BAC Information

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BAC

Clone NameB6Ng01-122F06
Chromosome16 (Build37)
Map Location 15,471,591 - 15,620,186
singlet/doubletdoublet
Overlap geneUbe2v2, LOC665682
Upstream geneAbcc1, Gm1758, Snai2, Efcab1, LOC100042737, LOC665653, LOC385748, LOC100042743, LOC547302, EG632352
Downstream geneMcm4, Prkdc, 2410018G20Rik, Cebpd, 2310008H04Rik, LOC100043266, LOC224010, D16Ertd727e, Pkp2, EG433003, Yars2, Dnm1l, LOC665743, Fgd4
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-122F06.bB6Ng01-122F06.g
ACCDH925782DH925783
length1,133782
definitionDH925782|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F06, 5' end.DH925783|Mus musculus domesticus DNA, BAC clone: B6Ng01-122F06, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(15,619,041 - 15,620,186)(15,471,591 - 15,472,369)
sequence
gaattcagcatagcaacacactattggcttactcaaacatcagcagaaaa
attacaggtacgtgcagggtgtcagagttctgtgagttgttgactcagtt
cagatagccctgttatatcctcacattcttctttatctttaaggttaagc
tgttcccaggaatgttttaactacggggcatacccaggtttgtttttctt
tttttctcagccccaggcagcctctaggctcacaaaaaaaaaaaaaaaaa
aaaaaaaaaaaaacagcaatttctgagtactttaaatgacttacaagtct
tgaaatttcatctttctttcaattataatctgaagtaggttctaaataag
actgttccttgaaaatttctctcctcgtatcatctttcttcaaatcacca
ggcaaatacaggtgtgcataaagcttagaaacagctaaatcggactggag
agatggctcagcagttaaaagctctgactgctcttcccgaggacctgagt
tcaattcccagcaaccacatggtggctcacaaccatttgcaatggaatca
atgccctcttctggtgtgtctgaagacaacaacagagtactcatatacat
aaaataaatagaaagaaagaaaggaaggaaggaaggaaggaaggaaggaa
ggaaggaaggaaggaagagagagaaaagaaagagctaaatcacttcatat
aaaagtcattcacagagaagaagcttccctgtgaatttcaacataaaatg
tacaaaagtgagccaatgttattaatttgtcaaaactggggatctcctta
acatacacatgctagtcgttgaaaaatttaggcatgtctgtccataaaat
tcagtacattcagcaaaacaaagggcagctagcacatgacccttgtactc
ctccaacaacaaagtacagactactgattctgttccagaacccttcattc
tctgccagccagtgaactatgatctcagaagcagcttctaacacaaaata
cagaaaatgattaagttacaactattctcgtaaaggctgacaagcttctt
gaatcaaagagataagaatttgtaatgaaaacttctttgtccttatacac
ctaaactaaaagagagagggggtggtggggagg
gaattcttttcaaaatcaacacagccaatgaaccagaatcttaccctcat
ctaacgtctgtgccaccctccaagcagaaccattcttcatcgaaacaatt
gatgaatgacttcattggatagaccatcttaatacacacaccatttctta
aatgaatgtaacctgtttcctgaaaatgatgacaatcactcaagtcaaat
agctttgaccggagcaggaaatctgaatccaaaagaaatgcctacaattc
attccttggtgcagcagaactgtcaactcttagcttatctactatggagg
taaaattctttggtgatgtgaaggacattcaagtacagccttattacaat
gaactccaatgtccaaaaactgttcttatgttgtgtttgtaccacagtaa
gagccaagaatctaagctctactaaaaataaaacaaacaaagaaacaaaa
agactttatctatttatattcattaaaaaacatggtgatggggtgggtgg
ctatgggggacttttggtatagcattggaaatgtaaatgagctaaatacc
taataaaaaatggaaaaaaaaacatggtgatattttaaaaatatcataca
gttgatatatttgcagttatttaaaattttattgagaaaaatgtatgtat
tttcagtatttgctgtagaaaaaacatctacataagactgttcaatttga
ttgttgtttttatatcaaacaacttttataatactcatttttattgtaca
ataattttataattttaaagattatgataaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_15619041_15620186
seq2: B6Ng01-122F06.b_49_1181 (reverse)

seq1  CCTCCCCAC--CCCCTTTACTCTTTT-GTGTATAGTGTATAAAGGACAAA  47
      |||||||||  |||| |  ||||||| || ||  |||||| |||||||||
seq2  CCTCCCCACCACCCCCTCTCTCTTTTAGTTTA-GGTGTAT-AAGGACAAA  48

