BAC Information

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BAC

Clone NameB6Ng01-108B01
Chromosome16 (Build37)
Map Location 8,568,739 - 8,710,755
singlet/doubletdoublet
Overlap geneAbat, LOC665207, Tmem186, Pmm2, Carhsp1, EG436336, Usp7
Upstream gene4930511J11Rik, BC024814
Downstream geneLOC665231, 1810013L24Rik, LOC100043106, Grin2a
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-108B01.bB6Ng01-108B01.g
ACCDH915348DH915349
length1981,108
definitionDH915348|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B01, 5' end.DH915349|Mus musculus domesticus DNA, BAC clone: B6Ng01-108B01, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(8,568,739 - 8,568,936)(8,709,643 - 8,710,755)
sequence
gaattcttctcaccttgttgatcaaaacattgaactcccggctggtccta
ctccagctcgattctcccattgcacagggcagataagaagaagcacggga
accaattagcattttaattaaggtgggcaggactgaggcattagctatct
gaatagactctggaattactgcagaggggaagaggggggggattagga

gaattcacagtaatccccttgcctcaacttcctcagtggtagagactgtg
tgtgctaccatttcttgctcatccactgttttattattgtatctgctgtc
acagggatttctctgtacatgacatgcaaccacccctcacctagccacag
tgcataaaacctaaggctgatgtgccacacctaaggttggtgtggctttc
aggcaggaacaaaacccaagccaggtcatggtatgcaccataatcttagc
tctcagaaggcagagaggcaggtagatctgagttctagtccagctagagt
tacatggcgagatcctgtcctcaaataataaactagaactgtgagctact
gcagttgtgacttcaaatccttctatcctagccagggtagattttcatgt
gctggttctggtgttttaaaaatgtgtgggtctcggttaaatatgccagt
taaggtttggtgggttttgtttccttctgcaataggtcgtggtcctgcca
cgcacaagcagtgctgaagataataaattacagggatgatgacaaatcat
tcagccggcgaatcagccacttgttcttccacaaggaaaacgactgggga
ttctctaatttcatggcctggagtgtaagtgacagtgtttagactcaata
tctcaactggtattggtggtcttgttctttttagtcttcaaaaaccttgc
tttgtgagttgagcaggtagacacctggaagttggtgtggctttctggca
ttatatgttcagtatatataaagattcccgttgcagcctttaaattttta
cttactatgctgtgtgtacatggtgtgcagctttattatatgcaaataac
tgagtgtgggcatacatgaactaaggtgtggtccatttgtgtggggtctg
tggattcagctcaaatcatggatttaggcttagatgacaaagtacctgct
gtctgtgtcatctcactggcttctcaggcatggctctgcccttctgaccg
gttctctgtggccctgggtataattggaactcaactaagtagaccaggct
gcctctgcctcagcatccttaatgctcaagtgctggaaataagtagacaa
gctggcct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_8568739_8568936
seq2: B6Ng01-108B01.b_42_239

seq1  GAATTCTTCTCACCTTGTTGATCAAAACATTGAACTCCCGGCTGGTCCTA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTCACCTTGTTGATCAAAACATTGAACTCCCGGCTGGTCCTA  50

seq1  CTCCAGCTCGATTCTCCCATTGCACAGGGCAGATAAGAAGAAGCACGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGCTCGATTCTCCCATTGCACAGGGCAGATAAGAAGAAGCACGGGA  100

seq1  ACCAATTAGCATTTTAATTAAGGTGGGCAGGACTGAGGCATTAGCTATCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCAATTAGCATTTTAATTAAGGTGGGCAGGACTGAGGCATTAGCTATCT  150

seq1  GAATAGACTCTGGAATTACTGCAGAGGGGAAGAGGGGGGGGATTAGGA  198
      ||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATAGACTCTGGAATTACTGCAGAGGGGAAGAGGGGGGGGATTAGGA  198


seq1: chr16_8709643_8710755
seq2: B6Ng01-108B01.g_64_1171 (reverse)

seq1  AGGCCAGCCTGGTCTACTTATTTCCAGCACTTGAGCACTAAGGATGTGGA  50
      ||||||| || |||||||||||||||||||||||||| ||||||||  ||
seq2  AGGCCAG-CTTGTCTACTTATTTCCAGCACTTGAGCATTAAGGATGCTGA  49

seq1  GGCAGAGGCCAGCCTGGTCTACTTAG-TGAGTTCCAATATTAACCAGGGC  99
      |||||||| ||||||||||||||||| |||||||||||  || |||||||
seq2  GGCAGAGG-CAGCCTGGTCTACTTAGTTGAGTTCCAATTATACCCAGGGC  98

