BAC Information

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BAC

Clone NameB6Ng01-097F04
Chromosome16 (Build37)
Map Location 21,988,543 - 22,154,076
singlet/doubletdoublet
Overlap geneLiph, Senp2, EG239760, Igf2bp2
Upstream geneLOC625123, LOC676915, 2310042E22Rik, Ephb3, 6430590I03Rik, Vps8, 2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a
Downstream geneEG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242, LOC666459, Crygs, Tbccd1, Dnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-097F04.bB6Ng01-097F04.g
ACCDH907730DH907731
length882972
definitionDH907730|Mus musculus domesticus DNA, BAC clone: B6Ng01-097F04, 5' end.DH907731|Mus musculus domesticus DNA, BAC clone: B6Ng01-097F04, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(21,988,543 - 21,989,423)(22,153,111 - 22,154,076)
sequence
gaattcatttacactgaaatagcatatcctgtggaattagaatgaaaatg
gtcccaactggctatttgcatgcttagtccccaattggtgaactatttgg
gaaggtttaggaagtgtgaccttgttggaggaaatgtgtcactggaggtg
ggttttaaggtttcaaaagttcatgcatgccaggtccaatctctctctct
ctttctctctctctctccctccttctctccctccttcccccctttctgtg
cctgctgcctgtggatcaggatataaagctctgagctattgctccaacac
tgcctgtatgcttcttgccatgataatgaactaagctctgaaactgtaag
caagctcccatttcaatgctttcttttataagacttgccttgccatgggg
tgtcttcacagcaatagaacagtgagtaagacacacctctatcccatgga
ggctgtccactcacaagtcacttggtcttaggggttcaccatcaatctgt
ctgaaatagtccctgaactgtgttgggactgatgtttgctctacccagtc
tttctaacccttcctctctcggggcccagccccaaagcatgctgggaggt
cttcctgcccactcttccctccttccctggatccatcaactgtactcctg
tcaatagagctcttgggtttgtggtttcttcgtttggttggttggtttgg
tttgattatttttttattacaccaatgaggcacacaggacatgtgtatca
ttgtgtggaggtaagaaggcacatttagttggctctctcctcccactatg
ggtggaacttctggttaccaggcttggcagcagtgctttaaccactgagc
catctcactatttccttgggtttggatttttg
gaattcacctggtgggcttctccaagctcagcctgttgcaggaggcagtg
ctgtgttttgacttgtttccttggtgggagctgccagtctttcttcctct
gcttcattttctgtgtgaagaaggactttgacccctgctttgagtataaa
tgaaggtatgccatgaatggagtcaagttcttaatgacatactcaggaac
tgagctggtgtgcagtgcccttcatctctgaactgtaatgttctcctgaa
ctcaccatttggtttccttttgttgactctcatggtagtggtggtgggac
agagggtggaattatcgagaaaaaaaaaagtaggtgaagggttaatttct
aacttcttatgcgggtcttcaagttgtacagctcagggcttgatgtggca
ttttctgtgtagttgtgactcagaggatgggacaggaagagagtaactaa
taattacagagtggtagctgcatcttgtgcatttgtggctgtttctttag
taacatgaaactcattttcttctatagagggaggtggtactttttttaaa
attaactttttattgattctttgagagtttcacaatacgtaccccactct
gactcatctcccccccttgcaaacctccccccataaaaaataaacaaaaa
ataagcaaaacaaagcatagaaaacatgtcatcatggacgccatagtatg
tcacagtgtgtccccacagtatagccctctgttcacagcagatgctgttt
gcaatgagtcactagtctggtttgaggtctctggcttctgtgatgctatc
aatattggatcctcacctggtctcttccgggttatcccttttgttgcgtg
cgctgtgtcacggtatattccttcagcaggaccgtcaggacacccttttc
acaggcctccgcccctcttcacagccccaacagtggaggggtactgtttt
tttgtttttggggttttgttgc
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_21988543_21989423
seq2: B6Ng01-097F04.b_47_928

seq1  GAATTCATTTACACTGAAATAGCATATCCTGTGGAATTAGAATGAAAATG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCATTTACACTGAAATAGCATATCCTGTGGAATTAGAATGAAAATG  50

seq1  GTCCCAACTGGCTATTTGCATGCTTAGTCCCCAATTGGTGAACTATTTGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCCCAACTGGCTATTTGCATGCTTAGTCCCCAATTGGTGAACTATTTGG  100

seq1  GAAGGTTTAGGAAGTGTGACCTTGTTGGAGGAAATGTGTCACTGGAGGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGTTTAGGAAGTGTGACCTTGTTGGAGGAAATGTGTCACTGGAGGTG  150

