BAC Information

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BAC

Clone NameB6Ng01-129D21
Chromosome16 (Build37)
Map Location 47,488,256 - 47,489,071
singlet/doubletsinglet
Overlap genenone
Upstream genePvrl3, LOC628757
Downstream geneLOC628776, EG667741, EG639644, EG637273, Dppa4, Dppa2, EG433023, Morc1
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-129D21.bB6Ng01-129D21.g
ACCDH930880DH930881
length1,1181,114
definitionDH930880|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D21, 5' end.DH930881|Mus musculus domesticus DNA, BAC clone: B6Ng01-129D21, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcaaataaaaaaaatagtctgtttagctatgacaagtatgccgcta
ttgcttaagtagccacatcttgcttgacacgttaagagcatattatgcaa
tatccacaacagaataagactgttgatgacaattttccttaagcagcctc
catgggacctcaattactagaaaagctagccctcaatgagggacttttct
catcagtccaaatctgctttctgcaagttctacagtccacaatatgtgat
atctttagtaatagcatcttagtttctaattctggaatgctacccaaagc
accgcactagccttacagtttttgaaactttagagactaatctatttaag
aattcacaagaatctgggttgtctaattttatgtcaatttgacccaagca
tttggaagagggaacctcaattgagaaagtttctacactagactggcctg
tgggcatgctatgccttggttgatggttgatgtgagagggctgacctcat
tgtggatgattctatccatgaggtggtatcctgtgtgttgtaagaaaaca
ggatgagtaagccatgcagagcaaaccagcatgacttctccaaggcttct
ttgtcagtttctgccttaagttcttgcttaagttccctggatgatgtagt
atcagctgtataatgaagtaaactctttcctccccaagttgctttcagtc
atgatattttatcacagcaatggaaactttaactaagtcaaatgatacta
tgcccatgaagctgggattttctccgctaatcttatggctcctgaacatg
tctttttccacccatgaaagtattttcattcaaactccttagcttttatt
tttaccaccctatgagattgttttcaaaatttagatagaaaaggtttaga
actgtataatgaaggatttttatagaagtgacagagtttctggaggctta
cttgtgcccactctaaataagtacacttagttacagatactgtagcttgt
agaggaatgaaaagtgaagagagaaaaaaatgcctagttcaatcttgcag
taagatgcactaatggctcaaagctcaacccattttagcctcatagtaca
agtaattgttcatgaact
gaattcattaattgtttaacatttctgatttaacagtttaaaatttggat
tcttgcctaaagggcttaaatattactttattataagctcaatttaccaa
gacatagtctatagcattatattacttgaattaagaatgagattaatgta
acagtcttaaaatattttagaattttaccctacaaggcttgtcttaaaac
gttgattttctacacttactataaatatatttatttgtttttctgtgaac
gttaaaaatattccatgtattaaatatgttcaagtcagtatggctaatgt
atatattaataccaatagaataaagaagaaacagaaacatctcaatcaat
tgataaagacattgaacatacaggaatttatatgtggcaaagaagtaata
tataaaatttcaaaggtttgcattttaaagaacttgaaaatatcatcttg
agtgaggtaacccagccattgaagaacacacatgatatgtactcactgat
aagtgtatattagcccaaaagttcagaacacctaaaattctactcacaga
ccatatgaagctcaaaaagaaggaaaaccaaagtttggacatttcagtcc
ttcttagaagggagaacaaaacactcacaggaggaaatatggagacaaag
tgtagagcagagactgaaggaaaggccacccagagactgccccacctggg
ggatccatcccatatgcagtcaccaaacctggacgctattgcagatgctc
ggaagtgctttctgacaggagcctgatagtttgtctcctgagaggttctg
ccagagcctgacaaatacagaggtggaagttcacagccaaccattggact
gagcatgggagtcccaatggaggatttggataaggactgaaggagctgag
ggagattgcagaactttgaggggagcagcagtatcaacaggccagacctc
tcagagctcccggggactgactaccaacaaagagtacacatgggaagacc
catggcttctgcttgaaatgttggaagagatgctgttggacatcactgag
agagcactttggctcgtggggggtcgatttccagtgtagggatattccag
ggctagaatggcat
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_47488256_47489071
seq2: B6Ng01-129D21.b_360_1164

