtacttagaaaccctgtattaaagtgataggtagccatcctgagaggcac
tgacaatgttaaacagaaaatgctggattgcaggaaaaagatgggaagca
ttggatgactgattgtaatgaagacacttatactaagggggaaaaatcag
gcaaattgcaagagaaatgtaatcagagttggagttgtttaccaccaaga
ggaagaaagctgggaaaactgattctgcctgcacatgaaagtatgtgtgt
gctgacaatgaatctgctacatgtttgtgcctgtgtgtttgtgtgaatgt
gagagcaggttatcttcacatgacggagatacagctcagagaaatcaaga
gactattgtaaaatcctgtccatatttgaattcttgctaataaaatttaa
ttttaaaagacaaaatatatggagaggattttaaacccaggagggattta
actcacgaggtagaggcaagggggatctctgagttcaaggccaaactgct
ctaagggtgagttacaggaacagccagggatatataaagaaaccctgact
aggaaagaaaatacataatgggcgttcagagtgtcacaaagatgatttga
gagccttaagatttcagtagaaaactttctatttcgtttgacttagaatc
agtggaaaactgagctacatatgtagaaaataagtatgtggaggactcta
tatctgaacatatacttagagtagttgatatgattattgaccactggagc
aatattagtgtcaagatgatctttattgattaaatgtgcattcgcactcg
gatc
tttccagtgaatggctgcaatggagttgttcctgaccaggacagatgaaa
tgttgctcatagagtgtcatggatgtcacagggcaaacagcttcagagaa
actgggcagagttggttataaagcagtgaactatcagagagcagacatca
agaaccagtactgaatcttccccctctataaagcttttgtagtttttatc
atagctgaactttaaatatatcctgagatctaggtactaagtatgatcac
agatcttatcctaagaaagaggaaaggttagattggggtaaagcattgag
gtgaatttgtaggtatttggtgtgtgtgtgtgtgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_74897318_74898485
seq2: B6Ng01-081F08.b_46_1199 (reverse)

seq1  GATCCGATGTGCGAATGCACATTTATATCATTAAAGAATCATCTATGACA  50
      ||||||| ||||||||||||||||| |||| ||||| ||||||| |||||
seq2  GATCCGA-GTGCGAATGCACATTTA-ATCAATAAAG-ATCATCT-TGACA  46

seq1  CTTAATATGTGCTCCCTGTGGTCAATAATCATATC-ACTACTCCTAAGTA  99
      | |||||| |||| || |||||||||||||||||| |||||| |||||||
seq2  C-TAATAT-TGCT-CCAGTGGTCAATAATCATATCAACTACT-CTAAGTA  92

seq1  TATGTTTCCAGATATAGAGTCCTCCACATACTTTATTTTTCTAACATATG  149
      ||||||  |||||||||||||||||||||||||   |||||| |||||||
seq2  TATGTT--CAGATATAGAGTCCTCCACATACTT--ATTTTCT-ACATATG  137

seq1  TAGCTCCAGTTTTCCACTGATTCTAAGTCAAACGAAATAGAAAGTTTTCT  199
      ||||| ||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCT-CAGTTTTCCACTGATTCTAAGTCAAACGAAATAGAAAGTTTTCT  186

seq1  ACTGAAATCTTAAGGCTCTCAAATCATTCTTTGTGACACTCTGAACGCCC  249
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  ACTGAAATCTTAAGGCTCTCAAATCA-TCTTTGTGACACTCTGAACGCCC  235

seq1  ATTATGTATTTTCTTTCCTAGTCAGGGTTTCTTTATATATCCCTGGCTGT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATGTATTTTCTTTCCTAGTCAGGGTTTCTTTATATATCCCTGGCTGT  285

seq1  TCCTGTAACTCACCCTTAGAGCAGTTTGGCCTTGAACTCAGAGATCCCCC  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTAACTCACCCTTAGAGCAGTTTGGCCTTGAACTCAGAGATCCCCC  335

seq1  TTGCCTCTACCTCCTGAGTTAAATCCCTCCTGGGTTTAAAATCCTCTCCA  399
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  TTGCCTCTACCTCGTGAGTTAAATCCCTCCTGGGTTTAAAATCCTCTCCA  385

seq1  TATATTTTGTCTTTTAAAATTAAATTTTATTAGCAAGAATTCAAATATGG  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATTTTGTCTTTTAAAATTAAATTTTATTAGCAAGAATTCAAATATGG  435

seq1  ACAGGATTTTACAATAGTCTCTTGATTTCTCTGAGCTGTATCTCCGTCAT  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGGATTTTACAATAGTCTCTTGATTTCTCTGAGCTGTATCTCCGTCAT  485

seq1  GTGAAGATAACCTGCTCTCACATTCACACAAACACACAGGCACAAACATG  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGATAACCTGCTCTCACATTCACACAAACACACAGGCACAAACATG  535

