BAC Information

Click to search

BAC

Clone NameB6Ng01-115J15
Chromosome16 (Build37)
Map Location 42,063,677 - 42,064,583
singlet/doubletsinglet
Overlap geneLsamp
Upstream geneEG667450
Downstream geneGap43, BC002163
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-115J15.bB6Ng01-115J15.g
ACCDH920823DH920824
length1,243906
definitionDH920823|Mus musculus domesticus DNA, BAC clone: B6Ng01-115J15, 5' end.DH920824|Mus musculus domesticus DNA, BAC clone: B6Ng01-115J15, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctttgttcagttctgagccccattttttaatggggttatttgatt
ttctgaagtccaccttcttgagttctttatatatgttggatattagtccc
ctatctgatttaggataggtaaagatcctttcccaatctgttggtggtct
ttttgtcttattgacggtgtcttttgccttgcagaaactttggagtttca
ttaggtcccatttgtcaattctcgatcttacagcacaagccattgctgtt
ctgttcaggaatttttcccctgtgcccatatcttcaaggcttttccccac
tttctcctctataagtttcagtgtctctggttttatgtgaagttccttga
tccacttagatttgaccttagtacaaggagataagtatggatcgattcgc
attcttctacacgataacaaccagttgtgccagcaccaattgttgaaaat
gctgtctttcttccactggatggttttagctcccttgtcgaagatcaagt
gaccataggtgtgtgggttcatttctgggtcttcaattctattccattgg
tctacttgtctgtctctataccagtaccatgcagttttttatcacaattg
ctctgtagtaaagctttaggtctggcatggtgattccgccagaagttctt
ttatccttgagaagactttttcctaacctaggttttttgttattccagac
aaatttgcaaattgctccttccaattcgttgaagaattgacttggaattt
tgatggggattgcattgaatctgtagattgcttttggcaagatagccatt
tttacaatgttgatcctgccaatccatgagcatgggagatctttccattt
tctgagatcttccttaatttctttctttcagagatttaagtttttatcat
acagatctttcactttcttagttagagtcacgcccagatattttatatta
tttgtaactattgagaaagggtgttgtttccctaatttctttctcagcct
gtttattctttgtatagaggaaaggcaatggacttgtttgagtttatttt
aattcagctacttcaccaaagctgtttattcaggttagggagttctttgg
tagattttagggtcccttataataataatcatatatctgccaaagtggat
attttgacctcctcctatccaatgggaatctgaacctttgatgtcatgtc
tggcttaacctcgagtcaatggttgaaagagatgatgtggaaa
gaattccagtgtaggatattaatgtttaaaatctaacatcaatcatccaa
tagtgaggtctttggaaccaaacacaggggctcacagaagattcttgcct
cttctgcagattgatctccagcctgcctcttttctttgaagtttgtagtt
tagtccagtagattgggagtggtggaggaattaaaaatgaagaaagaaag
ggagcaacaaggggcttggtagccgaaatacaaagagagtcagatgcaat
ggaatatgaaagttggtacacctaacgtatacaatgagcaagcagaaatg
caactttctgttgcatctttcaaacttcagcttttcaatctcaaggctaa
gttcccatcacccaacagttcttatttgtcttatacataacacaagtcaa
gagaacgaagaaacactcaatcatttacactgttggaccttaaggtgtgc
cacatgaagaagaatgcttttccaatgcctaacattattaatggtactct
gttatgcttgcagacaggagcatgttgtcatgggactcttacggaagact
aggagaaaggattgtgggcctcaaaggggataggaaccccacaggaagac
caacagagtcaactcacctgactctttggactctcagatactgaaccacc
aagcaaagaatataagggggctggagctaagcctaccaacacatatggag
tcgatgtttagcttggtcttcatgtgggtccagaagaaatggggcaggga
ttatctcaaaagctgttgcctgtatttgggatatgctcttctagctcagt
gggagaggaagcacctagcatcacagagaactgaagcaccagaggaggga
atacctgggggtgtgtacacccactcagaggagaaggggagggagtgatg
ggggaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_42063677_42064583
seq2: B6Ng01-115J15.g_70_975 (reverse)

seq1  TTCCCCCATCACTCCCTCCCCTTCTCCTCTGAGTGGGTGTACACACCCCC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCCCCATCACTCCCTCCCCTTCTCCTCTGAGTGGGTGTACACACCCCC  50

