BAC Information

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BAC

Clone NameB6Ng01-091G06
Chromosome16 (Build37)
Map Location 31,280,859 - 31,458,727
singlet/doubletdoublet
Overlap geneApod, 1700007E05Rik, Bdh1
Upstream geneLrrc15, Gp5, Atp13a3, Tmem44, Lsg1, BC022623, LOC100043122, AI480653, Centb2, Ppp1r2
Downstream geneGm536, Dlg1, Mfi2, LOC677155, Pigz, 0610012G03Rik, Ncbp2, Senp5, Pak2, Pigx, 1500031L02Rik, Lrrc33, Bex6, Fbxo45, Wdr53, 2310010M20Rik, Rnf168, LOC666966, Ubxd7, Tm4sf19, 0610012D17Rik, Pcyt1a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-091G06.bB6Ng01-091G06.g
ACCDH903428DH903429
length983592
definitionDH903428|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G06, 5' end.DH903429|Mus musculus domesticus DNA, BAC clone: B6Ng01-091G06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(31,280,859 - 31,281,840)(31,458,136 - 31,458,727)
sequence
gaattccaatacttatctttcctatctctaatcaagaacattctagggca
caaaagaagagaccatttactgttgtttttttttttttttttttttttgt
atttgggagtgctgtggtgtcttaaatgaaaagtgaggcagaggaggctg
aaggtgtgtcctggtagcagaatgcacccttagcaaccacactgccctgg
gtttaatatctagcccctctcctgagaaggtagcccatgggaaaactaac
atttccttcctatattttaacatggcacccgtaccattattgtctcatag
gcaatcaattaaattatttctcctagctgtctgtcattgtgtccctagtt
ggaagcctcaatcagtccaagattgacatgtagtcaatattaattttgcc
ctaattttataaaagtctatcacacccctaatactctgacaaacgtttgt
gtatatatgtgttcaggtcagtatgtatgaacatgtgagtgcatacatgt
acaagtggaggccagaaattgacctttggttgtctttctcagtcactctc
caccttacctttttagaaatggtctgtcccagctagttttatgccaagtt
gacacaagctaaagtcacctgacaggagggtatctccattgagaaaatgt
ctccataggatctaacttgaagggaagcctacagggtattttcttaatta
gtgattgatgggagaaggcccagcccattgtgggtggtgtcatccctggg
ctggtggttctgggttctataagaaagtaggttgatcaagccctgaggag
caagccagtaagcagcactcctccatacttctgcatcagctgctccagat
ttctcctggtttaagttcccatcttggcatccctcagtagacttgtgact
ctagatacgtaagcaaaataaacccttccctccccaagttgcttttggtc
ttggtgtttctatcacagcatggtacagctaag
ctctctgtgggaccctctttgtctcagcactgcctgcacccgcctgtggc
tgtccaggttcctttgctttctcctggcgctgggcttcagtttcaggcta
gacactgccaggagtgtaggatcggtttccaagggggtctttgctcttct
ctttgttccctggcagtgtccaagtaggtggtcaaacactcttgaaaaga
ccccaagtttgtgtgaacgaaaacgcccgggcctgagcaggctccagttg
agggggcagcgcgccctctagtggcagtcctagactttgcaacaagatgc
acaaaagtgtaaagctgagatgtgtgtaaagctggcacttaaatacccgg
cccaagacttgctgccacctggaacgtggtgggatttggtttggatccaa
atactgagaccctaggaaacttcagggacaagcagccttcaaatgcaaaa
gtcccttgattgagaacacaggctctctaactgtgtctcagtttaattaa
aaagaagttcccaatacaaagaagaggtgaccaccctgaagtctatggag
caggtgtgtgtgtgtgtgtgtgatgtgtgtgtgtgtgtgtga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_31280859_31281840
seq2: B6Ng01-091G06.b_43_1025

seq1  GAATTCCAATACTTATCTTTCCTATCTCTAATCTAGAACATTCTAGGGCA  50
      ||||||||||||||||||||||||||||||||| ||||||||||||||||
seq2  GAATTCCAATACTTATCTTTCCTATCTCTAATCAAGAACATTCTAGGGCA  50

seq1  CAAAAGAAGAGACCATTTACTGTTGTTTTTTTTTTTTTTTTTTTTTTTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAAGAAGAGACCATTTACTGTTGTTTTTTTTTTTTTTTTTTTTTTTGT  100

seq1  ATTTGGGAGTGCTGTGGTGTCTTAAATGAAAAGTGAGGCAGAGGAGGCTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGGGAGTGCTGTGGTGTCTTAAATGAAAAGTGAGGCAGAGGAGGCTG  150

seq1  AAGGTGTGTCCTGGTAGCAGAATGCACCCTTAGCAACCACACTGCCCTGG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGTGTGTCCTGGTAGCAGAATGCACCCTTAGCAACCACACTGCCCTGG  200

seq1  GTTTAATATCTAGCCCCTCTCCTGAGAAGGTAGCCCATGGGAAAACTAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTAATATCTAGCCCCTCTCCTGAGAAGGTAGCCCATGGGAAAACTAAC  250

seq1  ATTTCCTTCCTATATTTTAACATGGCACCCGTACCATTATTGTCTCATAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTCCTTCCTATATTTTAACATGGCACCCGTACCATTATTGTCTCATAG  300

seq1  GCAATCAATTAAATTATTTCTCCTAGCTGTCTGTCATTGTGTCCCTAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAATCAATTAAATTATTTCTCCTAGCTGTCTGTCATTGTGTCCCTAGTT  350

seq1  GGAAGCCTCAATCAGTCCAAGATTGACATGTAGTCAATATTAATTTTGCC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAAGCCTCAATCAGTCCAAGATTGACATGTAGTCAATATTAATTTTGCC  400

