BAC Information

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BAC

Clone NameB6Ng01-081G22
Chromosome16 (Build37)
Map Location 37,963,339 - 38,074,072
singlet/doubletdoublet
Overlap geneGpr156
Upstream geneFbxo40, LOC100043252, Polq, Stxbp5l, Gtf2e1, Rabl3, Hgd, Ndufb4, LOC100043709, Fstl1, LOC100043264, Lrrc58, LOC100043271
Downstream geneLOC100043713, Gsk3b, Nr1i2, 4932425I24Rik, Cox17, LOC100043715, Popdc2, Pla1a, Adprh, Cd80, LOC667353, Ck-ps3, 4930455C21Rik, 9630046K23Rik, Tmem39a, Cdgap, B4galt4, LOC100043289, Upk1b, 4930435E12Rik, Igsf11
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-081G22.bB6Ng01-081G22.g
ACCDH896288DH896289
length6841,118
definitionDH896288|Mus musculus domesticus DNA, BAC clone: B6Ng01-081G22, 5' end.DH896289|Mus musculus domesticus DNA, BAC clone: B6Ng01-081G22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(37,963,339 - 37,964,022)(38,072,947 - 38,074,072)
sequence
gaattcacacatgactaactgtatgtgtcctaatgtgactgtatttggag
acagcatttttaaagttaaatgaagttaaactgggtcacagcactagtcc
cttaaggctgttgtgcaaagagcaaagatcgcagaagcacctgcagctcc
agaaaaccgcctgcaaggactccacagacaagcagctgtcttcgagccaa
gaaggggtgcttccctacaaaacagccttgcctgagacgtgatcctgggc
ttccaacctcctggattgtgagaaaaaatcatcaactctgtggcgttttg
tcaggacagtaagcgtaggatagtgtggcagatactcgaaaggattcagc
tgcctttcctctgaccaaatcaacatatcaagatttagtcaaacgtttcc
tgtttcctttgcttttggaaatgtaaccgaatatccacgtttgattggag
tactaactagatttgaaaacagtctgacattaatccaatcctgatccctc
cccgtgcctcccttcttcccatgaggcttggggcttacttttatctgtaa
aataaattacttcaccagatagtaaacatattttcaagcattttgaattt
tgcagctctcaatggcaatggcaagtgactctcctccctcccccacccac
actgtgtgtgtgtgtgtgtgtgtgtgtgtgttgt
gaattccagaattccagttggtcagtgtgcatgctatgccagctattagc
ctattttgggtggcacctttgtctccagacaatgcctacctaacttgcag
atttatactccaagaagcttcatagactcagactgaagatcatcaaaaac
agaaataaaataggtattaaaaatctcccgttatatagcagaacatatac
aaaaaggagacactgagacttagcttcacttgtgcagaaaatatgacatt
atttctgctgtgtcagaggctccaggaaacacaaacattttgattccttg
agggcaaagtgttacacataaatatgcctagcagaaggttatggtgacct
agcttaatgatgccagttctgtgatgggtgccagagacaacaggaacctt
agcaacagatagtcagagggcaaaataagacttgtttggttttctctttt
taattaatatttattagtatggtacagtatgatatttgaaacatattagc
cagacggtggtggcgcacacctttaataccagcacttgggaggtagaggc
agggagctttctgaattcgaggccagcctggtctacaaagtgagttccag
gacagccacggctacacagagaaaccctgtctcaaaacaaacaaacaaac
aaacaaacaaaaacaaaacaaaacaaaaccaccaccaccaacaacaaaaa
acgtacttagtgtaatatgcaaagataaaatcaggctaattacaatttcc
attctctctagttattgttttgtggtgaaaaactttaaatttttttcttg
ttatttagaaatgtaaattaattattataagctgtagcttctgcctggtg
ctacttaacattagaactgtgtgttagttacccttctatactgtgataaa
caccataactgagacgactttagaagaaagggtttattggggcttacagt
tccagggacttagagcctatcactatcaagatgaagacccatgtcaccat
caagcatgggtgtcctgggcagcagctggaaccacaagcccaagaagaaa
gaaacaaacttgaatgaattgagtctttagtcttaaagcctggcccaatg
acatttgctctccagaca
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_37963339_37964022
seq2: B6Ng01-081G22.b_45_728

seq1  GAATTCACACATGACTAACTGTATGTGTCCTAATGTGACTGTATTTGGAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCACACATGACTAACTGTATGTGTCCTAATGTGACTGTATTTGGAG  50

