MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	B6Ng01-088D20
Chromosome	16 (Build37)
Map Location	12,524,018 - 12,525,110
singlet/doublet	singlet
Overlap gene	none
Upstream gene	4933437K13Rik, LOC100043171, C530044N13Rik, 2700045P11Rik
Downstream gene	EG622509, LOC622553, Ercc4, Gt4-1, Mkl2
Link	Open Mouse BAC browser

Click to get alignment info.

name	4933437K13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74478 MGI:1921728
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC100043171 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:100043171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	C530044N13Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:223978 MGI:2443300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	2700045P11Rik (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:72555 MGI:1919805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 Protein

name	EG622509 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:622509 MGI:3646646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 81 Proteins

name	LOC622553 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:622553
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 Proteins pseudo : _no_value

name	Ercc4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:50505 MGI:1354163
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Gt4-1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:107459 MGI:107691
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Mkl2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:239719 MGI:3050795
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	4933437K13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142385413 GeneID:74478 MGI:1921728
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA 4933437K13 gene transcript_id : NM_028964.2

name	LOC100043171 (CDS detail)
type	mRNA
link	vega ensembl NCBI
xref	GI:149267351 GeneID:100043171
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : hypothetical protein LOC100043171 transcript_id : XM_001480241.1

name	C530044N13Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142351105 GeneID:223978 MGI:2443300
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RIKEN cDNA C530044N13 gene transcript_id : NM_146067.3

name	2700045P11Rik (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267278 GeneID:72555 MGI:1919805
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 11 ESTs, 1 Protein product : RIKEN cDNA 2700045P11 gene, transcript variant 2 transcript_id : XM_980313.2

name	EG622509 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149267280 GeneID:622509 MGI:3646646
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 81 Proteins product : predicted gene, EG622509 transcript_id : XM_886942.2

name	Ercc4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:7657063 GeneID:50505 MGI:1354163
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : excision repair cross-complementing rodent repair deficiency, complementation group 4 transcript_id : NM_015769.1

name	Gt4-1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:32469512 GeneID:107459 MGI:107691
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gene trap insertion site 4-1 transcript_id : NM_181860.1

name	Mkl2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:23956387 GeneID:239719 MGI:3050795
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : MKL/myocardin-like 2 transcript_id : NM_153588.1

name	4933437K13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21312778 CCDS:CCDS27963.1 GeneID:74478 MGI:1921728
definition	GO_function : GO:0035091 - phosphoinositide binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IEA] GO_process : GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 product : hypothetical protein LOC74478 protein_id : NP_083240.1

name	LOC100043171 (CDS detail)
type	CDS
link	vega ensembl NCBI
xref	GI:149267352 GeneID:100043171
definition	codon_start : 1 product : hypothetical protein protein_id : XP_001480291.1

name	C530044N13Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31981882 CCDS:CCDS27964.1 GeneID:223978 MGI:2443300
definition	codon_start : 1 product : hypothetical protein LOC223978 protein_id : NP_666179.2

name	2700045P11Rik (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267279 GeneID:72555 MGI:1919805
definition	codon_start : 1 product : hypothetical protein LOC72555 isoform 2 protein_id : XP_985407.2

name	EG622509 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149267281 GeneID:622509 MGI:3646646
definition	codon_start : 1 product : hypothetical protein protein_id : XP_892035.2

name	Ercc4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:7657064 GeneID:50505 MGI:1354163
definition	GO_component : GO:0000109 - nucleotide-excision repair complex [Evidence ISS] GO_function : GO:0004519 - endonuclease activity [Evidence IEA]; GO:0000287 - magnesium ion binding [Evidence IEA] GO_process : GO:0006259 - DNA metabolism [Evidence IEA]; GO:0006289 - nucleotide-excision repair [Evidence ISS]; GO:0006974 - response to DNA damage stimulus [Evidence IEA] codon_start : 1 exception : mismatches in translation function : remove DNA damage in nucleotide excision repair pathway product : excision repair cross-complementing rodent repair deficiency, complementation group 4 protein_id : NP_056584.1