seq1  GACGTTCTCATTTACAAAATCTTATCTCTCTAGATTCCAAAGAGCTTGTC  97
      || ||| ||| ||||||| |||||||||| | |||| |||  ||||||||
seq2  GAAGTTTTCA-TTACAAATTCTTATCTCT-TTGATT-CAAGAAGCTTGTC  95

seq1  AGCATATTACAAAAAAAATAGTTTGTAAACTAATACATTTTCTGTATTTT  147
      ||| | ||||    | ||||| ||||||  |||| |||||||||||||||
seq2  AGCCT-TTAC---GAGAATAG-TTGTAACTTAAT-CATTTTCTGTATTTT  139

seq1  GTGTTAAGATAGCTACTTCTGAGTATCATAGTTCACTGGCTGGCAGAGAA  197
      ||||| ||| |||| |||||||| ||||||||||||||||||||||||||
seq2  GTGTT-AGA-AGCTGCTTCTGAG-ATCATAGTTCACTGGCTGGCAGAGAA  186

seq1  TTGAAGGGTTCTGGAACAGAATACAGTAGTCTGTACTTTGTTGTTTGGAG  247
       ||||||||||||||||||||| |||||||||||||||||||| ||||||
seq2  -TGAAGGGTTCTGGAACAGAAT-CAGTAGTCTGTACTTTGTTG-TTGGAG  233

seq1  GAGTACAAGGGTCATGTGCTAGCTGCCCTTTGTTTTGCTGAATGTACTGA  297
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGTACAAGGGTCATGTGCTAGCTGCCCTTTGTTTTGCTGAATGTACTGA  283

seq1  ATATTATGGACAGACATGCCTAAATTTTTCAACGACTAGCATGTGTATGT  347
      || |||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTATGGACAGACATGCCTAAATTTTTCAACGACTAGCATGTGTATGT  333

seq1  TAAGGAGATCCCCAGTTTTGACAAATTAATAACATTGGCTCACTTTTGTA  397
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAGGAGATCCCCAGTTTTGACAAATTAATAACATTGGCTCACTTTTGTA  383

seq1  CATTTTATGTTGAAATTCACAGGGAAGCTTCTTCTCTGTGAATGACTTTT  447
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTTATGTTGAAATTCACAGGGAAGCTTCTTCTCTGTGAATGACTTTT  433

seq1  ATATGAAGTGATTTAGCTCTTTCTTTTCTCTCTCTTCCTTCCTTCCTTCC  497
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATGAAGTGATTTAGCTCTTTCTTTTCTCTCTCTTCCTTCCTTCCTTCC  483

seq1  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTATTTATTTT  547
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCTTCCTTCCTTCCTTCCTTCCTTCCTTTCTTTCTTTCTATTTATTTT  533

seq1  ATGTATATGAGTACTCTGTTGTTGTCTTCAGACACACCAGAAGAGGGCAT  597
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTATATGAGTACTCTGTTGTTGTCTTCAGACACACCAGAAGAGGGCAT  583

seq1  TGATTCCATTGCAAATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGA  647
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGATTCCATTGCAAATGGTTGTGAGCCACCATGTGGTTGCTGGGAATTGA  633

seq1  ACTCAGGTCCTCGGGAAGAGCAGTCAGAGCTTTTAACTGCTGAGCCATCT  697
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTCAGGTCCTCGGGAAGAGCAGTCAGAGCTTTTAACTGCTGAGCCATCT  683

seq1  CTCCAGTCCGATTTAGCTGTTTCTAAGCTTTATGCACACCTGTATTTGCC  747
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCAGTCCGATTTAGCTGTTTCTAAGCTTTATGCACACCTGTATTTGCC  733

seq1  TGGTGATTTGAAGAAAGATGATACGAGGAGAGAAATTTTCAAGGAACAGT  797
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGTGATTTGAAGAAAGATGATACGAGGAGAGAAATTTTCAAGGAACAGT  783

seq1  CTTATTTAGAACCTACTTCAGATTATAATTGAAAGAAAGATGAAATTTCA  847
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTATTTAGAACCTACTTCAGATTATAATTGAAAGAAAGATGAAATTTCA  833

seq1  AGACTTGTAAGTCATTTAAAGTACTCAGAAATTGCTG-TTTTTTTTTTTT  896
      ||||||||||||||||||||||||||||||||||||| ||||||||||||
seq2  AGACTTGTAAGTCATTTAAAGTACTCAGAAATTGCTGTTTTTTTTTTTTT  883

seq1  TTTTTTTTTTTTTTTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAAAAA  946
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTTTTTTTTTTTTTGTGAGCCTAGAGGCTGCCTGGGGCTGAGAAAAA  933

seq1  AAGAAAAACAAACCTGGGTATGCCCCGTAGTTAAAACATTCCTGGGAACA  996
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAAAACAAACCTGGGTATGCCCCGTAGTTAAAACATTCCTGGGAACA  983

