BAC Information

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BAC

Clone NameB6Ng01-114O06
Chromosome16 (Build37)
Map Location 59,273,322 - 59,462,219
singlet/doubletdoublet
Overlap geneOlfr202, Olfr203, Olfr204, Olfr205, GA_x5J8B7U0478-6-340, Olfr206, Olfr207, Gabrr3, LOC100043803
Upstream geneLOC100043477, Dcbld2, St3gal6, LOC100043480, Gm813, E330017A01Rik, Cpox, LOC100043790, Gpr15, Cldnd1, Olfr172, Olfr173, Olfr174, Olfr178, Olfr180, Olfr1563-ps1, Olfr181, Olfr182-ps1, Olfr183, Olfr185-ps1, Olfr186, Olfr187, Olfr188-ps1, Olfr189-ps1, Olfr190, Olfr191, Olfr192, Olfr193, Olfr1540-ps1, Olfr194, Olfr195, Olfr196, Olfr197, Olfr198, Olfr199, Olfr200-ps1, Olfr201
Downstream geneMina, BC043118, LOC672884, Arl6, Epha6, LOC100043804
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-114O06.bB6Ng01-114O06.g
ACCDH920294DH920295
length9611,070
definitionDH920294|Mus musculus domesticus DNA, BAC clone: B6Ng01-114O06, 5' end.DH920295|Mus musculus domesticus DNA, BAC clone: B6Ng01-114O06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(59,461,259 - 59,462,219)(59,273,322 - 59,274,396)
sequence
gaattcttcttgccaccatgcctgctgcttgctgtcatgattctttgcca
tcttgggcacttatctctctggaactgtgggaccaaataactctttcctc
taaaagttgctttggtcattttcttacatcactgttatagagaagtaatg
aatacaaacataaatgaaattacgaaaaatcctaatatatgaaatttcac
aggactcttaattgtgtgtaacgtaatcacttgaagatggaagctctctc
ttaggacaatgttatttgtcatttggcagacactaagaaatcagttatcc
ttgaataactgccatagtccagctttattccctactttaaaaagatcaat
tttagaaaagtgtgttaagatgaaatagttgcaaaatatttattcccgat
ggaaaaatttcccttataatacacatgcttatgatgcttacttataaagt
caaatttccccaaggctctgaacattgcactaaatgttaatcagtcatcg
tttacatcttcctgaggccaagagacatgactggctctatcccagtttaa
ctgtccaactcatatccagggaataaacaaataccacctgactcgaatgg
aagtctacataaaacattcctcttcagtctggggttggtaaaatacttat
ttaacatgtgtaacaccctgagtactgcaaagaaaggaaaaagtcaacaa
gcagagaagtcctcttcacacatatataccccagtaaaacaaattaaata
ttatataaacggtggggaatacaattctagaataggtatcgatgacgtgg
ttgttttccaggatgattctacaacgtttcctcccagggatttccttttt
atctgagatgatctgcacaggggcttcctgtgaactttgtactcatggag
tcctcttcctgagtgtagagagaaggaagtctggtcacatcagttctcgc
tggtcatggta
gaattctttagattctttaagttgtagttatatgactgataataaaaata
aaactaagccaggcatggtggcacacgcctttaatcctagcactccggag
gcagaggcagggagatttctgagtttgaggccaaactggtctacaaagtg
agttccaggacagccaggactacacagagaaaccctgtctcaaaaaacca
aaaatgaataaataaataaataaataaataaataaataaataaataaata
aaattgctctgtctgtattttgtaaatgactgaacttgtaacatgtaatg
aaaaacccaatcacataatctgtacttcttggataatcgttagactgact
gtgctgcgaaacctgtataagcacctgattggtggtcagtcagagctgca
gaagcggtcagattgctagtgagcccaggacagcccctggcaatacactt
ttttctgtttattcaaggcagctccacacctgacttccttgaatgccgta
gcctcatctgagtcaagctatctggagaaataccacaatgtcgggtgtcg
ggaatcatcccacaaatcataagaacaccgatctcaattcagcaagaata
gtttattgagagcataccccaagactaatcgatcagggaaacagaggact
caggagccaaactgtgatgcttgcctgttcttagagaaggattttcattg
gaaaaatcaagtgcaaaagctcagaaggcaacggtaggaagtgcagtaca
ttttggctaaccagaaaagtattatcagctgactcttaaggtaagtggtc
ctaagtgaggtaactgaggtgacggttaggggtgttccagaatactgagt
taacagagcatgagtatcacaaccttagtgctatgacctttaggagaatt
tttcagtatcagctatgggtaattacttctgggaaatggagtctgaaacc
tgaacttaatttcaccttatgggcaaataaagactacatgcaatggttac
agttgtttaaaagggtcaagcagagatctaagtatgacctgagtttaaac
aaaaatatcgatgaaatgtt
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_59461259_59462219
seq2: B6Ng01-114O06.b_49_1009 (reverse)