name	Gt4-1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:32469513 GeneID:107459 MGI:107691
definition	codon_start : 1 product : gene trap insertion site 4-1 protein_id : NP_862908.1

name	Mkl2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:23956388 GeneID:239719 MGI:3050795
definition	GO_component : GO:0005737 - cytoplasm [Evidence IDA]; GO:0005634 - nucleus [Evidence IDA] [Evidence IC] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0003677 - DNA binding [Evidence IEA]; GO:0005515 - protein binding [Evidence IPI]; GO:0003713 - transcription coactivator activity [Evidence IDA] GO_process : GO:0048514 - blood vessel morphogenesis [Evidence IMP]; GO:0030154 - cell differentiation [Evidence IEA]; GO:0007275 - development [Evidence IEA]; GO:0007507 - heart development [Evidence IMP]; GO:0045844 - positive regulation of striated muscle development [Evidence ISS]; GO:0045941 - positive regulation of transcription [Evidence IDA]; GO:0045944 - positive regulation of transcription from RNA polymerase II promoter [Evidence IDA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0051145 - smooth muscle cell differentiation [Evidence IMP]; GO:0007519 - striated muscle development [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 exception : mismatches in translation note : myocardin-related transcription factor B product : MKL/myocardin-like 2 protein_id : NP_705816.1

name	LOC622553 (CDS detail)
type	exon
link	vega ensembl
xref	GeneID:622553
definition	number : 1 pseudo : _no_value