seq1  AGGTATTCCCCTCCTCTGGTGCTTCAGTTCTCTGTGATGCTAGGTGCTTC  100
      ||||||| ||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTATT-CCCTCCTCTGGTGCTTCAGTTCTCTGTGATGCTAGGTGCTTC  99

seq1  CTCTCCCACTGAGCTAGAAGAGCATATCCCAAATACAGGCAACAGCTTTT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTCCCACTGAGCTAGAAGAGCATATCCCAAATACAGGCAACAGCTTTT  149

seq1  GAGATAATCCCTGCCCCATTTCTTCTGGACCCACATGAAGACCAAGCTAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATAATCCCTGCCCCATTTCTTCTGGACCCACATGAAGACCAAGCTAA  199

seq1  ACATCGACTCCATATGTGTTGGTAGGCTTAGCTCCAGCCCCCTTATATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACATCGACTCCATATGTGTTGGTAGGCTTAGCTCCAGCCCCCTTATATTC  249

seq1  TTTGCTTGGTGGTTCAGTATCTGAGAGTCCAAAGAGTCAGGTGAGTTGAC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGCTTGGTGGTTCAGTATCTGAGAGTCCAAAGAGTCAGGTGAGTTGAC  299

seq1  TCTGTTGGTCTTCCTGTGGGGTTCCTATCCCCTTTGAGGCCCACAATCCT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTTGGTCTTCCTGTGGGGTTCCTATCCCCTTTGAGGCCCACAATCCT  349

seq1  TTCTCCTAGTCTTCCGTAAGAGTCCCATGACAACATGCTCCTGTCTGCAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCTCCTAGTCTTCCGTAAGAGTCCCATGACAACATGCTCCTGTCTGCAA  399

seq1  GCATAACAGAGTACCATTAATAATGTTAGGCATTGGAAAAGCATTCTTCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATAACAGAGTACCATTAATAATGTTAGGCATTGGAAAAGCATTCTTCT  449

seq1  TCATGTGGCACACCTTAAGGTCCAACAGTGTAAATGATTGAGTGTTTCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATGTGGCACACCTTAAGGTCCAACAGTGTAAATGATTGAGTGTTTCTT  499

seq1  CGTTCTCTTGACTTGTGTTATGTATAAGACAAATAAGAACTGTTGGGTGA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGTTCTCTTGACTTGTGTTATGTATAAGACAAATAAGAACTGTTGGGTGA  549

seq1  TGGGAACTTAGCCTTGAGATTGAAAAGCTGAAGTTTGAAAGATGCAACAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGAACTTAGCCTTGAGATTGAAAAGCTGAAGTTTGAAAGATGCAACAG  599

seq1  AAAGTTGCATTTCTGCTTGCTCATTGTATACGTTAGGTGTACCAACTTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGTTGCATTTCTGCTTGCTCATTGTATACGTTAGGTGTACCAACTTTC  649

seq1  ATATTCCATTGCATCTGACTCTCTTTGTATTTCGGCTACCAAGCCCCTTG  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCATTGCATCTGACTCTCTTTGTATTTCGGCTACCAAGCCCCTTG  699

seq1  TTGCTCCCTTTCTTTCTTCATTTTTAATTCCTCCACCACTCCCAATCTAC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGCTCCCTTTCTTTCTTCATTTTTAATTCCTCCACCACTCCCAATCTAC  749

seq1  TGGACTAAACTACAAACTTCAAAGAAAAGAGGCAGGCTGGAGATCAATCT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGACTAAACTACAAACTTCAAAGAAAAGAGGCAGGCTGGAGATCAATCT  799

seq1  GCAGAAGAGGCAAGAATCTTCTGTGAGCCCCTGTGTTTGGTTCCAAAGAC  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAGAAGAGGCAAGAATCTTCTGTGAGCCCCTGTGTTTGGTTCCAAAGAC  849

seq1  CTCACTATTGGATGATTGATGTTAGATTTTAAACATTAATATCCTACACT  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCACTATTGGATGATTGATGTTAGATTTTAAACATTAATATCCTACACT  899

seq1  GGAATTC  907
      |||||||
seq2  GGAATTC  906