BAC Information

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BAC

Clone NameB6Ng01-126E22
Chromosome16 (Build37)
Map Location 5,159,155 - 5,280,022
singlet/doubletdoublet
Overlap geneSec14l5, Nagpa, AU021092, Alg1, 5730409G15Rik
Upstream geneCrebbp, EG436332, Adcy9, EG620313, Srl, Tcfap4, Glis2, Magmas, Coro7, Vasn, Dnaja3, Nmral1, Hmox2, 5730403B10Rik, 4930562C15Rik, 1500031H01Rik, Mgrn1, Nudt16l1, Anks3, 4930451G09Rik, Sept12, EG432995, Rogdi, 3930401K13Rik, Ubn1, Ppl
Downstream geneLOC100042436, A2bp1, LOC100042445
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-126E22.bB6Ng01-126E22.g
ACCDH928709DH928710
length439505
definitionDH928709|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E22, 5' end.DH928710|Mus musculus domesticus DNA, BAC clone: B6Ng01-126E22, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(5,279,578 - 5,280,022)(5,159,155 - 5,159,665)
sequence
aatttaagctacaacatgaaagttattttgttgaataaaacataacgcaa
taatgagcttgtgtgtgtcaaccctctgggggaggcagtaatagctggag
agagcatccttccctctccccatctctcaggctcattagagtaatagata
acacatagagagcttcatctagaattaagggccttccctgccactgtgca
gcctgggagagtgcaagagaagacaagggactggcttgggagcccttgct
cccactacctatctagaaaagacttttctgagaatcgttttcttaaatat
ttcacaatggaaggcttaaagacaaagttattgtagtggttgctcaatcc
tatccacacagccttaattaatgtccctctccactaggcaatgggtgttg
ttgttgttgttgttgttgttgttgttgttgttgttgttg
tcccagtgggaagcaggccatccattggctgtggtgccaagcttgtgacc
tgtcctctctccctgggtgccgttcaggtgggaccatggcatggggatat
gggttccttgactgcaaattgttatttcttcaccaaaggtggagccgggg
atggagctgagaatttctggaggaagcgggccatggttagacagcgcccc
atgtctatcactgcgagtgctgattagagctgtcaaggaaatgaatgggc
cgaaaggatggagaggaggcagctgtgcaggggaggtgcctgggatgaat
ccctggaagaagggtagctccttccagaaagtcccagtgactcatccctc
ccgctcttctcgtctttgatagatgagcttttcaagcctggaacagcagg
tgcaaggacccatagcaggacacgctggatgcgttccagaaccaacaagg
ccagtgtggccaggacagggcagggggtcaggggacaggggtgggggtgg
ggagg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_5279578_5280022
seq2: B6Ng01-126E22.b_43_487 (reverse)

seq1  CAACAACAACAACAACAACAACAACAACAACAACAACAACAACACCCATT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAACAACAACAACAACAACAACAACAACAACAACAACAACAACACCCATT  50

seq1  GCCTAGTGGAGAGGGACATTAATTAAGGCTGTGTGGATAGGATTGAGCAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCCTAGTGGAGAGGGACATTAATTAAGGCTGTGTGGATAGGATTGAGCAA  100

seq1  CCACTACAATAACTTTGTCTTTAAGCCTTCCATTGTGAAATATTTAAGAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCACTACAATAACTTTGTCTTTAAGCCTTCCATTGTGAAATATTTAAGAA  150

seq1  AACGATTCTCAGAAAAGTCTTTTCTAGATAGGTAGTGGGAGCAAGGGCTC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AACGATTCTCAGAAAAGTCTTTTCTAGATAGGTAGTGGGAGCAAGGGCTC  200

seq1  CCAAGCCAGTCCCTTGTCTTCTCTTGCACTCTCCCAGGCTGCACAGTGGC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAAGCCAGTCCCTTGTCTTCTCTTGCACTCTCCCAGGCTGCACAGTGGC  250

seq1  AGGGAAGGCCCTTAATTCTAGATGAAGCTCTCTATGTGTTATCTATTACT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAGGCCCTTAATTCTAGATGAAGCTCTCTATGTGTTATCTATTACT  300

seq1  CTAATGAGCCTGAGAGATGGGGAGAGGGAAGGATGCTCTCTCCAGCTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAATGAGCCTGAGAGATGGGGAGAGGGAAGGATGCTCTCTCCAGCTATT  350

seq1  ACTGCCTCCCCCAGAGGGTTGACACACACAAGCTCATTATTGCGTTATGT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGCCTCCCCCAGAGGGTTGACACACACAAGCTCATTATTGCGTTATGT  400

seq1  TTTATTCAACAAAATAACTTTCATGTTGTAGCTTAAATTGAATTC  445
      |||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAACAAAATAACTTTCATGTTGTAGCTTAAATTGAATTC  445

seq1: chr16_5159155_5159665
seq2: B6Ng01-126E22.g_68_578

seq1  GAATTCTCCCAGTGGGAAGCAGGCCATCCATTGGCTGTGGTGCCAAGCTT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTCCCAGTGGGAAGCAGGCCATCCATTGGCTGTGGTGCCAAGCTT  50

seq1  GTGACCTGTCCTCTCTCCCTGGGTGCCGTTCAGGTGGGACCATGGCATGG  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGACCTGTCCTCTCTCCCTGGGTGCCGTTCAGGTGGGACCATGGCATGG  100

seq1  GGATATGGGTTCCTTGACTGCAAATTGTTATTTCTTCACCAAAGGTGGAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATATGGGTTCCTTGACTGCAAATTGTTATTTCTTCACCAAAGGTGGAG  150

seq1  CCGGGGATGGAGCTGAGAATTTCTGGAGGAAGCGGGCCATGGTTAGACAG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCGGGGATGGAGCTGAGAATTTCTGGAGGAAGCGGGCCATGGTTAGACAG  200

seq1  CGCCCCATGTCTATCACTGCGAGTGCTGATTAGAGCTGTCAAGGAAATGA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGCCCCATGTCTATCACTGCGAGTGCTGATTAGAGCTGTCAAGGAAATGA  250

seq1  ATGGGCCGAAAGGATGGAGAGGAGGCAGCTGTGCAGGGGAGGTGCCTGGG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGGCCGAAAGGATGGAGAGGAGGCAGCTGTGCAGGGGAGGTGCCTGGG  300

seq1  ATGAATCCCTGGAAGAAGGGTAGCTCCTTCCAGAAAGTCCCAGTGACTCA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATCCCTGGAAGAAGGGTAGCTCCTTCCAGAAAGTCCCAGTGACTCA  350

seq1  TCCCTCCCGCTCTTCTCGTCTTTGATAGATGAGCTTTTCAAGCCTGGAAC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCTCCCGCTCTTCTCGTCTTTGATAGATGAGCTTTTCAAGCCTGGAAC  400

seq1  AGCAGGTGCAAGGACCCATAGCAGGACACGCTGGATGCGTTCCAGAACCA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCAGGTGCAAGGACCCATAGCAGGACACGCTGGATGCGTTCCAGAACCA  450

seq1  ACAAGGCCAGTGTGGCCAGGACAGGGCAGGGGGTCAGGGGACAGGGGTGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAAGGCCAGTGTGGCCAGGACAGGGCAGGGGGTCAGGGGACAGGGGTGG  500

seq1  GGGTGGGGAGG  511
      |||||||||||
seq2  GGGTGGGGAGG  511