clone name	MSMg01-180P16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-109I11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-288I23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-127B13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147C09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101N19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-319B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-374M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-388G11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-431E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-177K13
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-202J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-385J02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-395F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-547N24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-335M05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-086A03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-074P05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-386N03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-199M19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388I02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-537O09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-496E16
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-503I03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-475J10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-147B06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-141C07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-388E02
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-499J23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-389C01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-304E10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-182O06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-487E24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530F18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-467E14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545F14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-315N22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-499A16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-374M10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-397B11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-472L04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-467H04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-405N07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-444G20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-341D22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-321K15
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342O06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-323J04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-328K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-078L18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-181B23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-514F01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-469E16
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-052F01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366L03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-530L01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-160G10
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-461L19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-293C02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293I04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-210E20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-385D17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173G09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-398F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-328C20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-199E22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-334M15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-443J06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-451N04
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-546F03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-089J13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-216L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084K10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-263G18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036N08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-152L17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090G06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339A16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-324E20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-186C19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233F02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-339B02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-139B21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-234P14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-150K09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-347B07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-046N15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-086B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149G20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327P02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-331O20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207C15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-233J18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-090A24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-055J21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-241E17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-245K14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-244K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-227I10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-281C16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-045D05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-079M24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-341D08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099A18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-294C14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-225M19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-121J03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-156B11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-249B22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-327A23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-046M22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-088D20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-220K23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-044J02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-302G17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302H17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-267K22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-310I19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-025C20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-112P15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-135B09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-016H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268L04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-123F08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-186G24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-207O10
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-249D17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-084J24
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-347N02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-057K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-314K05
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-155M02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-310K06
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187P16
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-282E09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086I05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-341A09
