BAC Information

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BAC

Clone NameB6Ng01-109B02
Chromosome16 (Build37)
Map Location 22,647,548 - 22,824,553
singlet/doubletdoublet
Overlap geneLOC666459, Crygs, Tbccd1
Upstream gene2510009E07Rik, Ehhadh, LOC100043489, LOC546659, Map3k13, LOC624037, Tmem41a, Liph, Senp2, EG239760, Igf2bp2, EG545152, EG666421, Sfrs10, LOC100043507, Etv5, Dgkg, LOC671242
Downstream geneDnajb11, Ahsg, Fetub, Hrg, Kng2, LOC624311, LOC666486, LOC666489, Kng1, LOC666493, Eif4a2, Rfc4, Adipoq, LOC100043541, EG625835, BC106179, St6gal1, Rtp1, Masp1, LOC100043018, Rtp4, EG625969
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-109B02.bB6Ng01-109B02.g
ACCDH916080DH916081
length1,164946
definitionDH916080|Mus musculus domesticus DNA, BAC clone: B6Ng01-109B02, 5' end.DH916081|Mus musculus domesticus DNA, BAC clone: B6Ng01-109B02, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(22,823,372 - 22,824,553)(22,647,548 - 22,648,494)
sequence
gaattctagaacagcctggtctacatattgagaccctgtctcaactccct
tttcccccagaaagttgaatcttttttcaggatttttttagaacatgcta
agggattgaacttggggcttcacgcatcctaagcattcgttctaccattg
agcaatgcctccagaaagaatgacatctttttttcatatttttataacac
tgtaaaacagaatgattgcacattagctacaaagtctggggtttgtttgt
ttgtttgtttgttttttaagtgatccaggaagtctatatccaacccagct
attctgccatgaatcagagtctccttgagattcagggatcctatagacat
gtaggtgaaactgtgtaatccttagctttataaaaaacacataggcttaa
gggagctttacccttgatagggaaggcactatgggacaattaagactatc
taatctcatatgactatattaaaattctagtagttttataataaaccaat
atttaaactttttaatgttatttttctacataaccatgttttatgcatat
ggttatgtgcaattgaaaactaataagtctcttaaaagaagaattttagc
atatctgtatatcctttccacactggaccgggtttgattgtctgcgtggc
tagtgggaagtgcagacagagcagtaagactcatggtaacatggctgtct
cggtggggaccctgtgtagaggtgcagtcccagtaagaatgatcttggga
gaggagatgtgaactcaagtgggagtcctgggatgatgctgttagttgat
atactgggccagttttgtgtcaacttgacacaggctggagttatcacaga
gaaaggagcttcaattggggaaatgcctccacgagatccagctgtaaggc
attttctcaattagtgatcagaggggaggtccctgtgggtggtgccatct
ctgggctggtagttttgggtctatagagagcaagctgaacaagccagagg
aagcaagccaataagcacacctccatagcctctgcatcagctctgcttct
gactgcttgagtcaagtcctgacatctttggggataaccgcaatggtgga
atgtaagctgatataccttcctccccaactgctcttgactgtagcttgtg
gcggaatagaaacc
gaattcttctgctgaagttctgtgacgctacctcaggctccttctgacgt
ttcctcgcacagagtatctgagcttgctcattgtctcttagaaaatcaaa
tgttgctcttctctaactaaataccaatatctctgcttttataatgaata
gctttcaccagaataggtttcatttttcctgagcatgtatgaactgtttt
aactaaagtgaagaatggagtttacacgtttaggcatctttccttctgtc
cctcctgagaaagtcttttttgtgacgtaagtgtgtccactgcggtccca
tatctccatgtgtcttctcagcattgtgctcattttaaatttttctgtgc
tcttccccatgttggcttccaggcctggttctacacatgagcttatccaa
acgcctgagacgtgactgctgcacgatcttcattctgcaaatggctaatg
tgtctaatgcagcggttctcaacatgtgggtcatgaccccttaggggtta
aatgactctctcacagaggttgcttaagaccatcagaaaacacagatatt
tacacggtgattcataacagtagcaatattgcagttatgaagtagcaata
ataatcttgtggatggggtcagcagaccatgagcagctgtattagagggt
cccagaattaggaagggtgagaaccactgctctaaagggattcatgtctg
tacctctaactgacaccttgagccctgtcctgagctgagcaccttattct
gcttacacatttctgttgttccccagtttctcttgttctgaaaccatcgt
tctcccaaggtaaagagacagaagccaaggagtgaccctgggctcctgtc
ccctgcttcccactcctcgcttatacattaacattccccctgactctccc
ttattggtgcagcctttgtccgccctccacaaccccactttcccct
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_22823372_22824553
seq2: B6Ng01-109B02.b_49_1212 (reverse)