seq1  ACAGCATTTTTAAAGTTAAATGAAGTTAAACTGGGTCACAGCACTAGTCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCATTTTTAAAGTTAAATGAAGTTAAACTGGGTCACAGCACTAGTCC  100

seq1  CTTAAGGCTGTTGTGCAAAGAGCAAAGATCGCAGAAGCACCTGCAGCTCC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTAAGGCTGTTGTGCAAAGAGCAAAGATCGCAGAAGCACCTGCAGCTCC  150

seq1  AGAAAACCGCCTGCAAGGACTCCACAGACAAGCAGCTGTCTTCGAGCCAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAACCGCCTGCAAGGACTCCACAGACAAGCAGCTGTCTTCGAGCCAA  200

seq1  GAAGGGGTGCTTCCCTACAAAACAGCCTTGCCTGAGACGTGATCCTGGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGGTGCTTCCCTACAAAACAGCCTTGCCTGAGACGTGATCCTGGGC  250

seq1  TTCCAACCTCCTGGATTGTGAGAAAAAATCATCAACTCTGTGGCGTTTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAACCTCCTGGATTGTGAGAAAAAATCATCAACTCTGTGGCGTTTTG  300

seq1  TCAGGACAGTAAGCGTAGGATAGTGTGGCAGATACTCGAAAGGATTCAGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGACAGTAAGCGTAGGATAGTGTGGCAGATACTCGAAAGGATTCAGC  350

seq1  TGCCTTTCCTCTGACCAAATCAACATATCAAGATTTAGTCAAACGTTTCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTTTCCTCTGACCAAATCAACATATCAAGATTTAGTCAAACGTTTCC  400

seq1  TGTTTCCTTTGCTTTTGGAAATGTAACCGAATATCCACGTTTGATTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTTCCTTTGCTTTTGGAAATGTAACCGAATATCCACGTTTGATTGGAG  450

seq1  TACTAACTAGATTTGAAAACAGTCTGACATTAATCCAATCCTGATCCCTC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTAACTAGATTTGAAAACAGTCTGACATTAATCCAATCCTGATCCCTC  500

seq1  CCCGTGCCTCCCTTCTTCCCATGAGGCTTGGGGCTTACTTTTATCTGTAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCGTGCCTCCCTTCTTCCCATGAGGCTTGGGGCTTACTTTTATCTGTAA  550

seq1  AATAAATTACTTCACCAGATAGTAAACATATTTTCAAGCATTTTGAATTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAAATTACTTCACCAGATAGTAAACATATTTTCAAGCATTTTGAATTT  600

seq1  TGCAGCTCTCAATGGCAATGGCAAGTGACTCTCCTCCCTCCCCCACCCAC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGCTCTCAATGGCAATGGCAAGTGACTCTCCTCCCTCCCCCACCCAC  650

seq1  ACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGT  684
      ||||||||||||||||||||||||||||||||||
seq2  ACTGTGTGTGTGTGTGTGTGTGTGTGTGTGTTGT  684

seq1: chr16_38072947_38074072
seq2: B6Ng01-081G22.g_70_1187 (reverse)

seq1  TGTCTGGAGGACATATGTCACTTGGGGCAGGCTTTAAGAACTTAAAGACT  50
      |||||||||  || |||||| ||||| ||||||||||||   ||||||||
seq2  TGTCTGGAGAGCAAATGTCA-TTGGGCCAGGCTTTAAGA--CTAAAGACT  47

seq1  CATATCATTTCAGTTTG-TTCTTTCTTCTTTGTGCTTGTGGTTTCAGCTT  99
      ||  |||||  |||||| |||||||||| ||| |||||||||| |||| |
seq2  CAATTCATTCAAGTTTGTTTCTTTCTTC-TTGGGCTTGTGGTTCCAGC-T  95

seq1  GCTGCTCCAGACA-CCATGCTTGCTTGCTGACATGCGTCTCCATCTTGAT  148
      ||||| |  |||| |||||||||  || ||||||| |||| |||||||||
seq2  GCTGCCCAGGACACCCATGCTTG-ATGGTGACATGGGTCTTCATCTTGAT  144

seq1  AGTGATAGGCTCTAAGTCCCTGGAACTGTAAGCCCCAATAAACCCTTTCT  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGATAGGCTCTAAGTCCCTGGAACTGTAAGCCCCAATAAACCCTTTCT  194