seq1  TAGCAGATTCATTGTCAGCACACACATACTTTCATGTGCAGGCAGAATCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCAGATTCATTGTCAGCACACACATACTTTCATGTGCAGGCAGAATCA  585

seq1  GTTTTCCCAGCTTTCTTCCTCTTGGTGGTAAACAACTCCAACTCTGATTA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTCCCAGCTTTCTTCCTCTTGGTGGTAAACAACTCCAACTCTGATTA  635

seq1  CATTTCTCTTGCAATTTGCCTGATTTTTCCCCCTTAGTATAAGTGTCTTC  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTCTCTTGCAATTTGCCTGATTTTTCCCCCTTAGTATAAGTGTCTTC  685

seq1  ATTACAATCAGTCATCCAATGCTTCCCATCTTTTTCCTGCAATCCAGCAT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTACAATCAGTCATCCAATGCTTCCCATCTTTTTCCTGCAATCCAGCAT  735

seq1  TTTCTGTTTAACATTGTCAGTGCCTCTCAGGATGGCTACCTATCACTTTA  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTGTTTAACATTGTCAGTGCCTCTCAGGATGGCTACCTATCACTTTA  785

seq1  ATACAGGGTTTCTAAGTACAAGCAGTCTTCCATGACTTGGGAATATATAA  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATACAGGGTTTCTAAGTACAAGCAGTCTTCCATGACTTGGGAATATATAA  835

seq1  GATGTATCTCCAAAGCTCCCTGGGACTAAACCACCAACCAAAGAAACCAC  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGTATCTCCAAAGCTCCCTGGGACTAAACCACCAACCAAAGAAACCAC  885

seq1  ACGGAGTGACTCATGGCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGGAGTGACTCATGGCTCTAGCTGCATATGTAGCAGAGGATGGCCTAGT  935

seq1  TGGTCATCAGTGGAAGGATTGGCCCTTGGTCCTGTGAGGGTTCTATGCCC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCATCAGTGGAAGGATTGGCCCTTGGTCCTGTGAGGGTTCTATGCCC  985

seq1  CAGTAGAGGGGACTGCTATGGCCAGGAAGCAGGAGTGGATGGTTTGGTGA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTAGAGGGGACTGCTATGGCCAGGAAGCAGGAGTGGATGGTTTGGTGA  1035

seq1  TCAGGGGGAGGGGGAAAGGGATAGGGGGTTTCCGGAGGGGAAACTAGGAA  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGGGGAGGGGGAAAGGGATAGGGGGTTTCCGGAGGGGAAACTAGGAA  1085

seq1  AGGGGATAACATTTGAAATGTAAATAAAGAAAATATGTAATACAAAAAAA  1149
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGGATAACATTTGAAATGTAAATAAAGAAAATATGTAATACAAAAAAA  1135

seq1  AAGAAAAGAAAAAGAATTC  1168
      |||||||||||||||||||
seq2  AAGAAAAGAAAAAGAATTC  1154

seq1: chr16_74820690_74821025
seq2: B6Ng01-081F08.g_76_411

seq1  TTTCCAGTGAATGGCTGCAATGGAGTTGTTCCTGACCAGGACAGATGAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCCAGTGAATGGCTGCAATGGAGTTGTTCCTGACCAGGACAGATGAAA  50

seq1  TGTTGCTCATAGAGTGTCATGGATGTCACAGGGCAAACAGCTTCAGAGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCATAGAGTGTCATGGATGTCACAGGGCAAACAGCTTCAGAGAA  100

seq1  ACTGGGCAGAGTTGGTTATAAAGCAGTGAACTATCAGAGAGCAGACATCA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGCAGAGTTGGTTATAAAGCAGTGAACTATCAGAGAGCAGACATCA  150

seq1  AGAACCAGTACTGAATCTTCCCCCTCTATAAAGCTTTTGTAGTTTTTATC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAACCAGTACTGAATCTTCCCCCTCTATAAAGCTTTTGTAGTTTTTATC  200

seq1  ATAGCTGAACTTTAAATATATCCTGAGATCTAGGTACTAAGTATGATCAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGCTGAACTTTAAATATATCCTGAGATCTAGGTACTAAGTATGATCAC  250

seq1  AGATCTTATCCTAAGAAAGAGGAAAGGTTAGATTGGGGTAAAGCATTGAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATCTTATCCTAAGAAAGAGGAAAGGTTAGATTGGGGTAAAGCATTGAG  300

seq1  GTGAATTTGTAGGTATTTGGTGTGTGTGTGTGTGTG  336
      ||||||||||||||||||||||||||||||||||||
seq2  GTGAATTTGTAGGTATTTGGTGTGTGTGTGTGTGTG  336