BAC Information

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BAC

Clone NameB6Ng01-112M08
Chromosome16 (Build37)
Map Location 71,231,927 - 71,232,995
singlet/doubletsinglet
Overlap genenone
Upstream geneEG664930, Gbe1, D16Ertd519e, LOC100039231
Downstream genenone
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-112M08.bB6Ng01-112M08.g
ACCDH918747DH918748
length7221,066
definitionDH918747|Mus musculus domesticus DNA, BAC clone: B6Ng01-112M08, 5' end.DH918748|Mus musculus domesticus DNA, BAC clone: B6Ng01-112M08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctctggttagaattttggacatcacttatttataccatcatatca
tctatgaatagtggaagagtgatacttttcctttttcctttacagtttgt
atcaacttgatcttctattgtttccttattgatctaactagaactcagag
tactacattaaatagatagggagagattgggcattcttgtcttgtcctcg
attttagtgggattgcttctagtttcgctctacttaccttgatgttgggt
attggcttgctgtacattgcttttattgtttaggtttgtgccttttatcc
cagatctctacaagactttctaacatgcagaggtgttgaattttgtcaaa
ggcttttcagcaactcatgaagtgaatatatgatttttttcagtttatgt
tgtggattatgttgatggatttttgtatattgaaccaccctgcatcccag
gattgaagcctactggatcatggtgaatgatgtttttgatgtgttcttga
attcagtttgtgattgtttaattagtatatatatatttttttttgcatca
atgttcataaaagaaattggtctgaaattcttttttctttgttgagtcat
tgagtggtttaggagtcagggtgactgttactactgtttccatttgggag
aattaatgtgaggagtatttggtattatcactcctttgaaaatcggtgag
aaattctgtactgaaaccatct

gaattctctctgcaaattaactttcaagcataggtaacattagaatcatt
aatgagggagtgatttaagctgaatatcttcagaactagaatacgttatt
gctgatgacacagtggaaattttaagttgactttaatatcatttaaaatg
aaaagcaatgatatgtattctatatacatatgtatatatatatatatata
tatatatatatatatatatatatataaagttttatctttaaaaagaacat
aagctttctctatttctcaaagaatgtaaggtattgatttccagcgctgc
tttgaacatgccatgtttgtttgatatacgttcccattaaaactttctta
actctgagaatttgctttgtaagttgggatcaggaaaccattcatataat
caagttctctctctctctctccccccccccttcggtttgtgcaagatttt
gcttttctgtctttccaaatctattcagaagaatcagcattctatagatt
cctacttcttttacactaacattactttgatatggcccacattctttaac
tgctctttgagacagccaacacatacatacttttgagtgttagcaaacat
ctataatcacaattgatttactttgttagggtgagtagggaagccaaaga
aacctttggatgtgacatttttgtctactgtatgtacttgccttctagaa
atatcacagatctcagaaaaagatcttaagcttagtcattcattctaatt
ttcttgagactactgtgagctggtatatgtctatgatcccatgtgtattt
attcaggaatatctttctttccttatttgccaatatatcgtatatctagt
ttcaaattataaaggttttaaatctgagagtgtgttatttatgatgagga
tttcctctgtataatcttcccagtgtctattttttgattattaacatttt
tattgtaaaatagtcaaaaatcccttacattttacagatataataacact
ttttcattttatgggtatattttcaggggttaaagtctttattagagaaa
gctatgtaaaatttta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_71231927_71232995
seq2: B6Ng01-112M08.g_69_1133

seq1  GAATTCTCTCTGCAAATTAACTTTCAAGCATAGGTAACATTAGAATCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCTCTGCAAATTAACTTTCAAGCATAGGTAACATTAGAATCATT  50

seq1  AATGAGGGAGTGATTTAAGCTGAATATCTTCAGAACTAGAATACGTTATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAGGGAGTGATTTAAGCTGAATATCTTCAGAACTAGAATACGTTATT  100

seq1  GCTGATGACACAGTGGAAATTTTAAGTTGACTTTAATATCATTTAAAATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGATGACACAGTGGAAATTTTAAGTTGACTTTAATATCATTTAAAATG  150

seq1  AAAAGCAATGATATGTATTCTATATACATATGTATATATATATATATATA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGCAATGATATGTATTCTATATACATATGTATATATATATATATATA  200

seq1  TATATATATATATATATATATATATAAAGTTTTATCTTTAAAAAGAACAT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATATATATATATATATATATATATAAAGTTTTATCTTTAAAAAGAACAT  250