seq1  CTAATTTTATAAAAGTCTATCACACCCCTAATACTCTGACAAACGTTTGT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTTTATAAAAGTCTATCACACCCCTAATACTCTGACAAACGTTTGT  450

seq1  GTATATATGTGTTCAGGTCAGTATGTATGAACATGTGAGTGCATACATGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTATATATGTGTTCAGGTCAGTATGTATGAACATGTGAGTGCATACATGT  500

seq1  ACAAGTGGAGGCCAGAAATTGACCTTTGGTTGTCTTTCTCAGTCACTCTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGTGGAGGCCAGAAATTGACCTTTGGTTGTCTTTCTCAGTCACTCTC  550

seq1  CACCTTACCTTTTTAGAAATGGTCTGTCCCAGCTAGTTTTATGCCAAGTT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCTTACCTTTTTAGAAATGGTCTGTCCCAGCTAGTTTTATGCCAAGTT  600

seq1  GACACAAGCTAAAGTCACCTGACAGGAGGGTATCTCCATTGAGAAAATGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACACAAGCTAAAGTCACCTGACAGGAGGGTATCTCCATTGAGAAAATGT  650

seq1  CTCCATAGGATCTAACTTGAAGGGAAGCCTACAGGGTATTTTCTTAATTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCATAGGATCTAACTTGAAGGGAAGCCTACAGGGTATTTTCTTAATTA  700

seq1  GTGATTGATGGGAGAAGGCCCAGCCCATTGTGGGTGGTGTCATCCCTGGG  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATTGATGGGAGAAGGCCCAGCCCATTGTGGGTGGTGTCATCCCTGGG  750

seq1  CTGGTGGTTCTGGGTTCTATAAGAAAGTAGGTTGATCAAGCCCTGAGGAG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGGTTCTGGGTTCTATAAGAAAGTAGGTTGATCAAGCCCTGAGGAG  800

seq1  CAAGCCAGTAAGCAGCACTCCTCCATACCTCTGCATCAGCTGCTCCCAGA  850
      |||||||||||||||||||||||||||| ||||||||||||||| |||||
seq2  CAAGCCAGTAAGCAGCACTCCTCCATACTTCTGCATCAGCTGCT-CCAGA  849

seq1  TTCCTCCTGGTTTAAGTTCCCATCTTGGCATCCCTCAGTAGAC-TGTGAC  899
      || |||||||||||||||||||||||||||||||||||||||| ||||||
seq2  TTTCTCCTGGTTTAAGTTCCCATCTTGGCATCCCTCAGTAGACTTGTGAC  899

seq1  TCTAGATACGTAAGCAAAATAAACCCTTCCCTCCCCAAGTTGCTTTTGGT  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGATACGTAAGCAAAATAAACCCTTCCCTCCCCAAGTTGCTTTTGGT  949

seq1  CTT-GTGTTTC-ATCACAGCAATGGTAACGCTAAG  982
      ||| ||||||| |||||||| ||||||  ||||||
seq2  CTTGGTGTTTCTATCACAGC-ATGGTACAGCTAAG  983

seq1: chr16_31458136_31458727
seq2: B6Ng01-091G06.g_76_667 (reverse)

seq1  TCACACACACACACACACATCACACACACACACACACACCTGCTCCATAG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCACACACACACACACACATCACACACACACACACACACCTGCTCCATAG  50

seq1  ACTTCAGGGTGGTCACCTCTTCTTTGTATTGGGAACTTCTTTTTAATTAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTTCAGGGTGGTCACCTCTTCTTTGTATTGGGAACTTCTTTTTAATTAA  100

seq1  ACTGAGACACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCAT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGAGACACAGTTAGAGAGCCTGTGTTCTCAATCAAGGGACTTTTGCAT  150

seq1  TTGAAGGCTGCTTGTCCCTGAAGTTTCCTAGGGTCTCAGTATTTGGATCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAAGGCTGCTTGTCCCTGAAGTTTCCTAGGGTCTCAGTATTTGGATCC  200

seq1  AAACCAAATCCCACCACGTTCCAGGTGGCAGCAAGTCTTGGGCCGGGTAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACCAAATCCCACCACGTTCCAGGTGGCAGCAAGTCTTGGGCCGGGTAT  250

seq1  TTAAGTGCCAGCTTTACACACATCTCAGCTTTACACTTTTGTGCATCTTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGCCAGCTTTACACACATCTCAGCTTTACACTTTTGTGCATCTTG  300

seq1  TTGCAAAGTCTAGGACTGCCACTAGAGGGCGCGCTGCCCCCTCAACTGGA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCAAAGTCTAGGACTGCCACTAGAGGGCGCGCTGCCCCCTCAACTGGA  350

seq1  GCCTGCTCAGGCCCGGGCGTTTTCGTTCACACAAACTTGGGGTCTTTTCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTGCTCAGGCCCGGGCGTTTTCGTTCACACAAACTTGGGGTCTTTTCA  400

seq1  AGAGTGTTTGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGC  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGTGTTTGACCACCTACTTGGACACTGCCAGGGAACAAAGAGAAGAGC  450

seq1  AAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAGCCTGA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGACCCCCTTGGAAACCGATCCTACACTCCTGGCAGTGTCTAGCCTGA  500

seq1  AACTGAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAAGCCCAGCGCCAGGAGAAAGCAAAGGAACCTGGACAGCCACAGG  550

seq1  CGGGTGCAGGCAGTGCTGAGACAAAGAGGGTCCCACAGAGAG  592
      ||||||||||||||||||||||||||||||||||||||||||
seq2  CGGGTGCAGGCAGTGCTGAGACAAAGAGGGTCCCACAGAGAG  592