BAC Information

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BAC

Clone NameB6Ng01-095F05
Chromosome16 (Build37)
Map Location 57,278,178 - 57,279,302
singlet/doubletsinglet
Overlap geneTmem30c
Upstream geneLOC672835, Abi3bp, Tfg, Gpr128, Tmem45a, LOC668026, LOC668036, 2310005G13Rik, Tomm70a, Nit2, Tbc1d23
Downstream gene2610528E23Rik, 4631422O05Rik, Col8a1, LOC435480, LOC629342, LOC100043477
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-095F05.bB6Ng01-095F05.g
ACCDH906299DH906300
length1,1021,145
definitionDH906299|Mus musculus domesticus DNA, BAC clone: B6Ng01-095F05, 5' end.DH906300|Mus musculus domesticus DNA, BAC clone: B6Ng01-095F05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaccatcaaaccaccgcctgcagctttggcagaatacaaagataa
gcacaggtccattatccaatcagcggtatacacacacccacagccagccc
agccagccagccagccagcacctccttctggtcactccatgacaactgtc
ccacaaactcagaaccacaccccatacaatcctcctagggaggttgttca
actaaaaccaagtcactactaaagcactcaacacaccagactccatctgt
cccaaaataagctatctacaataatgctatctaccctattgctcctagac
taccatttagtacaatgagactagattcctcacaggttttaacacatcac
cacagacaagaggtccccatcctactatgtcatagtataaatatactgca
ggacagcacggtctccagcaacaccttaatacacagcctgttcttcactg
gaacattgttgacagctgttgactgctggaccactaagagcattcattaa
caaataatggatgggcagcagctccctcttagtcgagctacacatacacc
ccactcttactgggaaaatccctgggatgttgttggactttgatgtctca
aatcacatcagccacacaagtctccagcttcctaatgctgtgacccttta
atacagtttctcatgctgtggtgacctccagccacaaaattatttccctt
gctacttcagaactgtaatcttgcaacttttatgaatcatagcataaata
tctgagttttttgatggtcttaggcaactccctatgaaaggactgaccct
tgaaggggacggtgagccacaggttaagaactacttctgcacctggagtt
accacaccgaagaggcagctgggaaagtttataccagtgctgctgatgtc
tgactgttttagattgaccagggacacccaaagggaaacttgagtttcat
caagaaaaatatctaggtatgaaatctgtgatagtatttttttaaacttt
agatacgctgtgcaagcattttctgggctacaaaagagacgtattgtaac
tgaatgatgtattgaaaccacacaggcttagctgagcatatgtgcttgcc
tt
gaattctcacctgaggaataccgaatggcagagaaacacatgaaaaaatc
ttcaacatccttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccacttcactccagtaagaatggctaagatcaaaaactcaggtgacagc
agatgctggcgaggatgtggagaaaggggaacactcctccattgttggtg
ggattgcaagcttgtacaaccactctggaaatcagtcttgcagttcctca
ggaaattggacatagtactaccggaggatcccgcaatacctctcctgggc
atatatccagaagatgtcccaaccgataaaaaggacacatgctccactat
gttcatagcagccttgtttataatagccagaagctggaaagaatccagat
gcccctcaacagaggaatggatacagaaaaatgtggtacatttatacaat
ggaatactactcagctatttaaaaaaatgaatttatgaaattcctagcca
aatggatggacctggagggtatcatcctgagtgaggtaatccaatcacaa
aggaactcgcacaatatgtactcactgataagtggctattagcccagaaa
cttaggatacccaagatataagatacaacttgccaaacgcatgaaattca
agaagaacgaagaccaaagtgtggacactttaccctttcttagaaatggg
aacaaaacacccatggaaggagttacagagacaaaatttggagctgtgac
gaaaggatggaccatctagtgattgccatatgcagggatccatcccataa
tcagcttccaaatgctgacaccattgcatacactagcaagattttgctga
aaggacccagacatagctctctcttgtgagactatgccgggcctagcaaa
cacagaagtggatgatcacagtcagctattggatgggtcacacggcccca
atggaggagctagagaattacccaggaactaaagggactgcaccctatag
tggacacatatgactaaccagtacccggagctcttgctctagctgcaatg
ttttaaagatgctagtcgcatcactgcaagagaggccatggactgcaact
tatatgcccagataggggaattccagctaggggaagtgggtggta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_57278178_57279302
seq2: B6Ng01-095F05.b_49_1150 (reverse)

seq1  AAGGCAAGCACCACTATGCTCAGCTTAAGGCTGTGTGGTTTCAATACATT  50
      |||||||||||   |||||||||| |||| ||||||||||||||||||| 
seq2  AAGGCAAGCAC--ATATGCTCAGC-TAAGCCTGTGTGGTTTCAATACAT-  46

seq1  CAATTCAGGTTTACAAATACCGTCTCTTTTTGGTAGCCCCAGGAAAAATG  100
        ||||||  |||| |||| ||||||||||  |||| |||||  ||||||
seq2  -CATTCAG--TTAC-AATA-CGTCTCTTTT--GTAG-CCCAG--AAAATG  86

