BAC Information

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BAC

Clone NameB6Ng01-097E23
Chromosome16 (Build37)
Map Location 72,147,466 - 72,148,439
singlet/doubletsinglet
Overlap genenone
Upstream genenone
Downstream geneRobo1, LOC100039310
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097E23.bB6Ng01-097E23.g
ACCDH907720DH907721
length1,186947
definitionDH907720|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E23, 5' end.DH907721|Mus musculus domesticus DNA, BAC clone: B6Ng01-097E23, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattccagagtggttgtacaagcctgcactcccaccaacaatggaggag
tgttcctctttctccacatccacgccagcatctgctgtcgcctgaatttt
tgatcttagccattctgactggtgtgaggtggaatctcagggttgttttg
atttgcatttccctgatgattaaggatgttgaacattttttcaggtgctt
ctctgccattcggtattcctcaggtgagaattctttgttcagttctgagc
cccattttttaatggggttatttgattttctgaagtccaccttcttgagt
tctttatatatgttggatattagtcccctatctgatttaggataggtaaa
gatcctttcccaatctgttggtggtctttttgtcttattgacggtgtctt
ttgccttgcagaaacttttgagtttcattaggtcccatttgtcaattctc
gatcttacagcacaagccattgctgttctgttcaggaatttttcccctgt
gcccatatcttcaaggcttttccccactttctcctctataagtttcagtg
tctctggttttatgtgaagttccttgatccacttagatttgaccttagta
caaggagataagtatggatcgattcgcattcttctacacgataacaacca
gttgtgccagcaccaattgttgaaaatgctgtctttcttccactggatgg
ttttagctcccttgtcgaagatcaagtgaccataggtgtatgggttcatt
tctgggtctttcatttctattccattggtctactttgtctgtctctatac
cagtaccatgcagttttttatcacaattgctctgtagtaaaactttaggt
ctggcatggtgattccgccagaagttcttttatccttgagaagacttttt
gctatcctaggtttttgtttattccagacaatttgcaaattgctccttct
caattcgttgaagaattgagtggaattttgatagggattgcatgaatctg
tagattgcttttggcaagataagccatttttttcaatgttgatcctggcc
aatccatggagcatgggaagattctttccatctttctgaagtcttcttag
tttcttcttcaggagatttgaggtttttatccatacagatcttccctcat
gattaggagcccacgcccagacacattttatactag
gaattcaaataacttctatttggggaatgtatttaattgtcgttttctaa
ttaattctaatatatcttccttagttaggtatgtatgctgatagcttgct
aaatccaggcataagaatatatacctcttattgctttataaacagttaag
acatttttatttatgtcactattgaaatattgcacttattaacttaaagg
aaagtggaaggaattacttgaattagaaactactcactttcaaagatatg
gatgtttgatctttaaaatcaccccctccccatttgttccctcagagata
tgctaatgattccaggtccagggctttaaaaacataataaagccagaaaa
tcagcaagatctgttcttcacttcatgccacattaatgagggggcatcag
cctaaagatgaggggtcctttcagtagattatctaacctccttatcctga
acccagagctcatagcagaggcagttatcaaaatgactactgctctgcag
ggggccctttgaaaagctaagagcatatttcttttgacagacaaattact
ttgaaataattttgaactctatgatcttgacaaaaatatagtcattttta
gctgtgtggattacattcataggtacccctgtttccttgagtgaagaagc
tgccttaaaataagctcctgtgaccaatatctttgctacatctttaattg
ataagcaacctctctcatttataatgagacagatattatgctggacagta
tgtttgtgtgttttaaactctctgcagctttaagtgttttattgtaaaca
cagactttttatgagtcttgtaacagaatgctttttgtttaatgttttct
tagaaattatacaatatctaatattaaaaaccttgaatttccttaataca
atgtagaactgtaaccaatgttgtgtactatatgcctcgtggtgtgt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_72147466_72148439
seq2: B6Ng01-097E23.g_68_1014 (reverse)

seq1  ACACACACACACACACACACACACACACACACACACACGAGGCATATAGT  50
                                  |||||| |||||||||||||||
seq2  ----------------------------ACACAC-CACGAGGCATATAGT  21

seq1  ACACAACATTGGTTACAGTTCTACATTGTATTAAGGAAATTCAAGGTTTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACAACATTGGTTACAGTTCTACATTGTATTAAGGAAATTCAAGGTTTT  71