seq1  TACAGTTTTTGAAACTTTAGAGACTAATCTATTTAAGAATTCACAAGAAT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACAGTTTTTGAAACTTTAGAGACTAATCTATTTAAGAATTCACAAGAAT  50

seq1  CTGGGTTGTCTAATTTTATGTCAATTTGACCCAAGCATTTGGAAGAGGGA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGGTTGTCTAATTTTATGTCAATTTGACCCAAGCATTTGGAAGAGGGA  100

seq1  ACCTCAATTGAGAAAGTTTCTACACTAGACTGGCCTGTGGGCATGCTATG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTCAATTGAGAAAGTTTCTACACTAGACTGGCCTGTGGGCATGCTATG  150

seq1  CCTTGGTTGATGGTTGATGTGAGAGGGCTGACCTCATTGTGGATGATTCT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTGGTTGATGGTTGATGTGAGAGGGCTGACCTCATTGTGGATGATTCT  200

seq1  ATCCATGAGGTGGTATCCTGTGTGTTGTAAGAAAACAGGATGAGTAAGCC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCATGAGGTGGTATCCTGTGTGTTGTAAGAAAACAGGATGAGTAAGCC  250

seq1  ATGCAGAGCAAACCAGCATGACTTCTCCAAGGCTTCTTTGTCAGTTTCTG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGCAGAGCAAACCAGCATGACTTCTCCAAGGCTTCTTTGTCAGTTTCTG  300

seq1  CCTTAAGTTCTTGCTTAAGTTCCCTGGATGATGTAGTATCAGCTGTATAA  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCTTAAGTTCTTGCTTAAGTTCCCTGGATGATGTAGTATCAGCTGTATAA  350

seq1  TGAAGTAAACTCTTTCCTCCCCAAGTTGCTTTCAGTCATGATATTTTATC  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAAGTAAACTCTTTCCTCCCCAAGTTGCTTTCAGTCATGATATTTTATC  400

seq1  ACAGCAATGGAAACTTTAACTAAGTCAAATGATACTATGCCCATGAAGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACAGCAATGGAAACTTTAACTAAGTCAAATGATACTATGCCCATGAAGCT  450

seq1  GGGATTTTCTCCGCTAATCTTATGGCTCCTGAACATGTCTTTTTCCACCC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGATTTTCTCCGCTAATCTTATGGCTCCTGAACATGTCTTTTTCCACCC  500

seq1  ATGAAAGTATTTTCATTCAAACTCCTTAGCTTTTATTTTTACCACCCTAT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAAAGTATTTTCATTCAAACTCCTTAGCTTTTATTTTTACCACCCTAT  550

seq1  GAGATTGTTTTCAAAATTTAGATAGAAAAGGTTTAGAACTGTATAATGAA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGATTGTTTTCAAAATTTAGATAGAAAAGGTTTAGAACTGTATAATGAA  600

seq1  GGATTTTTATAGAAGGTGGACAGAGTTTCTGGAGGCTTACTTGTGCCCAC  650
      |||||||||||||||   ||||||||||||||||||||||||||||||||
seq2  GGATTTTTATAGAAG--TGACAGAGTTTCTGGAGGCTTACTTGTGCCCAC  648

seq1  TCTAAATAAGTACCACTTAGTTACAGGATACTGTAGCTGTAAGAAGAAAT  700
      |||||||||||| |||||||||||| ||||||||||||   || || |||
seq2  TCTAAATAAGTA-CACTTAGTTACA-GATACTGTAGCTTGTAG-AGGAAT  695

seq1  GAAAAGTGAAGAGAGAAAAAAATGCCAAGTCCAATCTTGCAGTTAAAGAT  750
      |||||||||||||||||||||||||| ||| ||||||||||||  |||||
seq2  GAAAAGTGAAGAGAGAAAAAAATGCCTAGTTCAATCTTGCAGT--AAGAT  743

seq1  GCCACTAATGGCTCAAAGGCTCAACCCAATCTAGGCTCCATAGTCAACAG  800
      | ||||||||||||||| |||||||||| | ||| || |||||| |  ||
seq2  G-CACTAATGGCTCAAA-GCTCAACCCATTTTAGCCT-CATAGT-ACAAG  789

seq1  TTATTGTTCATGAACT  816
      | ||||||||||||||
seq2  TAATTGTTCATGAACT  805