seq1  TCTAAAAGTCGTCTCAGTTATGGTGTTTTATCACAGTAATAGAAGGGTAA  248
      ||| ||||||||||||||||||||| ||||||||||| ||||||||||||
seq2  TCT-AAAGTCGTCTCAGTTATGGTG-TTTATCACAGT-ATAGAAGGGTAA  241

seq1  CTAACACACAGTTCTAATGTTAAGTAGCACCAGGCAGAAGCTACAGCTTA  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACACAGTTCTAATGTTAAGTAGCACCAGGCAGAAGCTACAGCTTA  291

seq1  TAATAATTAATTTTACATTTCTAAATAACAAGAAAAAAATTTAAAGTTTT  348
      |||||||||| |||||||||||||||||||||||||||||||||||||||
seq2  TAATAATTAA-TTTACATTTCTAAATAACAAGAAAAAAATTTAAAGTTTT  340

seq1  TCACCACAAAACAATAACTAGAGAGAATGGAAATTGTAATTAGCCTGATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACCACAAAACAATAACTAGAGAGAATGGAAATTGTAATTAGCCTGATT  390

seq1  TTATCTTTGCATATTACACTAAGTACGTTTTTTGTTGTTGGTGGTGGTGG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATCTTTGCATATTACACTAAGTACGTTTTTTGTTGTTGGTGGTGGTGG  440

seq1  TTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGAGAC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTTTGTTTTGTTTTTGTTTGTTTGTTTGTTTGTTTGTTTTGAGAC  490

seq1  AGGGTTTCTCTGTGTAGCCGTGGCTGTCCTGGAACTCACTTTGTAGACCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGTTTCTCTGTGTAGCCGTGGCTGTCCTGGAACTCACTTTGTAGACCA  540

seq1  GGCTGGCCTCGAATTCAGAAAGCTCCCTGCCTCTACCTCCCAAGTGCTGG  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGGCCTCGAATTCAGAAAGCTCCCTGCCTCTACCTCCCAAGTGCTGG  590

seq1  TATTAAAGGTGTGCGCCACCACCGTCTGGCTAATATGTTTCAAATATCAT  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTAAAGGTGTGCGCCACCACCGTCTGGCTAATATGTTTCAAATATCAT  640

seq1  ACTGTACCATACTAATAAATATTAATTAAAAAGAGAAAACCAAACAAGTC  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTACCATACTAATAAATATTAATTAAAAAGAGAAAACCAAACAAGTC  690

seq1  TTATTTTGCCCTCTGACTATCTGTTGCTAAGGTTCCTGTTGTCTCTGGCA  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTATTTTGCCCTCTGACTATCTGTTGCTAAGGTTCCTGTTGTCTCTGGCA  740

seq1  CCCATCACAGAACTGGCATCATTAAGCTAGGTCACCATAACCTTCTGCTA  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCATCACAGAACTGGCATCATTAAGCTAGGTCACCATAACCTTCTGCTA  790

seq1  GGCATATTTATGTGTAACACTTTGCCCTCAAGGAATCAAAATGTTTGTGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCATATTTATGTGTAACACTTTGCCCTCAAGGAATCAAAATGTTTGTGT  840

seq1  TTCCTGGAGCCTCTGACACAGCAGAAATAATGTCATATTTTCTGCACAAG  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGGAGCCTCTGACACAGCAGAAATAATGTCATATTTTCTGCACAAG  890

seq1  TGAAGCTAAGTCTCAGTGTCTCCTTTTTGTATATGTTCTGCTATATAACG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGCTAAGTCTCAGTGTCTCCTTTTTGTATATGTTCTGCTATATAACG  940

seq1  GGAGATTTTTAATACCTATTTTATTTCTGTTTTTGATGATCTTCAGTCTG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGATTTTTAATACCTATTTTATTTCTGTTTTTGATGATCTTCAGTCTG  990

seq1  AGTCTATGAAGCTTCTTGGAGTATAAATCTGCAAGTTAGGTAGGCATTGT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTATGAAGCTTCTTGGAGTATAAATCTGCAAGTTAGGTAGGCATTGT  1040

seq1  CTGGAGACAAAGGTGCCACCCAAAATAGGCTAATAGCTGGCATAGCATGC  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGAGACAAAGGTGCCACCCAAAATAGGCTAATAGCTGGCATAGCATGC  1090

seq1  ACACTGACCAACTGGAATTCTGGAATTC  1126
      ||||||||||||||||||||||||||||
seq2  ACACTGACCAACTGGAATTCTGGAATTC  1118