BAC Information

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BAC

Clone NameB6Ng01-102O06
Chromosome16 (Build37)
Map Location 69,034,616 - 69,035,749
singlet/doubletsinglet
Overlap genenone
Upstream geneEG626609
Downstream geneSpeer2
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-102O06.bB6Ng01-102O06.g
ACCDH911649DH911650
length1,1761,118
definitionDH911649|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O06, 5' end.DH911650|Mus musculus domesticus DNA, BAC clone: B6Ng01-102O06, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcacctgaggaatactgaaaggctgagaaacacctgaaaaaatg
ttcaacatctttaatcatcagggaaatgcaaatcaaaacaaccctgagat
tccatctcacaccagtcagaatggctaagatcaaaaattcaggtgacagc
agatgctggcgaggatgtggagaaagaggaacactcctccattgttggtg
ggattgcaagcttgtacaaccacttggaaatcagtctggcggttcctcga
aaaattggtcatagtactaccggaggatcctgcaatacctctcctgggga
tatatccagaagatgtcccaaccggtaagaaggacacattctccactatg
ttcatagcagccttatttataatagccagaagctggaaagaacccaaatg
tccctcaacagaggaatggatacaaaaaatgtggtacatttacacaatgg
agtactactcagctattaaaaagaatgaattcatgaaattcctaggcaaa
tggttggacctgaagggcatcatcctgagtgaggtaacccaatcacaaaa
gaactcaaatgaaatgtactcactgataagtggatattaacccagaaact
tagtatagcgagatataaggtacaatatgtaaaacgtatgaaactgaaga
agaacgaagaccaaagtgtggacactttgctcattcttataattggaaac
aatcacccatggaaggagttacagagacaaagtttggagttgagacaaaa
ggatggtccatctagagactgccatatccagggatccatcccataattag
cctccaagctatgacaccattgcatacactagcaagcctttgttgcaagg
atggtgatatagctgtctcttgtgagactaggccggggcctagcaaacac
agaagtggatgctcacagtcaactatggatggatcacttgggccccaatg
ggaggagctagagaagtaatccaaggagctaaagagatctgcaaccatat
tcagaggacaactttatgaactaaccagtaccccagagctcttgactcta
gctgcaatatgtatcaaaatgatctagtcggcattcattggaaagaaagc
ccattggtcaggcaacgtatatgcccagtacatggaatgtcaagggccct
aatatgggaatggtggggtaggggtg
gaattcagagtgctgcagcctatttcccttcttttatcacaaatctcatg
aacacaaacggtgaaaggcaatgtctttattagcacttcatcccctaatg
ccttgcatgtggtccctatttctatgactaccttggggaagcttttgctt
caattactaatgaattcttcatcaatacagtcaatcccctgttttgtttt
caccatccttaatcctcctgcagaatttggcactgttaaatacacccttt
tgaaaaatcttcccttttactttagcaaatttaatctcagtgtttctttg
tgtttttctcacttttaatgcagcttattttctcctgcttccttgtaaaa
atagattttcaaaagactcttatttgatatttggtaattattacactata
aatcctaaagaataatcttatttcttataaagatttaaattagtatcaac
gcagagacgtacagttcactgaaaatattatatggctgtatttgttcatt
ttcattcttctgagcaattgtttaaaacagataaaattagaatattcaat
gtaatgatgtagttagcatcactgtgaaagtcatatatatatttctaggt
ataaattgcccatttcttctttccttaaaatcagagctaacgttaatagc
atattttatttaaaattgttttcttgtaatacctacctcactttctgatt
tcactttcttggctttatgaaataaattatatattaaattaatatttcta
gttttgagcttaaagaagacagtaattacagtaataagtagtcaccattt
catgcctaatagatgttgatatatccatgggaaattttcaggtaaataaa
tgcagaaaataagtactttgatgggctagtactcatgatttttaagaaga
aaatcataagcagaagatatgaaaaatgaattttcacataaaattcttaa
tacataactgtaatttgacccttcacctatttagagtacagtttgtgcag
aagtcttgaaattgttgtgttctaatctgttttaagaagaaattaaaagc
agtgatgtcagagctgggaagaattcagagcatgttctgattctaatcat
tagcattgacgatgctaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_69034616_69035749
seq2: B6Ng01-102O06.g_68_1185 (reverse)

seq1  TTAGCATTTCGTCAAAATGCTAAATGATTTAGAAATCAGAACATGCTCTG  50
      ||||||  |||||  |||||| ||||| |||| |||||||||||||||||
seq2  TTAGCA--TCGTC--AATGCT-AATGA-TTAG-AATCAGAACATGCTCTG  43

seq1  AA-TCTTCCCAAGCTCCCTGACATCAACTGCTTTTAATTTTCTTCTTAAA  99
      || ||||||| ||||  |||||||| ||||||||||| ||||||||||||
seq2  AATTCTTCCC-AGCT--CTGACATC-ACTGCTTTTAA-TTTCTTCTTAAA  88

