BAC Information

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BAC

Clone NameB6Ng01-127I05
Chromosome16 (Build37)
Map Location 83,619,118 - 83,620,267
singlet/doubletsinglet
Overlap genenone
Upstream geneEG545172, LOC100039572
Downstream geneEG621729, LOC640489, LOC665664, LOC547311, LOC100039893
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-127I05.bB6Ng01-127I05.g
ACCDH929611DH929612
length1,155296
definitionDH929611|Mus musculus domesticus DNA, BAC clone: B6Ng01-127I05, 5' end.DH929612|Mus musculus domesticus DNA, BAC clone: B6Ng01-127I05, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcctctgcttcacctcaaattaactccaggaatttaaaagataaaa
tatattggctccttcttattccctaacttcaacttgcctctgctgcatga
atagaatggacctgaactcaactccactgcttcctgtgctgactgtctga
actgaattcaactgacttaactctcaactgactgacagaaccgaatggca
atatagctcaggagatcttcatgactctgtctcttgtaggcagccatcaa
gatcaaaggtgtatatcaccatgcattggcctaagctattctttgcttaa
cttgcactgtactgggatggccttgaaatcagagatcaacttgcctctct
ctcctggaattaaagatgtgtctgtattccagccagatcacacagatgta
gaaaggccctggatttgaggccttatgagagcagccatgttgctggatta
aaattcctctacaaaatattaaataatcccatggaaaaaaatcatcacaa
tataatttatattttagaaatataatataaatagaattttggatgcttgt
atttcaaaatataaattaaaagacatgaagtaataacaaataaaagttat
aacatctcaaaaaaatttgacaatattaagtacttttagacaaatacata
taattgagagaccagaccaaatccgtctttggttctggctccattttaga
gaagctgacttaaagttgaacttgagttaacccccaagcctgaacgttca
ctagtctccagttcactccctaacaaccacccatgaggagggggaaaaaa
ggaaatcttggctccaagctgacagtctatgttatgcttgagactggttt
gcaggttactccctctctgttttctctgggcatctaaagagaactctatt
tcagtttttcctgctcaaaattattcttcaaacacttctcttgtgatagt
ctaaaaattctttggatagctcatctcttccagattataaacccaatcct
tttatttttacacattaatccaggcatttaccttcagtttccctttaaga
ttattctatgaaacaggcatcctgtgacccccaggtcccttaatttttaa
ggggagcagccagcaaccatttacctttacatttcataaaaaaattagaa
gatct

atgaaattcaaaagcaaatgggtggaaatagaaaatatcatccttagaga
ggaaacacagtcacaaaaagcacacagaatgtactcactgacaagttgag
attaggcagaaagttcaggatacaacacataaaccatatgaagctcaaga
aggaagaacggggtatggctgcttcagtcctgcttaaaaggaggaagaaa
ataatcataagaggtagagggatggagagactggagagacagggagaaga
gggaaagggggcagcattaggtgtgagtggagatgggagagaagtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_83619118_83620267
seq2: B6Ng01-127I05.b_49_1203 (reverse)

seq1  AGATCTCTAAATTTTTTTTTGAAATGTTAAAGGTAAATGGGTGCTTGCTG  50
      ||||||   ||||||||| ||||||| ||||||||||||| |||| ||||
seq2  AGATCTTCTAATTTTTTTATGAAATG-TAAAGGTAAATGGTTGCTGGCTG  49

seq1  -TCTCC-TAAAAATTAAGGGAC--TGGGGTCACAGGATG-CTGTTTCATA  95
       || || |||||||||||||||   |||||||||||||| ||||||||||
seq2  CTCCCCTTAAAAATTAAGGGACCTGGGGGTCACAGGATGCCTGTTTCATA  99

seq1  GAATAATC-TAAAGGGAAACTGGA-GTAAATGGCCTGGATTAATGTGTAA  143
      |||||||| ||||||||||||| | |||||| ||||||||||||||||||
seq2  GAATAATCTTAAAGGGAAACTGAAGGTAAAT-GCCTGGATTAATGTGTAA  148

seq1  AAATAAAA-GATTGGGTTTATAATCTGGAAGAGATGAGCTATCCAAAGAA  192
      |||||||| |||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAAGGATTGGGTTTATAATCTGGAAGAGATGAGCTATCCAAAGAA  198

seq1  CTTTTTAGACTATCACAAGAGAAGTGTTTGAAGAATAATTTTGAGCAGGA  242
       |||||||||||||||||||||||||||||||||||||||||||||||||
seq2  -TTTTTAGACTATCACAAGAGAAGTGTTTGAAGAATAATTTTGAGCAGGA  247