seq1  GCTTAACCTTAAAGATAAAGAAGAATGTGAGGATATAACAGGGCTATCTG  1046
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTAACCTTAAAGATAAAGAAGAATGTGAGGATATAACAGGGCTATCTG  1033

seq1  AACTGAGTCAACAACTCACAGAACTCTGACACCCTGCACGTACCTGTAAT  1096
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACTGAGTCAACAACTCACAGAACTCTGACACCCTGCACGTACCTGTAAT  1083

seq1  TTTTCTGCTGATGTTTGAGTAAGCCAATAGTGTGTTGCTATGCTGAATTC  1146
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTCTGCTGATGTTTGAGTAAGCCAATAGTGTGTTGCTATGCTGAATTC  1133

seq1: chr16_15471591_15472369
seq2: B6Ng01-122F06.g_66_847

seq1  GAATTCTTTTCAAAATCAACACAGCCAATGAACCAGAATCTTACCCTCAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTTTTCAAAATCAACACAGCCAATGAACCAGAATCTTACCCTCAT  50

seq1  CTAACGTCTGTGCCACCCTCCAAGCAGAACCATTCTTCATCGAAACAATT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAACGTCTGTGCCACCCTCCAAGCAGAACCATTCTTCATCGAAACAATT  100

seq1  GATGAATGACTTCATTGGATAGACCATCTTAATACACACACCATTTCTTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGAATGACTTCATTGGATAGACCATCTTAATACACACACCATTTCTTA  150

seq1  AATGAATGTAACCTGTTTCCTGAAAATGATGACAATCACTCAAGTCAAAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGAATGTAACCTGTTTCCTGAAAATGATGACAATCACTCAAGTCAAAT  200

seq1  AGCTTTGACCGGAGCAGGAAATCTGAATCCAAAAGAAATGCCTACAATTC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTTTGACCGGAGCAGGAAATCTGAATCCAAAAGAAATGCCTACAATTC  250

seq1  ATTCCTTGGTGCAGCAGAACTGTCAACTCTTAGCTTATCTACTATGGAGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTCCTTGGTGCAGCAGAACTGTCAACTCTTAGCTTATCTACTATGGAGG  300

seq1  TAAAATTCTTTGGTGATGTGAAGGACATTCAAGTACAGCCTTATTACAAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAAAATTCTTTGGTGATGTGAAGGACATTCAAGTACAGCCTTATTACAAT  350

seq1  GAACTCCAATGTCCAAAAACTGTTCTTATGTTGTGTTTGTACCACAGTAA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAACTCCAATGTCCAAAAACTGTTCTTATGTTGTGTTTGTACCACAGTAA  400

seq1  GAGCCAAGAATCTAAGCTCTACTAAAAATAAAACAAACAAAGAAACAAAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCCAAGAATCTAAGCTCTACTAAAAATAAAACAAACAAAGAAACAAAA  450

seq1  AGACTTTATCTATTTATATTCATTAAAAAACATGGTGATGGGGTGGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTTTATCTATTTATATTCATTAAAAAACATGGTGATGGGGTGGGTGG  500

seq1  CTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATGGGGGACTTTTGGTATAGCATTGGAAATGTAAATGAGCTAAATACC  550

seq1  TAATAAAAAATGGAAAAAAAAACATGGTGATATTTT-AAAATATCATACA  599
      |||||||||||||||||||||||||||||||||||| |||||||||||||
seq2  TAATAAAAAATGGAAAAAAAAACATGGTGATATTTTAAAAATATCATACA  600

seq1  GTTGATATATTTGCAGTTATTTAAAATTTTTATTGAGAAAAATGTATGTA  649
      |||||||||||||||||||||||||| |||||||||||||||||||||||
seq2  GTTGATATATTTGCAGTTATTTAAAA-TTTTATTGAGAAAAATGTATGTA  649

seq1  TTTTCAGTA-TTGCTGTAG-AAAAACATCTACATAAGACTGTTCAA-TTG  696
      ||||||||| ||||||||| |||||||||||||||||||||||||| |||
seq2  TTTTCAGTATTTGCTGTAGAAAAAACATCTACATAAGACTGTTCAATTTG  699

seq1  ATTGTTG-TTTTATATCAAACAACTTTTATAATACTCATTTTTATTGTTA  745
      ||||||| ||||||||||||||||||||||||||||||||||||||| ||
seq2  ATTGTTGTTTTTATATCAAACAACTTTTATAATACTCATTTTTATTG-TA  748

seq1  CAAT-ATTTTATAAATTTTAAAGAATATGATAAAA  779
      |||| ||||||| ||||||||||| ||||||||||
seq2  CAATAATTTTAT-AATTTTAAAGATTATGATAAAA  782