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-281E22
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086P23
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-086P15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-183E24
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-345B19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098P23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-213H20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-189M08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-294J13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337I14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-074K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-095K08
singlet/doublet	singlet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	B6Ng01-088D20.b	B6Ng01-088D20.g
ACC	DH901150	DH901151
length	1,202	1,086
definition	DH901150\|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D20, 5' end.	DH901151\|Mus musculus domesticus DNA, BAC clone: B6Ng01-088D20, 3' end.
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	gaattcaaggccaatacctaaacatgataaaagcaatctacagcaaacca gtagccaacatcaaagtaaatggagagaagctggaagcaatcccactaaa atcagggactagacaaggctgcccactttctccctaccttttcaacatag tacttgaagtattagccagagcaattcgacaacaaaaggagatcaagggg atacaaattggaaaagaggaagtcaaaatatcactttttgcagatgatat gatagtatatataagtgaccctaaaaattccaacagagaactcctaaacc tgataaacagcttcggtgaagtagctggatataaaattaactcaaacaag tcaatggcctttctctacacaaagaataaacaggctgagaaagaaattag ggaaacaacacccttctcaatagccacaaataatataaaatatctcggca tgactctaacgaaggaagtgaaagatctgtatgataaaaacttcaagtcc ctgaagaaagaaattaaagaagatctcagaagatggaaagatctcccatg ctcatggattggcaggaccaacattgtaaaaatggctatcttgccaaaag caatctacagattcaatgcaatccccattaaaattccaactcaattcttc aacgaattagaaggagcaatttgcaaattcatctggaataacaaaaaacc gaggatagcaaaaactcttctcaaggataaaagaacctctggtggaatca ccatgcctgacctaaagctttactacagagcaattgtgataaaaactgca tggtactggtatagagacagacaagtggaccaatggaatagaattgaaga cccagaaatgaacccacacacctatggtcacttgatcttcgacaagggag ccaaaaccatccagtggaagaaagacagcattttcaacaattggtgctgg cacaactggttgtatcatgtagagatgcgaatcgatccatacttatctct tgtactagtcaaatctagtggatcagacttcacataaaacagagacactg aaacttatagagagaagtgggaagctgagatatgggcacaggaaatctga cagaaagcatggctggcttagatccgaatgacaatgggaactatgatcca agtctgcaagaccaagaacgtctttggactatagactcaccgaaacttgg ga	gaattcaaggttctactttgtctttccttttgtagtccacttgatcccag atgataaagctatgagtgacatgatttggaatgtgtcatgggtaacattc cagggccatatttcaaaaagaaagtagtcctatcccttggatagaatgca aacgttcgagctttctagttcctgttgatctgcctataagtttgttacag agattgccaatatcagcctctagcagctgcagtgaagcccattctctgta tcttacatgatgcttgttagaacgggctcaatttagttacacaagcatgt gttgaacaaccagaagtcgctcactcatttgaaaaatatttattgaacac atctctaaatgttccaggcagtgtgcaaagccctggagacaaaaattgtg caagaaacaaacatgtcagctgcagagacaacacagtttactggggaata aaaaatagagatgcagctgctttcgatttaaagtcttcacacaggacaat gaatgagtaagacattttctgtacattgagctaagtgccattcgtagccc ttggcacatctagatgacaggtaattctgtcttcaacactactaggtgtc accctcctagtatgggagttttcaaaggatctcaactctagctttgcaag attttgggctgaggatatttgtaagtttcatccagactcctgactcatag tattcatagaataatacatttctgtcactttaagccattaaattgttgca atttgttacagagcaacagaaaataagaaggcagtcccctctcaccttta tgatattccatggtttctgtcaagtgctccattatccaagcctacatagt ctctgaagctattcagagttgttatttccatgactcctaaggaaaaaaat gttgggaggctaagagtcagaagttgaggctaaatccccttcattgaagt gattacagcggttggcgggatgatcatgaagttctcatgagaccatatat ctacatcaactaactaaatattataacacctccatgtattttccaaacca cctggtgatatcagccagtcaggggctgtctagggt
quality values	Open. Hide. 61 43 35 40 61 43 27 47 61 61 61 47 43 61 61 61 61 61 61 61 61 55 61 49 61 19 12 11 12 12 13 12 13 18 13 27 59 59 61 61 61 59 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 59 59 44 37 36 28 44 52 59 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 55 61 61 59 61 61 61 61 61 61 59 59 61 59 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 59 59 59 59 59 59 61 59 59 59 61 61 61 59 61 59 59 61 59 61 61 59 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 59 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 59 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 47 61 61 61 61 61 61 61 61 61 61 61 47 61 52 61 61 61 61 61 50 61 61 57 53 47 57 57 57 57 53 57 57 53 52 53 45 57 57 53 42 47 57 57 57 57 57 57 57 57 57 57 53 57 53 57 57 57 57 57 53 47 33 57 57 57 47 47 57 53 53 57 57 53 53 52 57 52 45 57 52 33 57 57 57 53 52 57 57 57 57 57 46 52 53 52 52 57 57 53 53 57 52 38 27 53 53 57 53 45 53 52 53 53 53 57 52 31 53 57 50 57 50 50 53 53 45 57 57 34 57 52 38 53 44 39 53 57 57 53 44 40 57 50 53 50 42 33 53 53 53 57 57 47 50 40 32 37 39 24 41 41 41 38 37 33 38 39 52 29 57 40 31 47 40 53 40 57 57 57 37 37 53 52 40 53 53 52 42 33 42 35 57 37 28 53 57 57 53 35 57 30 44 40 48 48 36 57 57 36 46 35 30 33 30 44 27 37 45 31 32 41 29 45 39 45 30 17 47 32 21 46 44 31 32 31 51 29 32 30 28 30 46 27 30 48 30 34 44 31 38 48 46 35 44 35 28 29 46 46 46 31 27 29 48 29 28 29 30 41 24 28 29 29 46 35 32 28 29 28 29 39 29 29 29 18 30 32 28 27 31 31 28 35 32 29 24 34 27 26 28 29 32 26 34 29 28 28 31 27 23 33 27 28 27 12 26 8 36 30 18 22 46 51 34 36 31 27 33 28 39 39 14 29 22 33 24 36 36 29 28 28 23 41 18 29 16 23 27 23 29 20 24 35 34 34 33 17 28 28 23 11 27 51 23 24 16 21 21 9 28 32 8 6 10 23 33 20 29 18 25 28 38 23 25 32 21 25 32 18 13 19 13 14 24 36 22 31 51 51 24 34 17 23 22 16 23 23 20 38 31 14 29 28 34 29 29 18 12 26 15 23 20 24 16 26 17 12 18 30 13 28 24 23 28 32 19 14 14 44 11 30 11 25 19 13 33 21 31 29 26 31 23 16 22 25 30 26 19 19 17 26 20 23 7 10 6 9 33 18 23 30 17 6 4 5 21 14 36 12 17 21 11 29 10 12 8 26 9 24 9 13 9 4 4 11 15 11 6 5 5 21 11 32 32 17 16 4 5 9 4 5 8 4 16 19 20 12 35 13 20 17 20 19 23 14 15 23 25 9 7 25 18 6 11 26 30 15 6 13 7 16 10 7 27 5 7 6 6 12 15 21 14 12 4 7 8 22 18 13 13 6 4 6 4 6 18 8 5 4 13 8 3 4 10 18 7 13 14 16 9 3 3 6 8 4 16 5 20 5 7 5 10 13 7 17 10 8 13 4 18 4 12 19 12 7 3 4 4 16 10 4 4 2 3 3 3 5 3 4 1 4 11 20 8 4 16 4 6 4 13 5 4 5 8 5 3 4 5 4 7 15 4 6 9 3 1 4 1 2 5 7 11 3 11 6 4 14 9 8 5 5 5 4 7 13 7 13 6	Open. Hide. 61 47 61 61 55 23 15 8 13 28 18 22 22 21 18 24 55 55 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 59 52 59 52 36 35 30 28 28 35 44 61 61 61 61 61 61 61 61 61 61 61 61 59 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 61 61 55 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 59 61 59 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 59 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 55 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 55 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 52 61 61 61 61 61 53 61 61 61 61 61 61 61 61 61 61 61 61 61 53 61 53 61 61 61 61 61 61 61 61 53 53 61 50 61 61 57 57 57 57 46 47 57 57 57 57 57 47 50 53 53 57 53 53 57 52 53 53 53 53 53 57 53 53 35 47 47 57 53 57 57 53 53 41 57 53 53 53 53 57 52 47 57 47 46 53 53 57 53 53 57 57 53 30 46 52 40 57 53 52 57 53 53 43 52 53 57 53 52 39 47 47 47 47 47 47 47 35 53 57 48 41 57 57 41 57 40 53 57 57 53 41 28 57 41 38 57 37 50 38 53 34 30 53 53 57 53 52 37 33 47 52 45 50 35 43 26 53 53 52 24 57 57 52 53 57 53 37 53 50 53 24 50 38 23 37 53 57 53 53 38 41 35 42 33 50 50 50 25 50 37 53 24 38 52 36 40 42 38 33 42 41 29 52 37 29 32 41 37 35 47 42 40 44 33 38 44 40 31 53 26 14 18 30 37 37 33 52 57 53 35 44 53 37 37 23 30 30 57 31 14 44 12 18 20 22 34 29 18 37 13 13 44 53 20 57 40 30 20 29 37 39 53 40 30 31 29 44 25 31 46 19 30 24 21 31 24 28 51 47 46 28 29 18 26 27 47 37 25 40 19 28 36 30 33 48 46 33 27 28 28 30 20 29 33 24 46 34 29 24 21 35 23 28 24 10 21 35 26 21 16 31 24 51 17 31 17 33 24 28 23 28 30 15 35 26 29 25 33 24 28 27 29 29 29 19 25 17 25 29 23 28 34 33 30 28 28 29 36 29 30 22 25 28 28 38 14 20 29 13 9 14 18 17 8 25 9 11 26 10 11 41 16 29 51 38 17 33 21 28 28 28 21 28 38 22 14 19 21 5 11 13 46 51 51 51 46 29 22 16 5 7 12 46 27 29 20 20 15 29 22 29 21 36 15 34 31 25 26 33 39 17 28 34 28 24 23 15 19 25 14 46 14 20 29 29 32 18 12 23 24 28 26 24 28 22 34 19 31 23 9 6 11 8 11 7 8 9 8 19 5 5 18 23 16 16 51 32 12 14 19 31 28 5 5 8 14 17 22 7 5 10 23 14 23 17 16 9 51 7 17 16 24 29 33 14 6 8 12 17 11 13 32 18 13 15 14 14 20 6 21 8 19 8 12 19 16 6 14 18 15 39 16 20 23 6 7 10 18 9 9 28 9 9 12 6 7 10 31 12 10 5 21 12 25 18 9 6 12 4 4 8 19 4 5 7 21 9 30 5 7 30 11 19 20 5 15 8 13 4 1 4 5 6 10 5 4 4 3 9 6 17 4 3 4