seq1  AAGCTTTCTCTATTTCTCAAAGAATGTAAGGTATTGATTTCCAGCGCTGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCTTTCTCTATTTCTCAAAGAATGTAAGGTATTGATTTCCAGCGCTGC  300

seq1  TTTGAACATGCCATGTTTGTTTGATATACGTTCCCATTAAAACTTTCTTA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAACATGCCATGTTTGTTTGATATACGTTCCCATTAAAACTTTCTTA  350

seq1  ACTCTGAGAATTTGCTTTGTAAGTTGGGATCAGGAAACCATTCATATAAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCTGAGAATTTGCTTTGTAAGTTGGGATCAGGAAACCATTCATATAAT  400

seq1  CAAGTTCTCTCTCTCTCTCTCCCCCCCCCCTTCGGTTTGTGCAAGATTTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAGTTCTCTCTCTCTCTCTCCCCCCCCCCTTCGGTTTGTGCAAGATTTT  450

seq1  GCTTTTCTGTCTTTCCAAATCTATTCAGAAGAATCAGCATTCTATAGATT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTTTCTGTCTTTCCAAATCTATTCAGAAGAATCAGCATTCTATAGATT  500

seq1  CCTACTTCTTTTACACTAACATTACTTTGATATGGCCCACATTCTTTAAC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTACTTCTTTTACACTAACATTACTTTGATATGGCCCACATTCTTTAAC  550

seq1  TGCTCTTTGAGACAGCCAACACATACATACTTTTGAGTGTTAGCAAACAT  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTCTTTGAGACAGCCAACACATACATACTTTTGAGTGTTAGCAAACAT  600

seq1  CTATAATCACAATTGATTTACTTTGTTAGGGTGAGTAGGGAAGCCAAAGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATAATCACAATTGATTTACTTTGTTAGGGTGAGTAGGGAAGCCAAAGA  650

seq1  AACCTTTGGATGTGACA-TTTTGTCTACTGTATGTACTTGCCTTCTAGAA  699
      ||||||||||||||||| ||||||||||||||||||||||||||||||||
seq2  AACCTTTGGATGTGACATTTTTGTCTACTGTATGTACTTGCCTTCTAGAA  700

seq1  ATATCACAGATCTCAGAAAAAGATCTTAAGCTTAGTCATTCATTCTAATT  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCACAGATCTCAGAAAAAGATCTTAAGCTTAGTCATTCATTCTAATT  750

seq1  TTCTTGAGACTACTGTGAGCTGGTATATGTCTATGATCCCATGTGTA-TT  798
      ||||||||||||||||||||||||||||||||||||||||||||||| ||
seq2  TTCTTGAGACTACTGTGAGCTGGTATATGTCTATGATCCCATGTGTATTT  800

seq1  ATTCAGGAATATCTTTCTTTCCTTATTTGCCAATATATCGTATATCTAGT  848
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCAGGAATATCTTTCTTTCCTTATTTGCCAATATATCGTATATCTAGT  850

seq1  TTCAAATTATAAAGGTTTT-AATCTGAGAGTGTGTTATTTATGATGAGGA  897
      ||||||||||||||||||| ||||||||||||||||||||||||||||||
seq2  TTCAAATTATAAAGGTTTTAAATCTGAGAGTGTGTTATTTATGATGAGGA  900

seq1  TTTTCCTCTGTATAATCTTCCCAGTGTCTATTTTTTGATTTATAACATTT  947
       |||||||||||||||||||||||||||||||||||||||  ||||||||
seq2  -TTTCCTCTGTATAATCTTCCCAGTGTCTATTTTTTGATTATTAACATTT  949

seq1  TTATATGTAAAATAGTCAAAAAATCCCTTACATTTTACAGATATTACTAT  997
      |||| |||||||||||| ||||||||||||||||||||||||| || || 
seq2  TTAT-TGTAAAATAGTC-AAAAATCCCTTACATTTTACAGATA-TAATAA  996

seq1  CACTTTTTCATTTTATTGTGTAATTATTTTCAGGTGTTTAAAGTCTTATA  1047
      ||||||||||||||| || |||  |||||||||| | ||||||||||   
seq2  CACTTTTTCATTTTA-TGGGTA--TATTTTCAGG-GGTTAAAGTCTTTAT  1042

seq1  TAGAGAAAGCTGATG--AAATTTT  1069
      ||||||||||| |||  |||||||
seq2  TAGAGAAAGCT-ATGTAAAATTTT  1065


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