BAC Information

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BAC

Clone NameB6Ng01-088D20
Chromosome16 (Build37)
Map Location 12,524,018 - 12,525,110
singlet/doubletsinglet
Overlap genenone
Upstream gene4933437K13Rik, LOC100043171, C530044N13Rik, 2700045P11Rik
Downstream geneEG622509, LOC622553, Ercc4, Gt4-1, Mkl2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-088D20.bB6Ng01-088D20.g
ACCDH901150DH901151
length1,2021,086
definitionDH901150|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D20, 5' end.DH901151|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D20, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca
gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa
atcagggactagacaaggctgcccactttctccctaccttttcaacatag
tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg
atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat
gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc
tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag
tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag
ggaaacaacacccttctcaatagccacaaataatataaaatatctcggca
tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc
ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg
ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag
caatctacagattcaatgcaatccccattaaaattccaactcaattcttc
aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc
gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca
ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca
tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga
cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag
ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg
cacaactggttgtatcatgtagagatgcgaatcgatccatacttatctct
tgtactagtcaaatctagtggatcagacttcacataaaacagagacactg
aaacttatagagagaagtgggaagctgagatatgggcacaggaaatctga
cagaaagcatggctggcttagatccgaatgacaatgggaactatgatcca
agtctgcaagaccaagaacgtctttggactatagactcaccgaaacttgg
ga
gaattcaaggttctactttgtctttccttttgtagtccacttgatcccag
atgataaagctatgagtgacatgatttggaatgtgtcatgggtaacattc
cagggccatatttcaaaaagaaagtagtcctatcccttggatagaatgca
aacgttcgagctttctagttcctgttgatctgcctataagtttgttacag
agattgccaatatcagcctctagcagctgcagtgaagcccattctctgta
tcttacatgatgcttgttagaacgggctcaatttagttacacaagcatgt
gttgaacaaccagaagtcgctcactcatttgaaaaatatttattgaacac
atctctaaatgttccaggcagtgtgcaaagccctggagacaaaaattgtg
caagaaacaaacatgtcagctgcagagacaacacagtttactggggaata
aaaaatagagatgcagctgctttcgatttaaagtcttcacacaggacaat
gaatgagtaagacattttctgtacattgagctaagtgccattcgtagccc
ttggcacatctagatgacaggtaattctgtcttcaacactactaggtgtc
accctcctagtatgggagttttcaaaggatctcaactctagctttgcaag
attttgggctgaggatatttgtaagtttcatccagactcctgactcatag
tattcatagaataatacatttctgtcactttaagccattaaattgttgca
atttgttacagagcaacagaaaataagaaggcagtcccctctcaccttta
tgatattccatggtttctgtcaagtgctccattatccaagcctacatagt
ctctgaagctattcagagttgttatttccatgactcctaaggaaaaaaat
gttgggaggctaagagtcagaagttgaggctaaatccccttcattgaagt
gattacagcggttggcgggatgatcatgaagttctcatgagaccatatat
ctacatcaactaactaaatattataacacctccatgtattttccaaacca
cctggtgatatcagccagtcaggggctgtctagggt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_12524018_12525110
seq2: B6Ng01-088D20.g_68_1153 (reverse)

seq1  ACCCTAGCACAGCCCTCTGACTGGCTTGATTATCACCAGTGTGTTTGGAA  50
      ||||||| ||||||| ||||||||| ||| |||||||||   ||||||||
seq2  ACCCTAG-ACAGCCC-CTGACTGGC-TGA-TATCACCAGGTGGTTTGGAA  46

seq1  AATACATGGAGGTGTTTATTAATATTTTAGTTTAGTTGATGTAGATATAT  100
      ||||||||||||||||   ||||| ||||| |||||||||||||||||||
seq2  AATACATGGAGGTGTT--ATAATA-TTTAG-TTAGTTGATGTAGATATAT  92

seq1  GGTCTTCATGAGGACTTCATGAATCATCCCGCC-ACCGCTGTGATCACTT  149
      |||| ||||||| |||||||| ||||||||||| |||||||| |||||||
seq2  GGTC-TCATGAGAACTTCATG-ATCATCCCGCCAACCGCTGTAATCACTT  140