Alignment Information

BAC End 1

BAC End 2

seq1: chr16_12524018_12525110
seq2: B6Ng01-088D20.g_68_1153 (reverse)

seq1  ACCCTAGCACAGCCCTCTGACTGGCTTGATTATCACCAGTGTGTTTGGAA  50
      ||||||| ||||||| ||||||||| ||| |||||||||   ||||||||
seq2  ACCCTAG-ACAGCCC-CTGACTGGC-TGA-TATCACCAGGTGGTTTGGAA  46

seq1  AATACATGGAGGTGTTTATTAATATTTTAGTTTAGTTGATGTAGATATAT  100
      ||||||||||||||||   ||||| ||||| |||||||||||||||||||
seq2  AATACATGGAGGTGTT--ATAATA-TTTAG-TTAGTTGATGTAGATATAT  92

seq1  GGTCTTCATGAGGACTTCATGAATCATCCCGCC-ACCGCTGTGATCACTT  149
      |||| ||||||| |||||||| ||||||||||| |||||||| |||||||
seq2  GGTC-TCATGAGAACTTCATG-ATCATCCCGCCAACCGCTGTAATCACTT  140

seq1  CAATGAAGGGGATTTAGCCTCAACTTCTGACTCTTAGCCTCCC-ACATTT  198
      ||||||||||||||||||||||||||||||||||||||||||| ||||||
seq2  CAATGAAGGGGATTTAGCCTCAACTTCTGACTCTTAGCCTCCCAACATTT  190

seq1  TTTTCCTTAGGAGTCATGGAAATAACAACTCTG-ATAGCTTCAGAGACTA  247
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  TTTTCCTTAGGAGTCATGGAAATAACAACTCTGAATAGCTTCAGAGACTA  240