seq1  CTTTGCACAGCGTATTCTAAAGTTTAAAAAAAAATACTATTCACAAGATT  150
      | |||||||||||| ||||||||||  |||||||||||| |||| |||||
seq2  C-TTGCACAGCGTA-TCTAAAGTTT--AAAAAAATACTA-TCAC-AGATT  130

seq1  TCAATACCTAGATATTTTTCCTTGATGAAACTCAAGTTTCCCTTTGGGTG  200
      || |||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TC-ATACCTAGATATTTTT-CTTGATGAAACTCAAGTTTCCCTTTGGGTG  178

seq1  TCCCTGGTCAATCTAAAACAGTCAGAACATCAGCAGCACTGGTATAAACT  250
      ||||||||||||||||||||||||| ||||||||||||||||||||||||
seq2  TCCCTGGTCAATCTAAAACAGTCAG-ACATCAGCAGCACTGGTATAAACT  227

seq1  TTCCCAGCTGCCTCTTCGGTGTGGTAACTCCAGGTGCAGAAGTAGTTCTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCAGCTGCCTCTTCGGTGTGGTAACTCCAGGTGCAGAAGTAGTTCTT  277

seq1  AACCTGTGGCTCACCGTCCCCTTCAAGGGTCAGTCCTTTCATAGGGAGTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCTGTGGCTCACCGTCCCCTTCAAGGGTCAGTCCTTTCATAGGGAGTT  327

seq1  GCCTAAGACCATCAAAAAACTCAGATATTTATGCTATGATTCATAAAAGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAAGACCATCAAAAAACTCAGATATTTATGCTATGATTCATAAAAGT  377

seq1  TGCAAGATTACAGTTCTGAAGTAGCAAGGGAAATAATTTTGTGGCTGGAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAAGATTACAGTTCTGAAGTAGCAAGGGAAATAATTTTGTGGCTGGAG  427

seq1  GTCACCACAGCATGAGAAACTGTATTAAAGGGTCACAGCATTAGGAAGCT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACCACAGCATGAGAAACTGTATTAAAGGGTCACAGCATTAGGAAGCT  477

seq1  GGAGACTTGTGTGGCTGATGTGATTTGAGACATCAAAGTCCAACAACATC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGACTTGTGTGGCTGATGTGATTTGAGACATCAAAGTCCAACAACATC  527

seq1  CCAGGGATTTTCCCAGTAAGAGTGGGGTGTATGTGTAGCTCGACTAAGAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGGATTTTCCCAGTAAGAGTGGGGTGTATGTGTAGCTCGACTAAGAG  577

seq1  GGAGCTGCTGCCCATCCATTATTTGTTAATGAATGCTCTTAGTGGTCCAG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCTGCTGCCCATCCATTATTTGTTAATGAATGCTCTTAGTGGTCCAG  627

seq1  CAGTCAACAGCTGTCAACAATGTTCCAGTGAAGAACAGGCTGTGTATTAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGTCAACAGCTGTCAACAATGTTCCAGTGAAGAACAGGCTGTGTATTAA  677

seq1  GGTGTTGCTGGAGACCGTGCTGTCCTGCAGTATATTTATACTATGACATA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTGTTGCTGGAGACCGTGCTGTCCTGCAGTATATTTATACTATGACATA  727

seq1  GTAGGATGGGGACCTCTTGTCTGTGGTGATGTGTTAAAACCTGTGAGGAA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGATGGGGACCTCTTGTCTGTGGTGATGTGTTAAAACCTGTGAGGAA  777

seq1  TCTAGTCTCATTGTACTAAATGGTAGTCTAGGAGCAATAGGGTAGATAGC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGTCTCATTGTACTAAATGGTAGTCTAGGAGCAATAGGGTAGATAGC  827

seq1  ATTATTGTAGATAGCTTATTTTGGGACAGATGGAGTCTGGTGTGTTGAGT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTATTGTAGATAGCTTATTTTGGGACAGATGGAGTCTGGTGTGTTGAGT  877

seq1  GCTTTAGTAGTGACTTGGTTTTAGTTGAACAACCTCCCTAGGAGGATTGT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTAGTAGTGACTTGGTTTTAGTTGAACAACCTCCCTAGGAGGATTGT  927

seq1  ATGGGGTGTGGTTCTGAGTTTGTGGGACAGTTGTCATGGAGTGACCAGAA  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGGTGTGGTTCTGAGTTTGTGGGACAGTTGTCATGGAGTGACCAGAA  977

seq1  GGAGGTGCTGGCTGGCTGGCTGGCTGGGCTGGCTGTGGGTGTGTGTATAC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGGTGCTGGCTGGCTGGCTGGCTGGGCTGGCTGTGGGTGTGTGTATAC  1027

seq1  CGCTGATTGGATAATGGACCTGTGCTTATCTTTGTATTCTGCCAAAGCTG  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCTGATTGGATAATGGACCTGTGCTTATCTTTGTATTCTGCCAAAGCTG  1077

seq1  CAGGCGGTGGTTTGATGGTGAATTC  1125
      |||||||||||||||||||||||||
seq2  CAGGCGGTGGTTTGATGGTGAATTC  1102