seq1  AAAACTGAAATAGAGTTCTCTTTAGATGCCCAGAGAAAACAGAGAGGGAG  292
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACTGAAATAGAGTTCTCTTTAGATGCCCAGAGAAAACAGAGAGGGAG  297

seq1  TAACCTGCAAACCAGTCTCAAGCATAACATAGACTGTCAGCTTGGAGCCA  342
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAACCTGCAAACCAGTCTCAAGCATAACATAGACTGTCAGCTTGGAGCCA  347

seq1  AGATTTCCTTTTTTCCCCCTCCTCATGGGTGGTTGTTAGGGAGTGAACTG  392
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGATTTCCTTTTTTCCCCCTCCTCATGGGTGGTTGTTAGGGAGTGAACTG  397

seq1  GAGACTAGTGAACGTTCAGGCTTGGGGGTTAACTCAAGTTCAACTTTAAG  442
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGACTAGTGAACGTTCAGGCTTGGGGGTTAACTCAAGTTCAACTTTAAG  447

seq1  TCAGCTTCTCTAAAATGGAGCCAGAACCAAAGACGGATTTGGTCTGGTCT  492
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAGCTTCTCTAAAATGGAGCCAGAACCAAAGACGGATTTGGTCTGGTCT  497

seq1  CTCAATTATATGTATTTGTCTAAAAGTACTTAATATTGTCAAATTTTTTT  542
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCAATTATATGTATTTGTCTAAAAGTACTTAATATTGTCAAATTTTTTT  547

seq1  GAGATGTTATAACTTTTATTTGTTATTACTTCATGTCTTTTAATTTATAT  592
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATGTTATAACTTTTATTTGTTATTACTTCATGTCTTTTAATTTATAT  597

seq1  TTTGAAATACAAGCATCCAAAATTCTATTTATATTATATTTCTAAAATAT  642
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAAATACAAGCATCCAAAATTCTATTTATATTATATTTCTAAAATAT  647

seq1  AAATTATATTGTGATGATTTTTTTCCATGGGATTATTTAATATTTTGTAG  692
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATTATATTGTGATGATTTTTTTCCATGGGATTATTTAATATTTTGTAG  697

seq1  AGGAATTTTAATCCAGCAACATGGCTGCTCTCATAAGGCCTCAAATCCAG  742
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGAATTTTAATCCAGCAACATGGCTGCTCTCATAAGGCCTCAAATCCAG  747

seq1  GGCCTTTCTACATCTGTGTGATCTGGCTGGAATACAGACACATCTTTAAT  792
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCCTTTCTACATCTGTGTGATCTGGCTGGAATACAGACACATCTTTAAT  797

seq1  TCCAGGAGAGAGAGGCAAGTTGATCTCTGATTTCAAGGCCATCCCAGTAC  842
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCAGGAGAGAGAGGCAAGTTGATCTCTGATTTCAAGGCCATCCCAGTAC  847

seq1  AGTGCAAGTTAAGCAAAGAATAGCTTAGGCCAATGCATGGTGATATACAC  892
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGCAAGTTAAGCAAAGAATAGCTTAGGCCAATGCATGGTGATATACAC  897

seq1  CTTTGATCTTGATGGCTGCCTACAAGAGACAGAGTCATGAAGATCTCCTG  942
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTGATCTTGATGGCTGCCTACAAGAGACAGAGTCATGAAGATCTCCTG  947

seq1  AGCTATATTGCCATTCGGTTCTGTCAGTCAGTTGAGAGTTAAGTCAGTTG  992
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGCTATATTGCCATTCGGTTCTGTCAGTCAGTTGAGAGTTAAGTCAGTTG  997

seq1  AATTCAGTTCAGACAGTCAGCACAGGAAGCAGTGGAGTTGAGTTCAGGTC  1042
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTCAGTTCAGACAGTCAGCACAGGAAGCAGTGGAGTTGAGTTCAGGTC  1047

seq1  CATTCTATTCATGCAGCAGAGGCAAGTTGAAGTTAGGGAATAAGAAGGAG  1092
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTCTATTCATGCAGCAGAGGCAAGTTGAAGTTAGGGAATAAGAAGGAG  1097

seq1  CCAATATATTTTATCTTTTAAATTCCTGGAGTTAATTTGAGGTGAAGCAG  1142
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATATATTTTATCTTTTAAATTCCTGGAGTTAATTTGAGGTGAAGCAG  1147

seq1  AGGAATTC  1150
      ||||||||
seq2  AGGAATTC  1155


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