seq1  GGTTTTAAGGTTTCAAAAGTTCATGCATGCCAGGTCCAATCTCTCTCTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTTTTAAGGTTTCAAAAGTTCATGCATGCCAGGTCCAATCTCTCTCTCT  200

seq1  CTTTCTCTCTCTCTCTCCCTCCTTCTCTCCCTCCTTCCCCCCTTTCTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCTCTCTCTCTCCCTCCTTCTCTCCCTCCTTCCCCCCTTTCTGTG  250

seq1  CCTGCTGCCTGTGGATCAGGATATAAAGCTCTGAGCTATTGCTCCAACAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTGCTGCCTGTGGATCAGGATATAAAGCTCTGAGCTATTGCTCCAACAC  300

seq1  TGCCTGTATGCTTCTTGCCATGATAATGAACTAAGCTCTGAAACTGTAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCCTGTATGCTTCTTGCCATGATAATGAACTAAGCTCTGAAACTGTAAG  350

seq1  CAAGCTCCCATTTCAATGCTTTCTTTTATAAGACTTGCCTTGCCATGGGG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGCTCCCATTTCAATGCTTTCTTTTATAAGACTTGCCTTGCCATGGGG  400

seq1  TGTCTTCACAGCAATAGAACAGTGAGTAAGACACACCTCTATCCCATGGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTTCACAGCAATAGAACAGTGAGTAAGACACACCTCTATCCCATGGA  450

seq1  GGCTGTCCACTCACAAGTCACTTGGTCTTAGGGGTTCACCATCAATCTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTGTCCACTCACAAGTCACTTGGTCTTAGGGGTTCACCATCAATCTGT  500

seq1  CTGAAATAGTCCCTGAACTGTGTTGGGACTGATGTTTGCTCTACCCAGTC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAAATAGTCCCTGAACTGTGTTGGGACTGATGTTTGCTCTACCCAGTC  550

seq1  TTTCTAACCCTTCCTCTCTCGGGGCCCAGCCCCAAAGCATGCTGGGAGGT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTAACCCTTCCTCTCTCGGGGCCCAGCCCCAAAGCATGCTGGGAGGT  600

seq1  CTTCCTGCCCACTCTTCCCTCCTTCCCTGGATCCATCAACTGTACTCCTG  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCCTGCCCACTCTTCCCTCCTTCCCTGGATCCATCAACTGTACTCCTG  650

seq1  TCAATAGAGCTCTTGGGTTTGTGGTTTCTTCGTTTGGTTGGTTGGTTTGG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATAGAGCTCTTGGGTTTGTGGTTTCTTCGTTTGGTTGGTTGGTTTGG  700

seq1  TTTGATTATTTTTTAATTACACCAATGAGGCACACAGGACATGTGTATCA  750
      |||||||||||||| |||||||||||||||||||||||||||||||||||
seq2  TTTGATTATTTTTTTATTACACCAATGAGGCACACAGGACATGTGTATCA  750

seq1  TTGTGTGGAGGTAAGAAGGCACA-TTAGTTGGCTCTCTCCTCCCACTAT-  798
      ||||||||||||||||||||||| ||||||||||||||||||||||||| 
seq2  TTGTGTGGAGGTAAGAAGGCACATTTAGTTGGCTCTCTCCTCCCACTATG  800

seq1  GGTGGAAC-TCTGGTTACCAGGCTTGGCAGCAAGTGCTTTTAACCACTGA  847
      |||||||| |||||||||||||||||||||| ||||| ||||||||||||
seq2  GGTGGAACTTCTGGTTACCAGGCTTGGCAGC-AGTGC-TTTAACCACTGA  848

seq1  GCCATCTCACTAGTTCCCTTGGTTTGGATTTTTG  881
      |||||||||||| |||| | ||||||||||||||
seq2  GCCATCTCACTATTTCCTTGGGTTTGGATTTTTG  882

seq1: chr16_22153111_22154076
seq2: B6Ng01-097F04.g_67_1037 (reverse)

seq1  CAACAAAAACCCAAAAAACAAAAAAACAGTACCACCTCCACTGTTGGGGC  50
      |||| ||||||| |||||||||||||||||||| ||||||||||||||||
seq2  CAAC-AAAACCCCAAAAACAAAAAAACAGTACC-CCTCCACTGTTGGGGC  48

seq1  TGTG-AGA-GGGCGG-GGCCTGTGAGAGGGCTGTCCTGACGGTCCTGCTG  97
      |||| ||| |||||| ||||||||| | || |||||||||||||||||||
seq2  TGTGAAGAGGGGCGGAGGCCTGTGAAAAGGGTGTCCTGACGGTCCTGCTG  98