seq1  TGTAGGCTTGGATAATGGAGCACTTGACAGAAACCATGGAATATCATAAA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGGCTTGGATAATGGAGCACTTGACAGAAACCATGGAATATCATAAA  290

seq1  GGTGAGAGGGGACTGCCTTCTTATTTTCTGTTGCTCTGTAACAAATTGCA  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGAGAGGGGACTGCCTTCTTATTTTCTGTTGCTCTGTAACAAATTGCA  340

seq1  ACAATTTAATGGCTTAAAGTGACAGAAATGTATTATTCTATGAATACTAT  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAATTTAATGGCTTAAAGTGACAGAAATGTATTATTCTATGAATACTAT  390

seq1  GAGTCAGGAGTCTGGATGAAACTTACAAATATCCTCAGCCCAAAATCTTG  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTCAGGAGTCTGGATGAAACTTACAAATATCCTCAGCCCAAAATCTTG  440

seq1  CAAAGCTAGAGTTGAGATCCTTTGAAAACTCCCATACTAGGAGGGTGACA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCTAGAGTTGAGATCCTTTGAAAACTCCCATACTAGGAGGGTGACA  490

seq1  CCTAGTAGTGTTGAAGACAGAATTACCTGTCATCTAGATGTGCCAAGGGC  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTAGTAGTGTTGAAGACAGAATTACCTGTCATCTAGATGTGCCAAGGGC  540

seq1  TACGAATGGCACTTAGCTCAATGTACAGAAAATGTCTTACTCATTCATTG  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACGAATGGCACTTAGCTCAATGTACAGAAAATGTCTTACTCATTCATTG  590

seq1  TCCTGTGTGAAGACTTTAAATCGAAAGCAGCTGCATCTCTATTTTTTATT  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTGTGAAGACTTTAAATCGAAAGCAGCTGCATCTCTATTTTTTATT  640

seq1  CCCCAGTAAACTGTGTTGTCTCTGCAGCTGACATGTTTGTTTCTTGCACA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCCAGTAAACTGTGTTGTCTCTGCAGCTGACATGTTTGTTTCTTGCACA  690

seq1  ATTTTTGTCTCCAGGGCTTTGCACACTGCCTGGAACATTTAGAGATGTGT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTTGTCTCCAGGGCTTTGCACACTGCCTGGAACATTTAGAGATGTGT  740

seq1  TCAATAAATATTTTTCAAATGAGTGAGCGACTTCTGGTTGTTCAACACAT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAAATATTTTTCAAATGAGTGAGCGACTTCTGGTTGTTCAACACAT  790

seq1  GCTTGTGTAACTAAATTGAGCCCGTTCTAACAAGCATCATGTAAGATACA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTGTGTAACTAAATTGAGCCCGTTCTAACAAGCATCATGTAAGATACA  840

seq1  GAGAATGGGCTTCACTGCAGCTGCTAGAGGCTGATATTGGCAATCTCTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGAATGGGCTTCACTGCAGCTGCTAGAGGCTGATATTGGCAATCTCTGT  890

seq1  AACAAACTTATAGGCAGATCAACAGGAACTAGAAAGCTCGAACGTTTGCA  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACAAACTTATAGGCAGATCAACAGGAACTAGAAAGCTCGAACGTTTGCA  940

seq1  TTCTATCCAAGGGATAGGACTACTTTCTTTTTGAAATATGGCCCTGGAAT  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTATCCAAGGGATAGGACTACTTTCTTTTTGAAATATGGCCCTGGAAT  990

seq1  GTTACCCATGACACATTCCAAATCATGTCACTCATAGCTTTATCATCTGG  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACCCATGACACATTCCAAATCATGTCACTCATAGCTTTATCATCTGG  1040

seq1  GATCAAGTGGACTACAAAAGGAAAGACAAAGTAGAACCTTGAATTC  1093
      ||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCAAGTGGACTACAAAAGGAAAGACAAAGTAGAACCTTGAATTC  1086

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information