seq1  GGTTTCTATTCCTGCACAAGCATCATGACCAAGAAGCAGTTGGGGAGGAA  50
      ||||||||||||  |||||||  ||    |||| ||||||||||||||||
seq2  GGTTTCTATTCCGCCACAAGCTACA--GTCAAG-AGCAGTTGGGGAGGAA  47

seq1  AGGGTTTATTCAGCTTACATTTTCCA-CATTGCTGTTAATCACCAAAGGA  99
        ||| || ||||||||||  ||||| |||||| ||| ||| ||||| ||
seq2  --GGTATA-TCAGCTTACA--TTCCACCATTGCGGTT-ATCCCCAAA-GA  90

seq1  TGTCAGGACTGGAACTCAAGCAGGTCAGGAAGCAGGAGCTGATGCAGAGG  149
      |||||||||| | ||||||||| |||| |||||| |||||||||||||||
seq2  TGTCAGGACTTG-ACTCAAGCA-GTCA-GAAGCA-GAGCTGATGCAGAGG  136

seq1  CTATGGAGGGATGTTGCTTATTGGCTTGCTTCCTCTGGCTTGTTCAGCTT  199
      |||||||||  || ||||||||||||||||||||||||||||||||||||
seq2  CTATGGAGG--TG-TGCTTATTGGCTTGCTTCCTCTGGCTTGTTCAGCTT  183

seq1  GCTCTCTTATAGACCCAAGACTACCAGCCCAGAGATGGCACCACCCACAG  249
      |||||| ||||||||||| |||||||||||||||||||||||||||||| 
seq2  GCTCTC-TATAGACCCAAAACTACCAGCCCAGAGATGGCACCACCCACA-  231

seq1  GGGACCTCCCCTCTTGATCACTAATTGAGAAAATGCCTTACAGCTGGATC  299
      ||||||||||||| ||||||||||||||||||||||||||||||||||||
seq2  GGGACCTCCCCTC-TGATCACTAATTGAGAAAATGCCTTACAGCTGGATC  280

seq1  TCGTGGAGGCATTTCCCCAATTGAAGCTCCTTTCTCTGTGATAACTCCAG  349
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTGGAGGCATTTCCCCAATTGAAGCTCCTTTCTCTGTGATAACTCCAG  330

seq1  CCTGTGTCAAGTTGACACAAAACTGG-CCAGTATATCAACTAACAGCATC  398
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTGTGTCAAGTTGACACAAAACTGGCCCAGTATATCAACTAACAGCATC  380

seq1  ATCCCAGGACTCCCACTTGAGTTCACATCTCCTCTCCCAAGATCATTCTT  448
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCCAGGACTCCCACTTGAGTTCACATCTCCTCTCCCAAGATCATTCTT  430

seq1  ACTGGGACTGCACCTCTACACAGGGTCCCCACCGAGACAGCCATGTTACC  498
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGGACTGCACCTCTACACAGGGTCCCCACCGAGACAGCCATGTTACC  480

seq1  ATGAGTCTTACTGCTCTGTCTGCACTTCCCACTAGCCACGCAGACAATCA  548
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAGTCTTACTGCTCTGTCTGCACTTCCCACTAGCCACGCAGACAATCA  530

