BAC Information

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BAC

Clone NameB6Ng01-086N17
Chromosome16 (Build37)
Map Location 86,381,849 - 86,383,011
singlet/doubletsinglet
Overlap genenone
Upstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-086N17.bB6Ng01-086N17.g
ACCDH900144DH900145
length1,1651,030
definitionDH900144|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N17, 5' end.DH900145|Mus musculus domesticus DNA, BAC clone: B6Ng01-086N17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaggaacttaactcagctcatcagtcttttaattttaatttttt
actggttattttatttatttacatttcaaatgttattccatgagtcttaa
gtagagattgcttttgttggctgaggcatcatgcttgtcctttcctggag
atctagaatgtaagaataatctgagaaattaacacaaatgtggcatcata
tattattaaaacacagttcacatttttcttattatgagtcaataatattt
aaaagtcctggatacatagaaacatactctgtgtgataatttacataaaa
agtaatatccaaaaattgtaagagaagtttttcctaatttttacagccat
aacgttagggctaaaacatgtaaacaatgctatttcactaggatgactga
tgcctagtgtatttaccgataacagattactgcatggcaaataaagttaa
agtaatagaatgactattatattttatccgtggattatgtaggtagcaga
tgtgggaacagtatattgtcagtgatacaggaattcacagataaaaccaa
aaagagttccaaattaaagggattgaacctcataattacctagagttgtt
tttaaatacatcttgggcaaaactgtactgggaagattccaaggccaggc
ttggatggaactgtccactgtacctccaacactacagcgattgatctagg
gctaggccgctgggaagcttgagtctatgactctgaattaaacagtttat
ctctctgatgtgatatgaatgtttgtgttccatcaaagtgcatattctga
agtcttaatcatctagatagtggcatgaagagatgcgggctgactgggag
gttgatgaggttttacggatggaattctcaggaataaactttctttcagt
ttacttctgttatctttgatattataattatatcactctattccttccct
ccctctgacctctcccatgcacccttctttgctcctcctgctcatgtgat
ctttccaaatatataagcgcgatctgctcagtccttatattttacttgca
tcttataatattttcaggatgactattttatattgggatgaccagttggg
tggggggtttccaggagaatttcgaattcttctaacacagtaagcgttct
tcagcaatgttagct
gaattcttagccttgagacctagttactgtccagccacatgcatcatcat
gaatatttaagaatctcttgtatgaatttggtgtaaagaatgctccataa
ttatctctgattggttaataaaaggttgagaagccaatgactggttggag
gaaatagaaaggaaggaactctgatcccagtcactggttcaagggagaat
attcaggagaaggagttggtcaagaggcagggaaaggtacaggagaagag
gggtaggtggaagaagaatgaggagaaggaggaggaggttgccatgaggt
caggcattagcagatgttgccgagggagttcaccatgagtacacacatgg
agcacaccaagccaatgagagacaaaatacaagtgactcagctatacagc
tgtatagaagcttgatcgcataggagtttgggtatagctgctcagttatt
gtgattaaaagcttgttgaataaatgtatagggctgttctcaattgtatg
ggtgaataatggctgtaagaactcaagtaatatagagcatgcaatataaa
cattaaaaatcaagcaagcccttttctttttctatgctccagacataatt
gttttctctcatatgtggatatgaaaagtttttttatgtaccatttctcc
tagatttctaatactttccgaccctggcattctcctacactggggcatta
agccttcatgggaccaagggcctctccttcccacacataaccaacaaggc
caccctctgcttcatatgcagctggagcccatgagtcccaccatgtgtat
tccaatatctatctatattatctatatctatatctgtatcaatctatatc
tatctatctagtatgtatgtgatgtctttgacactagtgacttgtcatca
gttgtagtgggcaagcaagagcagcagaaatggcctgtgcttgtcttgcc
gaatcttctggaacacctgaatccgaagaatccctgggaagctccacttt
atcatctcttatgtgctgtagaagaaggct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86381849_86383011
seq2: B6Ng01-086N17.b_49_1213

seq1  GAATTCCAGGAACTTAACTCAGCTCATCAGTCTTTTAATTTTAATTTTTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCAGGAACTTAACTCAGCTCATCAGTCTTTTAATTTTAATTTTTT  50

seq1  ACTGGTTATTTTATTTATTTACATTTCAAATGTTATTCCATGAGTCTTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGTTATTTTATTTATTTACATTTCAAATGTTATTCCATGAGTCTTAA  100

seq1  GTAGAGATTGCTTTTGTTGGCTGAGGCATCATGCTTGTCCTTTCCTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGAGATTGCTTTTGTTGGCTGAGGCATCATGCTTGTCCTTTCCTGGAG  150

seq1  ATCTAGAATGTAAGAATAATCTGAGAAATTAACACAAATGTGGCATCATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCTAGAATGTAAGAATAATCTGAGAAATTAACACAAATGTGGCATCATA  200