seq1  TAATATTAGATATTGTATAATTTCTAAGAAAACATTAA--CAAAAGCATT  148
      ||||||||||||||||||||||||||||||||||||||   |||||||||
seq2  TAATATTAGATATTGTATAATTTCTAAGAAAACATTAAACAAAAAGCATT  121

seq1  CTGTTACAAGACTCATAAAAAGTCTGTGTTTACAATAAAACACTTAAAGC  198
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGTTACAAGACTCATAAAAAGTCTGTGTTTACAATAAAACACTTAAAGC  171

seq1  TGCAGAGAGTTTAAAACACACAAACATACTGTCCAGCATAATATCTGTCT  248
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGAGAGTTTAAAACACACAAACATACTGTCCAGCATAATATCTGTCT  221

seq1  CATTATAAATGAGAGAGGTTGCTTATCAATTAAAGATGTAGCAAAGATAT  298
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTATAAATGAGAGAGGTTGCTTATCAATTAAAGATGTAGCAAAGATAT  271

seq1  TGGTCACAGGAGCTTATTTTAAGGCAGCTTCTTCACTCAAGGAAACAGGG  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTCACAGGAGCTTATTTTAAGGCAGCTTCTTCACTCAAGGAAACAGGG  321

seq1  GTACCTATGAATGTAATCCACACAGCTAAAAATGACTATATTTTTGTCAA  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTACCTATGAATGTAATCCACACAGCTAAAAATGACTATATTTTTGTCAA  371

seq1  GATCATAGAGTTCAAAATTATTTCAAAGTAATTTGTCTGTCAAAAGAAAT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCATAGAGTTCAAAATTATTTCAAAGTAATTTGTCTGTCAAAAGAAAT  421

seq1  ATGCTCTTAGCTTTTCAAAGGGCCCCCTGCAGAGCAGTAGTCATTTTGAT  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCTCTTAGCTTTTCAAAGGGCCCCCTGCAGAGCAGTAGTCATTTTGAT  471

seq1  AACTGCCTCTGCTATGAGCTCTGGGTTCAGGATAAGGAGGTTAGATAATC  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGCCTCTGCTATGAGCTCTGGGTTCAGGATAAGGAGGTTAGATAATC  521

seq1  TACTGAAAGGACCCCTCATCTTTAGGCTGATGCCCCCTCATTAATGTGGC  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAAAGGACCCCTCATCTTTAGGCTGATGCCCCCTCATTAATGTGGC  571

seq1  ATGAAGTGAAGAACAGATCTTGCTGATTTTCTGGCTTTATTATGTTTTTA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAGTGAAGAACAGATCTTGCTGATTTTCTGGCTTTATTATGTTTTTA  621

seq1  AAGCCCTGGACCTGGAATCATTAGCATATCTCTGAGGGAACAAATGGGGA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCCCTGGACCTGGAATCATTAGCATATCTCTGAGGGAACAAATGGGGA  671

seq1  GGGGGTGATTTTAAAGATCAAACATCCATATCTTTGAAAGTGAGTAGTTT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGGGTGATTTTAAAGATCAAACATCCATATCTTTGAAAGTGAGTAGTTT  721

seq1  CTAATTCAAGTAATTCCTTCCACTTTCCTTTAAGTTAATAAGTGCAATAT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATTCAAGTAATTCCTTCCACTTTCCTTTAAGTTAATAAGTGCAATAT  771

seq1  TTCAATAGTGACATAAATAAAAATGTCTTAACTGTTTATAAAGCAATAAG  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCAATAGTGACATAAATAAAAATGTCTTAACTGTTTATAAAGCAATAAG  821

seq1  AGGTATATATTCTTATGCCTGGATTTAGCAAGCTATCAGCATACATACCT  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATATATTCTTATGCCTGGATTTAGCAAGCTATCAGCATACATACCT  871

seq1  AACTAAGGAAGATATATTAGAATTAATTAGAAAACGACAATTAAATACAT  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAGGAAGATATATTAGAATTAATTAGAAAACGACAATTAAATACAT  921

seq1  TCCCCAAATAGAAGTTATTTGAATTC  974
      ||||||||||||||||||||||||||
seq2  TCCCCAAATAGAAGTTATTTGAATTC  947