seq1  AACCCGGTCCAGTGTGGAAAGGATATACAGATATGCTAAAATTCTTCTTT  598
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACCCGGTCCAGTGTGGAAAGGATATACAGATATGCTAAAATTCTTCTTT  580

seq1  TAAGAGACTTATTAGTTTTCAATTGCACATAACCATATGCATAAAACATG  648
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGAGACTTATTAGTTTTCAATTGCACATAACCATATGCATAAAACATG  630

seq1  GTTATGTAGAAAAATAACATTAAAAAGTTTAAATATTGGTTTATTATAAA  698
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTATGTAGAAAAATAACATTAAAAAGTTTAAATATTGGTTTATTATAAA  680

seq1  ACTACTAGAATTTTAATATAGTCATATGAGATTAGATAGTCTTAATTGTC  748
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTACTAGAATTTTAATATAGTCATATGAGATTAGATAGTCTTAATTGTC  730

seq1  CCATAGTGCCTTCCCTATCAAGGGTAAAGCTCCCTTAAGCCTATGTGTTT  798
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCATAGTGCCTTCCCTATCAAGGGTAAAGCTCCCTTAAGCCTATGTGTTT  780

seq1  TTTATAAAGCTAAGGATTACACAGTTTCACCTACATGTCTATAGGATCCC  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATAAAGCTAAGGATTACACAGTTTCACCTACATGTCTATAGGATCCC  830

seq1  TGAATCTCAAGGAGACTCTGATTCATGGCAGAATAGCTGGGTTGGATATA  898
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAATCTCAAGGAGACTCTGATTCATGGCAGAATAGCTGGGTTGGATATA  880

seq1  GACTTCCTGGATCACTTAAAAAACAAACAAACAAACAAACAAACCCCAGA  948
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACTTCCTGGATCACTTAAAAAACAAACAAACAAACAAACAAACCCCAGA  930

seq1  CTTTGTAGCTAATGTGCAATCATTCTGTTTTACAGTGTTATAAAAATATG  998
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGTAGCTAATGTGCAATCATTCTGTTTTACAGTGTTATAAAAATATG  980

seq1  AAAAAAAGATGTCATTCTTTCTGGAGGCATTGCTCAATGGTAGAACGAAT  1048
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAAAGATGTCATTCTTTCTGGAGGCATTGCTCAATGGTAGAACGAAT  1030

seq1  GCTTAGGATGCGTGAAGCCCCAAGTTCAATCCCTTAGCATGTTCTAAAAA  1098
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAGGATGCGTGAAGCCCCAAGTTCAATCCCTTAGCATGTTCTAAAAA  1080

seq1  AATCCTGAAAAAAGATTCAACTTTCTGGGGGAAAAGGGAGTTGAGACAGG  1148
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATCCTGAAAAAAGATTCAACTTTCTGGGGGAAAAGGGAGTTGAGACAGG  1130

seq1  GTCTCAATATGTAGACCAGGCTGTTCTAGAATTC  1182
      ||||||||||||||||||||||||||||||||||
seq2  GTCTCAATATGTAGACCAGGCTGTTCTAGAATTC  1164

seq1: chr16_22647548_22648494
seq2: B6Ng01-109B02.g_69_1014

seq1  GAATTCTTCTGCTGAAGTTCTGTGACGCTACCTCAGGCTCCTTCTGACGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTCTGCTGAAGTTCTGTGACGCTACCTCAGGCTCCTTCTGACGT  50

seq1  TTCCTCGCACAGAGTATCTGAGCTTGCTCATTGTCTCTTAGAAAATCAAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTCGCACAGAGTATCTGAGCTTGCTCATTGTCTCTTAGAAAATCAAA  100

seq1  TGTTGCTCTTCTCTAACTAAATACCAATATCTCTGCTTTTATAATGAATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCTTCTCTAACTAAATACCAATATCTCTGCTTTTATAATGAATA  150

seq1  GCTTTCACCAGAATAGGTTTCATTTTTCCTGAGCATGTATGAACTGTTTT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTCACCAGAATAGGTTTCATTTTTCCTGAGCATGTATGAACTGTTTT  200