seq1  TACCATGA-CAGCGAG-ACTGATGTGGACCAGACTTCCTTCTCTCTACAC  48
      |||||||| ||||||| |||||||| ||||||||||||||||||||||||
seq2  TACCATGACCAGCGAGAACTGATGT-GACCAGACTTCCTTCTCTCTACAC  49

seq1  TCA-GAAGAGGACTCCATGAGTACAAAGTTCACAGGAAGCCCCTGTGCAG  97
      ||| ||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGGAAGAGGACTCCATGAGTACAAAGTTCACAGGAAGCCCCTGTGCAG  99

seq1  ATTCATCTCAGATAAAAAGGAAATCCCTGGGAGGAAACGTTGGTAGAATC  147
      | ||||||||||||||||||||||||||||||||||||||| ||||||||
seq2  A-TCATCTCAGATAAAAAGGAAATCCCTGGGAGGAAACGTT-GTAGAATC  147

seq1  ATCCTGGAAAACAACCACGTCATCGATACCTATTCTAGAATTGTATTCCC  197
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTGGAAAACAACCACGTCATCGATACCTATTCTAGAATTGTATTCCC  197

seq1  CACCGTTTATATAATATTTAATTTGTTTTACTGGGGTATATATGTGTGAA  247
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACCGTTTATATAATATTTAATTTGTTTTACTGGGGTATATATGTGTGAA  247

seq1  GAGGACTTCTCTGCTTGTTGACTTTTTCCTTTCTTTGCAGTACTCAGGGT  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGGACTTCTCTGCTTGTTGACTTTTTCCTTTCTTTGCAGTACTCAGGGT  297

seq1  GTTACACATGTTAAATAAGTATTTTACCAACCCCAGACTGAAGAGGAATG  347
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTACACATGTTAAATAAGTATTTTACCAACCCCAGACTGAAGAGGAATG  347

seq1  TTTTATGTAGACTTCCATTCGAGTCAGGTGGTATTTGTTTATTCCCTGGA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATGTAGACTTCCATTCGAGTCAGGTGGTATTTGTTTATTCCCTGGA  397

seq1  TATGAGTTGGACAGTTAAACTGGGATAGAGCCAGTCATGTCTCTTGGCCT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGAGTTGGACAGTTAAACTGGGATAGAGCCAGTCATGTCTCTTGGCCT  447

seq1  CAGGAAGATGTAAACGATGACTGATTAACATTTAGTGCAATGTTCAGAGC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAAGATGTAAACGATGACTGATTAACATTTAGTGCAATGTTCAGAGC  497

seq1  CTTGGGGAAATTTGACTTTATAAGTAAGCATCATAAGCATGTGTATTATA  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGGGAAATTTGACTTTATAAGTAAGCATCATAAGCATGTGTATTATA  547

seq1  AGGGAAATTTTTCCATCGGGAATAAATATTTTGCAACTATTTCATCTTAA  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAATTTTTCCATCGGGAATAAATATTTTGCAACTATTTCATCTTAA  597

seq1  CACACTTTTCTAAAATTGATCTTTTTAAAGTAGGGAATAAAGCTGGACTA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACACTTTTCTAAAATTGATCTTTTTAAAGTAGGGAATAAAGCTGGACTA  647

seq1  TGGCAGTTATTCAAGGATAACTGATTTCTTAGTGTCTGCCAAATGACAAA  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGCAGTTATTCAAGGATAACTGATTTCTTAGTGTCTGCCAAATGACAAA  697

seq1  TAACATTGTCCTAAGAGAGAGCTTCCATCTTCAAGTGATTACGTTACACA  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACATTGTCCTAAGAGAGAGCTTCCATCTTCAAGTGATTACGTTACACA  747

seq1  CAATTAAGAGTCCTGTGAAATTTCATATATTAGGATTTTTCGTAATTTCA  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAATTAAGAGTCCTGTGAAATTTCATATATTAGGATTTTTCGTAATTTCA  797

seq1  TTTATGTTTGTATTCATTACTTCTCTATAACAGTGATGTAAGAAAATGAC  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATGTTTGTATTCATTACTTCTCTATAACAGTGATGTAAGAAAATGAC  847

seq1  CAAAGCAACTTTTAGAGGAAAGAGTTATTTGGTCCCACAGTTCCAGAGAG  897
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAGCAACTTTTAGAGGAAAGAGTTATTTGGTCCCACAGTTCCAGAGAG  897

seq1  ATAAGTGCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCATGGT  947
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAGTGCCCAAGATGGCAAAGAATCATGACAGCAAGCAGCAGGCATGGT  947

seq1  GGCAAGAAGAATTC  961
      ||||||||||||||
seq2  GGCAAGAAGAATTC  961

seq1: chr16_59273322_59274396
seq2: B6Ng01-114O06.g_66_1135

seq1  GAATTCTTTAGATTCTTTAAGTTGTAGTTATATGACTGATAATAAAAATA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTAGATTCTTTAAGTTGTAGTTATATGACTGATAATAAAAATA  50