seq1  TATTATTAAAACACAGTTCACATTTTTCTTATTATGAGTCAATAATATTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTATTAAAACACAGTTCACATTTTTCTTATTATGAGTCAATAATATTT  250

seq1  AAAAGTCCTGGATACATAGAAACATACTCTGTGTGATAATTTACATAAAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGTCCTGGATACATAGAAACATACTCTGTGTGATAATTTACATAAAA  300

seq1  AGTAATATCCAAAAATTGTAAGAGAAGTTTTTCCTAATTTTTACAGCCAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATATCCAAAAATTGTAAGAGAAGTTTTTCCTAATTTTTACAGCCAT  350

seq1  AACGTTAGGGCTAAAACATGTAAACAATGCTATTTCACTAGGATGACTGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGTTAGGGCTAAAACATGTAAACAATGCTATTTCACTAGGATGACTGA  400

seq1  TGCCTAGTGTATTTACCGATAACAGATTACTGCATGGCAAATAAAGTTAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTAGTGTATTTACCGATAACAGATTACTGCATGGCAAATAAAGTTAA  450

seq1  AGTAATAGAATGACTATTATATTTTATCCGTGGATTATGTAGGTAGCAGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTAATAGAATGACTATTATATTTTATCCGTGGATTATGTAGGTAGCAGA  500

seq1  TGTGGGAACAGTATATTGTCAGTGATACAGGAATTCACAGATAAAACCAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTGGGAACAGTATATTGTCAGTGATACAGGAATTCACAGATAAAACCAA  550

seq1  AAAGAGTTCCAAATTAAAGGGATTGAACCTCATAATTACCTAGAGTTGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGAGTTCCAAATTAAAGGGATTGAACCTCATAATTACCTAGAGTTGTT  600

seq1  TTTAAATACATCTTGGGCAAAACTGTACTGGGAAGATTCCAAGGCCAGGC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAATACATCTTGGGCAAAACTGTACTGGGAAGATTCCAAGGCCAGGC  650

seq1  TTGGATGGAACTGTCCACTGTACCTCCAACACTACAGCGATTGATCTAGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGGATGGAACTGTCCACTGTACCTCCAACACTACAGCGATTGATCTAGG  700

seq1  GCTAGGCCGCTGGGAAGCTTGAGTCTATGACTCTGAATTAAACAGTTTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAGGCCGCTGGGAAGCTTGAGTCTATGACTCTGAATTAAACAGTTTAT  750

seq1  CTCTCTGATGTGATATGAATGTTTGTGTTCCATCAAAGTGCATATTCTGA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCTGATGTGATATGAATGTTTGTGTTCCATCAAAGTGCATATTCTGA  800

seq1  AGTCTTAATCATCTAGATAGTGGCATGAAGAGATGCGGGCTGACTGGGAG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTCTTAATCATCTAGATAGTGGCATGAAGAGATGCGGGCTGACTGGGAG  850

seq1  GTTGATGAGGTTTTACGGATGGAATTCTCAGGAATAAACTTTCTTTCAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTGATGAGGTTTTACGGATGGAATTCTCAGGAATAAACTTTCTTTCAGT  900

seq1  TTACTTCTGTTATCTTTGATATTATAATTATATCACTCTATTCCTTCCCT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTACTTCTGTTATCTTTGATATTATAATTATATCACTCTATTCCTTCCCT  950

seq1  CCCTCTGACCTCTCCCATGCACCCTTCTTTGCT-CTCCTGCTCATGTGAT  999
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  CCCTCTGACCTCTCCCATGCACCCTTCTTTGCTCCTCCTGCTCATGTGAT  1000

seq1  CTTTCCAAATATATAAGCGCGATCTGCTCAGTCCTTATAATTTTTACTTG  1049
      |||||||||||||||||||||||||||||||||||||||  |||||||||
seq2  CTTTCCAAATATATAAGCGCGATCTGCTCAGTCCTTATA--TTTTACTTG  1048

seq1  CATC-TAT-ATATTTTCAGGGATGACTATTTAATATT-GGATGACCAGTT  1096
      |||| ||| ||||||||| |||||||||||| ||||| ||||||||||||
seq2  CATCTTATAATATTTTCA-GGATGACTATTTTATATTGGGATGACCAGTT  1097

seq1  -GGTGGGGGTTTTCCAGGAGAA-TTCGATTTCTTCTAACACAGTAAGCGT  1144
       |||||||| |||||||||||| ||||| |||||||||||||||||||||
seq2  GGGTGGGGGGTTTCCAGGAGAATTTCGAATTCTTCTAACACAGTAAGCGT  1147

seq1  TCTTCAGCCATGTGTAGCT  1163
      |||||||| |||| |||||
seq2  TCTTCAGCAATGT-TAGCT  1165