seq1  AACTAAAGTGAAGAATGGAGTTTACACGTTTAGGCATCTTTCCTTCTGTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTAAAGTGAAGAATGGAGTTTACACGTTTAGGCATCTTTCCTTCTGTC  250

seq1  CCTCCTGAGAAAGTCTTTTTTGTGACGTAAGTGTGTCCACTGCGGTCCCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTCCTGAGAAAGTCTTTTTTGTGACGTAAGTGTGTCCACTGCGGTCCCA  300

seq1  TATCTCCATGTGTCTTCTCAGCATTGTGCTCATTTTAAATTTTTCTGTGC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATCTCCATGTGTCTTCTCAGCATTGTGCTCATTTTAAATTTTTCTGTGC  350

seq1  TCTTCCCCATGTTGGCTTCCAGGCCTGGTTCTACACATGAGCTTATCCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTCCCCATGTTGGCTTCCAGGCCTGGTTCTACACATGAGCTTATCCAA  400

seq1  ACGCCTGAGACGTGACTGCTGCACGATCTTCATTCTGCAAATGGCTAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGCCTGAGACGTGACTGCTGCACGATCTTCATTCTGCAAATGGCTAATG  450

seq1  TGTCTAATGCAGCGGTTCTCAACATGTGGGTCATGACCCCTTAGGGGTTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTCTAATGCAGCGGTTCTCAACATGTGGGTCATGACCCCTTAGGGGTTA  500

seq1  AATGACTCTCTCACAGAGGTTGCTTAAGACCATCAGAAAACACAGATATT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGACTCTCTCACAGAGGTTGCTTAAGACCATCAGAAAACACAGATATT  550

seq1  TACACGGTGATTCATAACAGTAGCAATATTGCAGTTATGAAGTAGCAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACGGTGATTCATAACAGTAGCAATATTGCAGTTATGAAGTAGCAATA  600

seq1  ATAATCTTGTGGATGGGGTCAGCAGACCATGAGCAGCTGTATTAGAGGGT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAATCTTGTGGATGGGGTCAGCAGACCATGAGCAGCTGTATTAGAGGGT  650

seq1  CCCAGAATTAGGAAGGGTGAGAACCACTGCTCTAAAGGGATTCATGTCTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCAGAATTAGGAAGGGTGAGAACCACTGCTCTAAAGGGATTCATGTCTG  700

seq1  TACCTCTAACTGACACCTTGAGCCCTGTCCTGAGCTGAGCACCTTATTCT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACCTCTAACTGACACCTTGAGCCCTGTCCTGAGCTGAGCACCTTATTCT  750

seq1  GCTTACACA-TTCTGTTGTTCCCCAG-TTCTCTCGTTCATGAAGCCATCG  798
      ||||||||| |||||||||||||||| |||||| |||| |||| ||||||
seq2  GCTTACACATTTCTGTTGTTCCCCAGTTTCTCTTGTTC-TGAAACCATCG  799

seq1  TTCTCCC-AGGCACAGAGACAGAAGCCAGGGAGTGACCCTGGGCTCCTGT  847
      ||||||| ||| | |||||||||||||| |||||||||||||||||||||
seq2  TTCTCCCAAGGTAAAGAGACAGAAGCCAAGGAGTGACCCTGGGCTCCTGT  849

seq1  CCCCTGCTTCCCACTCCTCGCTTATACATTACACATTCCCCCTGACTCTC  897
      ||||||||||||||||||||||||||||||| ||||||||||||||||||
seq2  CCCCTGCTTCCCACTCCTCGCTTATACATTA-ACATTCCCCCTGACTCTC  898

seq1  CCTTCATTGCTGCAGCCTTTGCTCGGCCCTCCATCACCCCACTTTCCCCT  947
      |||| |||| ||||||||||| || ||||||||  |||||||||||||||
seq2  CCTT-ATTGGTGCAGCCTTTG-TCCGCCCTCCACAACCCCACTTTCCCCT  946