seq1  ATACAGATAAGAACACAACAATTTCAAGACTTCTGCACAAACTTGTACTT  149
        |||||| ||||||||||||||||||||||||||||||||| ||||| |
seq2  --ACAGATTAGAACACAACAATTTCAAGACTTCTGCACAAAC-TGTAC-T  134

seq1  CTAAAATAGGTGAAGGGTCAAATTACAGTTATGTATTAAGAATTTTATGT  199
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  CT-AAATAGGTGAAGGGTCAAATTACAGTTATGTATTAAGAATTTTATGT  183

seq1  GAAAAATTCCTTTTTCATATCTTCTGCTTATGATTTTCTTCTTAAAAATC  249
      | ||||||| ||||||||||||||||||||||||||||||||||||||||
seq2  G-AAAATTCATTTTTCATATCTTCTGCTTATGATTTTCTTCTTAAAAATC  232

seq1  ATGAGTACTAGCCCATC-AAGTACTTATTTTCTGCATTTATTTACCTGAA  298
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  ATGAGTACTAGCCCATCAAAGTACTTATTTTCTGCATTTATTTACCTGAA  282

seq1  AATTTCCCATGGATATATCAACATCTATTAGGCATGAAATGGTGACTACT  348
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCCCATGGATATATCAACATCTATTAGGCATGAAATGGTGACTACT  332

seq1  TATTACTGTAATTACTGTCTTCTTTAAGCTCAAAACTAGAAATATTAATT  398
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATTACTGTAATTACTGTCTTCTTTAAGCTCAAAACTAGAAATATTAATT  382

seq1  TAATATATAATTTATTTCATAAAGCCAAGAAAGTGAAATCAGAAAGTGAG  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAATATATAATTTATTTCATAAAGCCAAGAAAGTGAAATCAGAAAGTGAG  432

seq1  GTAGGTATTACAAGAAAACAATTTTAAATAAAATATGCTATTAACGTTAG  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGGTATTACAAGAAAACAATTTTAAATAAAATATGCTATTAACGTTAG  482

seq1  CTCTGATTTTAAGGAAAGAAGAAATGGGCAATTTATACCTAGAAATATAT  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTGATTTTAAGGAAAGAAGAAATGGGCAATTTATACCTAGAAATATAT  532

seq1  ATATGACTTTCACAGTGATGCTAACTACATCATTACATTGAATATTCTAA  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGACTTTCACAGTGATGCTAACTACATCATTACATTGAATATTCTAA  582

seq1  TTTTATCTGTTTTAAACAATTGCTCAGAAGAATGAAAATGAACAAATACA  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATCTGTTTTAAACAATTGCTCAGAAGAATGAAAATGAACAAATACA  632

seq1  GCCATATAATATTTTCAGTGAACTGTACGTCTCTGCGTTGATACTAATTT  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCATATAATATTTTCAGTGAACTGTACGTCTCTGCGTTGATACTAATTT  682

seq1  AAATCTTTATAAGAAATAAGATTATTCTTTAGGATTTATAGTGTAATAAT  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATCTTTATAAGAAATAAGATTATTCTTTAGGATTTATAGTGTAATAAT  732

seq1  TACCAAATATCAAATAAGAGTCTTTTGAAAATCTATTTTTACAAGGAAGC  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCAAATATCAAATAAGAGTCTTTTGAAAATCTATTTTTACAAGGAAGC  782

seq1  AGGAGAAAATAAGCTGCATTAAAAGTGAGAAAAACACAAAGAAACACTGA  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAGAAAATAAGCTGCATTAAAAGTGAGAAAAACACAAAGAAACACTGA  832

seq1  GATTAAATTTGCTAAAGTAAAAGGGAAGATTTTTCAAAAGGGTGTATTTA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTAAATTTGCTAAAGTAAAAGGGAAGATTTTTCAAAAGGGTGTATTTA  882

seq1  ACAGTGCCAAATTCTGCAGGAGGATTAAGGATGGTGAAAACAAAACAGGG  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGTGCCAAATTCTGCAGGAGGATTAAGGATGGTGAAAACAAAACAGGG  932

seq1  GATTGACTGTATTGATGAAGAATTCATTAGTAATTGAAGCAAAAGCTTCC  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTGACTGTATTGATGAAGAATTCATTAGTAATTGAAGCAAAAGCTTCC  982

seq1  CCAAGGTAGTCATAGAAATAGGGACCACATGCAAGGCATTAGGGGATGAA  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGGTAGTCATAGAAATAGGGACCACATGCAAGGCATTAGGGGATGAA  1032

seq1  GTGCTAATAAAGACATTGCCTTTCACCGTTTGTGTTCATGAGATTTGTGA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTAATAAAGACATTGCCTTTCACCGTTTGTGTTCATGAGATTTGTGA  1082

seq1  TAAAAGAAGGGAAATAGGCTGCAGCACTCTGAATTC  1134
      ||||||||||||||||||||||||||||||||||||
seq2  TAAAAGAAGGGAAATAGGCTGCAGCACTCTGAATTC  1118