seq1  AAACTAAGCCAGGCATGGTGGCACACGCCTTTAATCCTAGCACTCCGGAG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACTAAGCCAGGCATGGTGGCACACGCCTTTAATCCTAGCACTCCGGAG  100

seq1  GCAGAGGCAGGGAGATTTCTGAGTTTGAGGCCAAACTGGTCTACAAAGTG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAGGCAGGGAGATTTCTGAGTTTGAGGCCAAACTGGTCTACAAAGTG  150

seq1  AGTTCCAGGACAGCCAGGACTACACAGAGAAACCCTGTCTCAAAAAACCA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTCCAGGACAGCCAGGACTACACAGAGAAACCCTGTCTCAAAAAACCA  200

seq1  AAAATGAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAATGAATAAATAAATAAATAAATAAATAAATAAATAAATAAATAAATA  250

seq1  AAATTGCTCTGTCTGTATTTTGTAAATGACTGAACTTGTAACATGTAATG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTGCTCTGTCTGTATTTTGTAAATGACTGAACTTGTAACATGTAATG  300

seq1  AAAAACCCAATCACATAATCTGTACTTCTTGGATAATCGTTAGACTGACT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAACCCAATCACATAATCTGTACTTCTTGGATAATCGTTAGACTGACT  350

seq1  GTGCTGCGAAACCTGTATAAGCACCTGATTGGTGGTCAGTCAGAGCTGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGCTGCGAAACCTGTATAAGCACCTGATTGGTGGTCAGTCAGAGCTGCA  400

seq1  GAAGCGGTCAGATTGCTAGTGAGCCCAGGACAGCCCCTGGCAATACACTT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAGCGGTCAGATTGCTAGTGAGCCCAGGACAGCCCCTGGCAATACACTT  450

seq1  TTTTCTGTTTATTCAAGGCAGCTCCACACCTGACTTCCTTGAATGCCGTA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGTTTATTCAAGGCAGCTCCACACCTGACTTCCTTGAATGCCGTA  500

seq1  GCCTCATCTGAGTCAAGCTATCTGGAGAAATACCACAATGTCGGGTGTCG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTCATCTGAGTCAAGCTATCTGGAGAAATACCACAATGTCGGGTGTCG  550

seq1  GGAATCATCCCACAAATCATAAGAACACCGATCTCAATTCAGCAAGAATA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAATCATCCCACAAATCATAAGAACACCGATCTCAATTCAGCAAGAATA  600

seq1  GTTTATTGAGAGCATACCCCAAGACTAATCGATCAGGGAAACAGAGGACT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTATTGAGAGCATACCCCAAGACTAATCGATCAGGGAAACAGAGGACT  650

seq1  CAGGAGCCAAACTGTGATGCTTGCCTGTTCTTAGAGAAGGATTTTCATTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGGAGCCAAACTGTGATGCTTGCCTGTTCTTAGAGAAGGATTTTCATTG  700

seq1  GAAAAATCAAGTGCAAAAGCTCAGAAGGCAACGGTAGGAAGTGCAGTACA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAAAAATCAAGTGCAAAAGCTCAGAAGGCAACGGTAGGAAGTGCAGTACA  750

seq1  TTTTGGCTAACCAGAAAAGTATTATCAGCTGACTCTTAAGGTAAGTGGTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTGGCTAACCAGAAAAGTATTATCAGCTGACTCTTAAGGTAAGTGGTC  800

seq1  CTAAGTGAGGTAACTGAGGTGACGGTTAGGGGTGTTCCAGAATACTGAGT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAAGTGAGGTAACTGAGGTGACGGTTAGGGGTGTTCCAGAATACTGAGT  850

seq1  TAACAGAGCATGAGTATCACAACCTTAGTGCTATGACCTTTTAGGAGAAT  900
      |||||||||||||||||||||||||||||||||||||| |||||||||||
seq2  TAACAGAGCATGAGTATCACAACCTTAGTGCTATGACC-TTTAGGAGAAT  899

seq1  TTTTCAGTATCAGCTATGGGTAATTACTTCTGGGAAATGGAGTCTGAAAA  950
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  TTTTCAGTATCAGCTATGGGTAATTACTTCTGGGAAATGGAGTCTG-AAA  948

seq1  CCTGAACTTAATTTCACCTTATGGGCAAAATAAAGACTACATGCAATGGT  1000
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  CCTGAACTTAATTTCACCTTATGGGC-AAATAAAGACTACATGCAATGGT  997

seq1  TACAGTTGTATTAAAAGGGCCAAGCAGAAGATTCTAAGTATGACCTGAGT  1050
      ||||||||| ||||||||| ||||||| ||| ||||||||||||||||||
seq2  TACAGTTGT-TTAAAAGGGTCAAGCAG-AGA-TCTAAGTATGACCTGAGT  1044

seq1  TTATAC-AAAATATCGATGAGATGTT  1075
      ||| || ||||||||||||| |||||
seq2  TTAAACAAAAATATCGATGAAATGTT  1070