BAC Information

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BAC

Clone NameB6Ng01-101L11
Chromosome16 (Build37)
Map Location 80,366,011 - 80,367,183
singlet/doubletsinglet
Overlap genenone
Upstream geneEG383172, 1700066C05Rik
Downstream geneLOC621365, LOC100039724, Ncam2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-101L11.bB6Ng01-101L11.g
ACCDH910813DH910814
length1,1501,165
definitionDH910813|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L11, 5' end.DH910814|Mus musculus domesticus DNA, BAC clone: B6Ng01-101L11, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcttgtttctccaattgcaagaagcctcagtcagacgccaaggtga
gtgagtgcatctttgcttctatggtttgtaagtgataatttcccatgtct
ttctgtcccaggtgatgttgtattttgtctgccttctgtcttgcttcaca
tcgaatttcctgggtgtattgctgtctaataattctctctaaattgatgt
aatttcctttggccaagactactgagcaaggaaggaagaataaccagtgt
aagggtctagagagatggcttgatgcacaaatgcttaggaggctgtgatt
ccagaagacctcagttcagttatcagcagcatgttgggatgttaacaggt
acttaaaatttcaatctccttctgccctctgcaggtaccaaacacatgag
aaaagtgtacacccaaattagggataaagcaatgtttaaaagaataactg
agttgattctcactggagagcatgattagctatttttatttataggggtg
gctgcgtcttttccttacttttcattttgtttgtatctccaatgtcacct
gggcccgtggattcctttcactagcctgcctctgttgagtatcgtctcat
ttttatcattgtttacatattaatttaattaattgtttattaatttcaga
ttatatatgaagagttggtaggtcaattctccacatactcagtggtgatt
tgtgattggagacataccagtgattctaataaggataaccaagcaagcgt
gtgagtatggctttccagctgtgtctgactggggtcaagctatcctacct
gaggcctaagactctgtgggcaggaatgcgaaaagggagatttggcagca
gactgggtttctgtataggttatctcatgtaacccacgtcagttttctgg
gaatgtgtgactgacgtgggtacaggctgggatgtagaagagtctcctgt
cagtgatgatgtacagttgcttcacacctgtgcctcaaagttggtggaaa
ccatagcagacaggatttctcatgtactaatatttgtttagggagtataa
ttaaataagaaccattaatttcagttaaatattcatgctcatatttattt
cttatgattccttcagaatttgttaccatttcttgatctcttggttagat

gaattccccttaaagagatagccccgctggccatctatcccttgctccag
ggaagatgagcggggatgagagccctgggatgtatgcttgttatagtgtg
tgtgtgttttgtgtttggcacatgtgttaggtgcagtgtgcggcccgcac
tttcgccatggtagcataggcttttgctgcagaggaggcgggacaatctc
ctcagattcggtttgctgctctaaaagaaattatgctgcgttatgccgtg
gggtgcgaggctaagcactgcacagaggatagcttgctgttggcatcctg
tggaaggcacgtctgattgcatgaaggttcagtgtcctagttcccttccc
ccaggaaaaacgacacaggagctggccaagacctctctgggtgatgagcc
taagggatggttttgtgtagggcccctatgcttgcacactggggatcaga
cctctaccttcacctatgaggcttgcttgcagcaattaagatctggccat
aggttaattaacatcctggccttttgatgcacctgccgcaagcaaaacac
aatctccccaggagtggcttggcatgattgagaggtagtcagtgataaga
ctccctgggcatgtcaccaacctaagacagggctcaaaccaatgctgttt
gtctcccaaagacaggtaagggtcatggttgcgaggggctatctacagac
attctctctgccaagaaagaaaaaagggggaattgtggggagcggggtgt
ggcggcagtcccaaaggtgccagggactgtagctaagtcatatgacttgc
acctgacttcctcatataagacacaaacatcttgagtgctgcgcagtgta
ccaggatacaggtgaatctatttggtggagatttcccctgctgccctgat
tagctgaagcctcgtgactggcgaggggcatggcctgcagtgcgtggatg
agagagagtataaaggagtgagagcccaggttcgggggagatttaaccaa
gaagatcaggactgaataaactgctgttagaagactgttgtccgttgtct
tgctggccgaagcgggagcgacatactatgtccctcttgaaaaacagcta
gtcttaaggccagccatatctaggcgtggaatttagattttacctgtggc
acaccctttctcgga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_80366011_80367183
seq2: B6Ng01-101L11.b_47_1196 (reverse)

seq1  ATCTAACCAAGAGAAATC-AGAAATTGTTTAACAATATCCTGAAGGGAAA  49
      |||||||||||||  ||| |||||| |  |||||| || |||||||  ||
seq2  ATCTAACCAAGAG--ATCAAGAAATGG--TAACAA-ATTCTGAAGG--AA  43

seq1  TCATAAGAAATAAAATTATGAAGGCATGAATTAATTTTAACTGAAATTTT  99
      ||||||||||||||  |||||  ||||||||    |||||||||||||  
seq2  TCATAAGAAATAAA--TATGA--GCATGAAT---ATTTAACTGAAATT--  84

seq1  AATTGGTTCTTTATTTAATTTAATACTACACTTAAACAAATATTTAGTAC  149
       | |||||| ||||||||||  |||||   | |||||||||| |||||||
seq2  -AATGGTTC-TTATTTAATT--ATACT--CCCTAAACAAATA-TTAGTAC  127