seq1  CAATGAAGGGGATTTAGCCTCAACTTCTGACTCTTAGCCTCCC-ACATTT  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAATGAAGGGGATTTAGCCTCAACTTCTGACTCTTAGCCTCCCAACATTT  190

seq1  TTTTCCTTAGGAGTCATGGAAATAACAACTCTG-ATAGCTTCAGAGACTA  247
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTCCTTAGGAGTCATGGAAATAACAACTCTGAATAGCTTCAGAGACTA  240

seq1  TGTAGGCTTGGATAATGGAGCACTTGACAGAAACCATGGAATATCATAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCTTGGATAATGGAGCACTTGACAGAAACCATGGAATATCATAAA  290

seq1  GGTGAGAGGGGACTGCCTTCTTATTTTCTGTTGCTCTGTAACAAATTGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGGGGACTGCCTTCTTATTTTCTGTTGCTCTGTAACAAATTGCA  340

seq1  ACAATTTAATGGCTTAAAGTGACAGAAATGTATTATTCTATGAATACTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTAATGGCTTAAAGTGACAGAAATGTATTATTCTATGAATACTAT  390

seq1  GAGTCAGGAGTCTGGATGAAACTTACAAATATCCTCAGCCCAAAATCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGAGTCTGGATGAAACTTACAAATATCCTCAGCCCAAAATCTTG  440

seq1  CAAAGCTAGAGTTGAGATCCTTTGAAAACTCCCATACTAGGAGGGTGACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAGAGTTGAGATCCTTTGAAAACTCCCATACTAGGAGGGTGACA  490

seq1  CCTAGTAGTGTTGAAGACAGAATTACCTGTCATCTAGATGTGCCAAGGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAGTGTTGAAGACAGAATTACCTGTCATCTAGATGTGCCAAGGGC  540

seq1  TACGAATGGCACTTAGCTCAATGTACAGAAAATGTCTTACTCATTCATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAATGGCACTTAGCTCAATGTACAGAAAATGTCTTACTCATTCATTG  590

seq1  TCCTGTGTGAAGACTTTAAATCGAAAGCAGCTGCATCTCTATTTTTTATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGAAGACTTTAAATCGAAAGCAGCTGCATCTCTATTTTTTATT  640

seq1  CCCCAGTAAACTGTGTTGTCTCTGCAGCTGACATGTTTGTTTCTTGCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTAAACTGTGTTGTCTCTGCAGCTGACATGTTTGTTTCTTGCACA  690

seq1  ATTTTTGTCTCCAGGGCTTTGCACACTGCCTGGAACATTTAGAGATGTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTCCAGGGCTTTGCACACTGCCTGGAACATTTAGAGATGTGT  740

seq1  TCAATAAATATTTTTCAAATGAGTGAGCGACTTCTGGTTGTTCAACACAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATATTTTTCAAATGAGTGAGCGACTTCTGGTTGTTCAACACAT  790

seq1  GCTTGTGTAACTAAATTGAGCCCGTTCTAACAAGCATCATGTAAGATACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGTAACTAAATTGAGCCCGTTCTAACAAGCATCATGTAAGATACA  840

seq1  GAGAATGGGCTTCACTGCAGCTGCTAGAGGCTGATATTGGCAATCTCTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGGCTTCACTGCAGCTGCTAGAGGCTGATATTGGCAATCTCTGT  890

seq1  AACAAACTTATAGGCAGATCAACAGGAACTAGAAAGCTCGAACGTTTGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTTATAGGCAGATCAACAGGAACTAGAAAGCTCGAACGTTTGCA  940

seq1  TTCTATCCAAGGGATAGGACTACTTTCTTTTTGAAATATGGCCCTGGAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCAAGGGATAGGACTACTTTCTTTTTGAAATATGGCCCTGGAAT  990

seq1  GTTACCCATGACACATTCCAAATCATGTCACTCATAGCTTTATCATCTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCATGACACATTCCAAATCATGTCACTCATAGCTTTATCATCTGG  1040

seq1  GATCAAGTGGACTACAAAAGGAAAGACAAAGTAGAACCTTGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGTGGACTACAAAAGGAAAGACAAAGTAGAACCTTGAATTC  1086