seq1  AAGG-ATATA-CGTGACACAGCGCACGCAAC-AAAGGGATAACCCGGAAG  144
      |||| ||||| |||||||||||||||||||| ||||||||||||||||||
seq2  AAGGAATATACCGTGACACAGCGCACGCAACAAAAGGGATAACCCGGAAG  148

seq1  AGACCAGGTGAGGATCCAATACTGATAGCATCACAGAAGCCAGAGACCTC  194
      ||||||||||||||||||||| ||||||||||||||||||||||||||||
seq2  AGACCAGGTGAGGATCCAATATTGATAGCATCACAGAAGCCAGAGACCTC  198

seq1  AAACCAGACTAGTGACTCATTGC-AACAGCATCTGCTGTGAACAGAGGGC  243
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  AAACCAGACTAGTGACTCATTGCAAACAGCATCTGCTGTGAACAGAGGGC  248

seq1  TATACTGTGGGGACACACTGTGACATACTATGGCGTCCATGATGACATGT  293
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATACTGTGGGGACACACTGTGACATACTATGGCGTCCATGATGACATGT  298

seq1  TTTCTATGCTTTGTTTTGCTTATTTTTTGTTTATTTTTTATGGGGGGAGG  343
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTATGCTTTGTTTTGCTTATTTTTTGTTTATTTTTTATGGGGGGAGG  348

seq1  TTTGCAAGGGGGGGAGATGAGTCAGAGTGGGGTACGTATTGTGAAACTCT  393
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCAAGGGGGGGAGATGAGTCAGAGTGGGGTACGTATTGTGAAACTCT  398

seq1  CAAAGAATCAATAAAAAGTTAATTTTAAAAAAAGTACCACCTCCCTCTAT  443
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGAATCAATAAAAAGTTAATTTTAAAAAAAGTACCACCTCCCTCTAT  448

seq1  AGAAGAAAATGAGTTTCATGTTACTAAAGAAACAGCCACAAATGCACAAG  493
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAGAAAATGAGTTTCATGTTACTAAAGAAACAGCCACAAATGCACAAG  498

seq1  ATGCAGCTACCACTCTGTAATTATTAGTTACTCTCTTCCTGTCCCATCCT  543
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGCTACCACTCTGTAATTATTAGTTACTCTCTTCCTGTCCCATCCT  548

seq1  CTGAGTCACAACTACACAGAAAATGCCACATCAAGCCCTGAGCTGTACAA  593
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGAGTCACAACTACACAGAAAATGCCACATCAAGCCCTGAGCTGTACAA  598

seq1  CTTGAAGACCCGCATAAGAAGTTAGAAATTAACCCTTCACCTACTTTTTT  643
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGAAGACCCGCATAAGAAGTTAGAAATTAACCCTTCACCTACTTTTTT  648

seq1  TTTTCTCGATAATTCCACCCTCTGTCCCACCACCACTACCATGAGAGTCA  693
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTCGATAATTCCACCCTCTGTCCCACCACCACTACCATGAGAGTCA  698

seq1  ACAAAAGGAAACCAAATGGTGAGTTCAGGAGAACATTACAGTTCAGAGAT  743
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAAAGGAAACCAAATGGTGAGTTCAGGAGAACATTACAGTTCAGAGAT  748

seq1  GAAGGGCACTGCACACCAGCTCAGTTCCTGAGTATGTCATTAAGAACTTG  793
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGGGCACTGCACACCAGCTCAGTTCCTGAGTATGTCATTAAGAACTTG  798

seq1  ACTCCATTCATGGCATACCTTCATTTATACTCAAAGCAGGGGTCAAAGTC  843
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCCATTCATGGCATACCTTCATTTATACTCAAAGCAGGGGTCAAAGTC  848

seq1  CTTCTTCACACAGAAAATGAAGCAGAGGAAGAAAGACTGGCAGCTCCCAC  893
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTCTTCACACAGAAAATGAAGCAGAGGAAGAAAGACTGGCAGCTCCCAC  898

seq1  CAAGGAAACAAGTCAAAACACAGCACTGCCTCCTGCAACAGGCTGAGCTT  943
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGGAAACAAGTCAAAACACAGCACTGCCTCCTGCAACAGGCTGAGCTT  948

seq1  GGAGAAGCCCACCAGGTGAATTC  966
      |||||||||||||||||||||||
seq2  GGAGAAGCCCACCAGGTGAATTC  971