seq1  ATGAGAAATACCTGTCTGCTATGGTTTCCCCAAACTCTGAGGCACAGGTG  199
      ||||||||| ||||||||||||||||||| | |||| |||||||||||||
seq2  ATGAGAAAT-CCTGTCTGCTATGGTTTCCACCAACTTTGAGGCACAGGTG  176

seq1  TGAAGCAACCTGTACATCATCCCTGACAGGAGACTCTTCTACATCCCAGC  249
      |||||||| |||||||||||| ||||||||||||||||||||||||||||
seq2  TGAAGCAA-CTGTACATCATCACTGACAGGAGACTCTTCTACATCCCAGC  225

seq1  CTGTA-CCACGTCAGTCACACATTCCCAGAAAACCTGACGTGGGTTACAT  298
      ||||| ||||||||||||||||||||||||||| ||||||||||||||||
seq2  CTGTACCCACGTCAGTCACACATTCCCAGAAAA-CTGACGTGGGTTACAT  274

seq1  GAGATAACCTATACAGAAACCCAGTCTGCTGCCAAATCTCCCTTTTCGCA  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAACCTATACAGAAACCCAGTCTGCTGCCAAATCTCCCTTTTCGCA  324

seq1  TTCCTGCCCACAGAGTCTTAGGCCTCAGGTAGGATAGCTTGACCCCAGTC  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTGCCCACAGAGTCTTAGGCCTCAGGTAGGATAGCTTGACCCCAGTC  374

seq1  AGACACAGCTGG-AAGCCATACTCACACGCTTGCTTGGTTATCCTTATTA  447
      |||||||||||| |||||||||||||||||||||||||||||||||||||
seq2  AGACACAGCTGGAAAGCCATACTCACACGCTTGCTTGGTTATCCTTATTA  424

seq1  GAATCACTGGTATGTCTCCAATCACAAATCACCACTGAGTATGTGGAGAA  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATCACTGGTATGTCTCCAATCACAAATCACCACTGAGTATGTGGAGAA  474

seq1  TTGACCTACCAACTCTTCATATATAATCTGAAATTAATAAACAATTAATT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGACCTACCAACTCTTCATATATAATCTGAAATTAATAAACAATTAATT  524

seq1  AAATTAATATGTAAACAATGATAAAAATGAGACGATACTCAACAGAGGCA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTAATATGTAAACAATGATAAAAATGAGACGATACTCAACAGAGGCA  574

seq1  GGCTAGTGAAAGGAATCCACGGGCCCAGGTGACATTGGAGATACAAACAA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTAGTGAAAGGAATCCACGGGCCCAGGTGACATTGGAGATACAAACAA  624

seq1  AATGAAAAGTAAGGAAAAGACGCAGCCACCCCTATAAATAAAAATAGCTA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAAAAGTAAGGAAAAGACGCAGCCACCCCTATAAATAAAAATAGCTA  674

seq1  ATCATGCTCTCCAGTGAGAATCAACTCAGTTATTCTTTTAAACATTGCTT  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATGCTCTCCAGTGAGAATCAACTCAGTTATTCTTTTAAACATTGCTT  724

seq1  TATCCCTAATTTGGGTGTACACTTTTCTCATGTGTTTGGTACCTGCAGAG  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCCCTAATTTGGGTGTACACTTTTCTCATGTGTTTGGTACCTGCAGAG  774

seq1  GGCAGAAGGAGATTGAAATTTTAAGTACCTGTTAACATCCCAACATGCTG  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCAGAAGGAGATTGAAATTTTAAGTACCTGTTAACATCCCAACATGCTG  824

seq1  CTGATAACTGAACTGAGGTCTTCTGGAATCACAGCCTCCTAAGCATTTGT  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGATAACTGAACTGAGGTCTTCTGGAATCACAGCCTCCTAAGCATTTGT  874

seq1  GCATCAAGCCATCTCTCTAGACCCTTACACTGGTTATTCTTCCTTCCTTG  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATCAAGCCATCTCTCTAGACCCTTACACTGGTTATTCTTCCTTCCTTG  924

seq1  CTCAGTAGTCTTGGCCAAAGGAAATTACATCAATTTAGAGAGAATTATTA  997
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAGTAGTCTTGGCCAAAGGAAATTACATCAATTTAGAGAGAATTATTA  974

seq1  GACAGCAATACACCCAGGAAATTCGATGTGAAGCAAGACAGAAGGCAGAC  1047
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACAGCAATACACCCAGGAAATTCGATGTGAAGCAAGACAGAAGGCAGAC  1024

seq1  AAAATACAACATCACCTGGGACAGAAAGACATGGGAAATTATCACTTACA  1097
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATACAACATCACCTGGGACAGAAAGACATGGGAAATTATCACTTACA  1074

seq1  AACCATAGAAGCAAAGATGCACTCACTCACCTTGGCGTCTGACTGAGGCT  1147
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCATAGAAGCAAAGATGCACTCACTCACCTTGGCGTCTGACTGAGGCT  1124

seq1  TCTTGCAATTGGAGAAACAAGAATTC  1173
      ||||||||||||||||||||||||||
seq2  TCTTGCAATTGGAGAAACAAGAATTC  1150