BAC Information

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BAC

Clone NameB6Ng01-114E07
Chromosome16 (Build37)
Map Location 40,889,258 - 40,890,223
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC667400
Downstream geneEG667450, Lsamp
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114E07.bB6Ng01-114E07.g
ACCDH919830DH919831
length971363
definitionDH919830|Mus musculus domesticus DNA, BAC clone: B6Ng01-114E07, 5' end.DH919831|Mus musculus domesticus DNA, BAC clone: B6Ng01-114E07, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccataaattcattgtttttaatagctgagtagtactccattgtgt
aaatgtaccacattttctgtatccattcctctgttgagggacatctgtgt
tctttccagcttctggctataataaataaggcttctatgaacatagtgga
gcatgtgtccttattacatggtgtagcatcttctgggtatatgcccagga
gtggtattgctggatcttccagtaggactgtgaccaattgtctgaggaac
caccaaactgatttccagagtggttgtaaaagcttgcagtcccaccagca
atggaggagtgttctgtttgtctttctccacatcctggccatctgctgtc
acctcagtttttaatcttagccattctgactggtgtgactccatgtttct
actgtgggaccttaggaattgaagtagagttagaaggcttgcagggcaag
cacttttctccattgagtcatcctccaagatctgatctttgttttaaagt
tggagagtttctcagtgctcagctcacaaggaaacacaaagaaacagtcc
acactaacagcccattcctaagcttatcatcagatctatacactagcata
tgtagaagaagggttgttcctgctcaagaactgtattccagttggaagat
gcccatgacaggggctctcaggatgtcagtctcaacagagagctgcagta
ctaacactgtgaacctcgctgccctccagtcagcttagcaacatgaactt
cctcacactgttcagatatggcttaatgattccatgttcaagaagacccc
tgtagctgcaactttgccagcacatgtatctagaggtctgctgccatttt
ggtcttctatgaaagttctgtttcccagggaagacaggattacaattttg
gtctaataggttgagatggcatggtgtattcctccgttatcaaaattcct
tgtgtagtggtggggttttag

tattcctggctcacttaaatagaacttggccttacaagaacctgaagaat
caaagcagggtgcctgtgtgggtctccatcatgtcctctgcatacatgtt
atggctgttaccatggtgtgtttgtgggactcttaacagtggaagcatgt
gttatctataactcttttgcctgctcttgggactcttttcctgctattgg
gttggtttgttcagccttgatatgaggggtttgttttgttttgttttgcc
ttgctttgctttattgaattctgttttgtcttgtttgatggttgtctctt
ggtggactactcttttctgaagggaaaaacaagagtagtagatgtggggt
gatgggagtgttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_40889258_40890223
seq2: B6Ng01-114E07.b_46_1016

seq1  GAATTCCATAAATTCATTGTTTTTAATAGCTGAGTAGTACTCCATTGTGT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCCATAAATTCATTGTTTTTAATAGCTGAGTAGTACTCCATTGTGT  50

seq1  AAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGTGT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGTACCACATTTTCTGTATCCATTCCTCTGTTGAGGGACATCTGTGT  100

seq1  TCTTTCCAGCTTCTGGCTATAATAAATAAGGCTTCTATGAACATAGTGGA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTCCAGCTTCTGGCTATAATAAATAAGGCTTCTATGAACATAGTGGA  150

seq1  GCATGTGTCCTTATTACATGGTGTAGCATCTTCTGGGTATATGCCCAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATGTGTCCTTATTACATGGTGTAGCATCTTCTGGGTATATGCCCAGGA  200

seq1  GTGGTATTGCTGGATCTTCCAGTAGGACTGTGACCAATTGTCTGAGGAAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGGTATTGCTGGATCTTCCAGTAGGACTGTGACCAATTGTCTGAGGAAC  250

seq1  CACCAAACTGATTTCCAGAGTGGTTGTAAAAGCTTGCAGTCCCACCAGCA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCAAACTGATTTCCAGAGTGGTTGTAAAAGCTTGCAGTCCCACCAGCA  300

seq1  ATGGAGGAGTGTTCTGTTTGTCTTTCTCCACATCCTGGCCATCTGCTGTC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGAGGAGTGTTCTGTTTGTCTTTCTCCACATCCTGGCCATCTGCTGTC  350

seq1  ACCTCAGTTTTTAATCTTAGCCATTCTGACTGGTGTGACTCCATGTTTCT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAGTTTTTAATCTTAGCCATTCTGACTGGTGTGACTCCATGTTTCT  400

seq1  ACTGTGGGACCTTAGGAATTGAAGTAGAGTTAGAAGGCTTGCAGGGCAAG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGTGGGACCTTAGGAATTGAAGTAGAGTTAGAAGGCTTGCAGGGCAAG  450

seq1  CACTTTTCTCCATTGAGTCATCCTCCAAGATCTGATCTTTGTTTTAAAGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACTTTTCTCCATTGAGTCATCCTCCAAGATCTGATCTTTGTTTTAAAGT  500

seq1  TGGAGAGTTTCTCAGTGCTCAGCTCACAAGGAAACACAAAGAAACAGTCC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGAGAGTTTCTCAGTGCTCAGCTCACAAGGAAACACAAAGAAACAGTCC  550

seq1  ACACTAACAGCCCATTCCTAAGCTTATCATCAGATCTATACACTAGCATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACACTAACAGCCCATTCCTAAGCTTATCATCAGATCTATACACTAGCATA  600

seq1  TGTAGAAGAAGGGTTGTTCCTGCTCAAGAACTGTATTCCAGTTGGAAGAT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGAAGAAGGGTTGTTCCTGCTCAAGAACTGTATTCCAGTTGGAAGAT  650

seq1  GCCCATGACAGGGGCTCTCAGGATGTCAGTCTCAACAGAGAGCTGCAGTA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCCATGACAGGGGCTCTCAGGATGTCAGTCTCAACAGAGAGCTGCAGTA  700

seq1  CTAACACTGTGAACCTCGCTGCCCTCCAGTCAGCTTAGCAACATGAACTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACACTGTGAACCTCGCTGCCCTCCAGTCAGCTTAGCAACATGAACTT  750

seq1  CCTCACACTGTTCAGATATGGCTTAATGATTCCATGTTCAAGAAGAACCC  800
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CCTCACACTGTTCAGATATGGCTTAATGATTCCATGTTCAAGAAGACCCC  800

seq1  TGTAGCTGCAACTTTGCCAGCACATGTATCTAGAGGTCTGCTGCCATTTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTGCAACTTTGCCAGCACATGTATCTAGAGGTCTGCTGCCATTTT  850

seq1  GGTCTTCTATGAAAGTTCTG-TTGCCAAGGAAGACAGGATTACAATTTT-  898
      |||||||||||||||||||| || ||| ||||||||||||||||||||| 
seq2  GGTCTTCTATGAAAGTTCTGTTTCCCAGGGAAGACAGGATTACAATTTTG  900

seq1  GTCTAATAGATTGAGATGGCATGGTGTATT-CTCCGTTATCAAAA-TCCT  946
      ||||||||| |||||||||||||||||||| |||||||||||||| ||||
seq2  GTCTAATAGGTTGAGATGGCATGGTGTATTCCTCCGTTATCAAAATTCCT  950

seq1  TGTGTAGT-GTGGGGTTTTAG  966
      |||||||| ||||||||||||
seq2  TGTGTAGTGGTGGGGTTTTAG  971


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