seq1  CACAGAGAAACCCGGTCAGGAAGGGCAGAGCCATGCCTGAGGAGCCAGTG  149
      |||||||||  ||||||| |||||||||||||||||||||| ||||||||
seq2  CACAGAGAA--CCGGTCA-GAAGGGCAGAGCCATGCCTGAGAAGCCAGTG  145

seq1  AGATGACACAGACAGCAGGTACTTTGTCATCTAAGCCTAAATCCATGATT  199
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATGACACAGACAGCAGGTACTTTGTCATCTAAGCCTAAATCCATGATT  195

seq1  TGAGCTGAATCCACAGAACCCACACAAATGGACCACACCTTAGTTCATGT  249
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  TGAGCTGAATCCACAGACCCCACACAAATGGACCACACCTTAGTTCATGT  245

seq1  ATGCCCACACTCAGTTATTTGCATATAATAAAGCTTGCACACCATGTACA  299
      |||||||||||||||||||||||||||||||||| |||||||||||||||
seq2  ATGCCCACACTCAGTTATTTGCATATAATAAAGC-TGCACACCATGTACA  294

seq1  CACAGCATAGTAAGTAAAAATTTAAAGGCTGCAACGGGAATCTTTATATA  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACAGCATAGTAAGTAAAAATTTAAAGGCTGCAACGGGAATCTTTATATA  344

seq1  TACTGAACATATAATGCCAGAAAGCCACACCAACTTCCAGGTGTCTACCT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTGAACATATAATGCCAGAAAGCCACACCAACTTCCAGGTGTCTACCT  394

seq1  GCTCAACTCACAAAGCAAGGTTTTTGAAGACTAAAAAGAACAAGACCACC  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTCAACTCACAAAGCAAGGTTTTTGAAGACTAAAAAGAACAAGACCACC  444

seq1  AATACCAGTTGAGATATTGAGTCTAAACACTGTCACTTACACTCCAGGCC  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATACCAGTTGAGATATTGAGTCTAAACACTGTCACTTACACTCCAGGCC  494

seq1  ATGAAATTAGAGAATCCCCAGTCGTTTTCCTTGTGGAAGAACAAGTGGCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAATTAGAGAATCCCCAGTCGTTTTCCTTGTGGAAGAACAAGTGGCT  544

seq1  GATTCGCCGGCTGAATGATTTGTCATCATCCCTGTAATTTATTATCTTCA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATTCGCCGGCTGAATGATTTGTCATCATCCCTGTAATTTATTATCTTCA  594

seq1  GCACTGCTTGTGCGTGGCAGGACCACGACCTATTGCAGAAGGAAACAAAA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCACTGCTTGTGCGTGGCAGGACCACGACCTATTGCAGAAGGAAACAAAA  644

seq1  CCCACCAAACCTTAACTGGCATATTTAACCGAGACCCACACATTTTTAAA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCACCAAACCTTAACTGGCATATTTAACCGAGACCCACACATTTTTAAA  694

seq1  ACACCAGAACCAGCACATGAAAATCTACCCTGGCTAGGATAGAAGGATTT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACCAGAACCAGCACATGAAAATCTACCCTGGCTAGGATAGAAGGATTT  744

seq1  GAAGTCACAACTGCAGTAGCTCACAGTTCTAGTTTATTATTTGAGGACAG  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGTCACAACTGCAGTAGCTCACAGTTCTAGTTTATTATTTGAGGACAG  794

seq1  GATCTCGCCATGTAACTCTAGCTGGACTAGAACTCAGATCTACCTGCCTC  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATCTCGCCATGTAACTCTAGCTGGACTAGAACTCAGATCTACCTGCCTC  844

seq1  TCTGCCTTCTGAGAGCTAAGATTATGGTGCATACCATGACCTGGCTTGGG  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGCCTTCTGAGAGCTAAGATTATGGTGCATACCATGACCTGGCTTGGG  894

seq1  TTTTGTTCCTGCCTGAAAGCCACACCAACCTTAGGTGTGGCACATCAGCC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGTTCCTGCCTGAAAGCCACACCAACCTTAGGTGTGGCACATCAGCC  944

seq1  TTAGGTTTTATGCACTGTGGCTAGGTGAGGGGTGGTTGCATGTCATGTAC  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAGGTTTTATGCACTGTGGCTAGGTGAGGGGTGGTTGCATGTCATGTAC  994

seq1  AGAGAAATCCCTGTGACAGCAGATACAATAATAAAACAGTGGATGAGCAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAGAAATCCCTGTGACAGCAGATACAATAATAAAACAGTGGATGAGCAA  1044

seq1  GAAATGGTAGCACACACAGTCTCTACCACTGAGGAAGTTGAGGCAAGGGG  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAATGGTAGCACACACAGTCTCTACCACTGAGGAAGTTGAGGCAAGGGG  1094

seq1  ATTACTGTGAATTC  1113
      ||||||||||||||
seq2  ATTACTGTGAATTC  1108


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