BAC Information

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BAC

Clone NameB6Ng01-132L11
Chromosome16 (Build37)
Map Location 70,312,518 - 70,401,741
singlet/doubletdoublet
Overlap geneGbe1
Upstream geneSpeer2, EG664930
Downstream geneD16Ertd519e, LOC100039231
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-132L11.bB6Ng01-132L11.g
ACCDH933447DH933448
length1,1611,026
definitionDH933447|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L11, 5' end.DH933448|Mus musculus domesticus DNA, BAC clone: B6Ng01-132L11, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(70,400,529 - 70,401,741)(70,312,518 - 70,313,553)
sequence
gaattcaatccctgaggcaagcacagcagaaaggacaaaccaatcctacc
atctgatccaggacttcattacacataccttaatacagacagacatgcac
agacacacatacatgcctacatacatgtacctaaatataagtaaaaataa
ttttaaaacgcttctaaaagttcatcttcagtttcctcaaatcaaacaca
aattttagcatttgcaaatgcacttccacattttaatctatttatcagta
aacataaagttaaaaagtcattttaaattaacaccaacaaaggaaaatta
catgagaaagaaagaacatcctagtctattagataaggtgcacgcatggt
cataaaagtttattgaaataattcttatgtacccaaattcatgagaacat
gaattagctcaaataaaatatacagaaatagctcaaataaaatacagaga
aatgcatcaaagataaaggtagagagttaacctcgaatacagagcaatgg
ctcactatgctcctgatgaaggagaacctcccctaggaacaagagtcaac
ccttgcacacagagaagcatcacagctacaacacttaagccaataggaaa
gcgactggttatgcttactgcaaataagagaaacacacccctaaatcatt
cccgcctgtatgccaaacctgacaaagctgtagaatccctaggaagaaaa
caaactgagaaaggtgtttacaaacttagaatggatagggaagatttctg
tttctcaaatgatccatataccaaaaaaaaaaaaacaaaaaaaacaaaaa
aaaacaaaaaaaaaacaaaaaaaccaattaattaattggttaattagtta
aatgttaaagaaaagactgctaaatttgatcactaaacataagctatctc
cctaatagactagcagtgcaatctaacacctgtattcaatcatttaggga
acaggagagaaacattgaaaaacataacacacgagcaaagacgaacaacc
gaaagaggagcaagaaaacatctagggaagagtaaagtttcgaatatcaa
catcatagactaaagagaactacgaagtatgacacctgaacactggtaaa
tatatatgagcagcaatttaatagccacagaacggtagcttagagatggg
cgaatacataa
gaattctgtcagatcctgaaagggccatgccactacagtacaagggaact
ggatagtgaaggtagtgactacaggttgtttaagtgttttaaggaaagcc
acgtttatatttcacacttaagtgaaacgtcatgccatttaaatttttac
tgagattatttgatgtgtactatagagtttagctattctaattatgtaaa
actggcagcatcagtatctcttgaacgtagttaaaaatatattctggtac
atggaccccaaactcagaatgcacattttcactaggtgactcatatcaag
gtcacattgggaaatactggtacagggagtgggtaaaaatggtaatttat
gggtgattatcagtctgtataaaagtgataaaagctgattttaggtagtg
tttattcaggaaaactttatttttattttctcaccccttcccttttccct
tcctaatcagtgctttggttttaccttaacaggtgaacgcttatgctatg
aagaagatagttggttcaggtttcttagtcagccaagtggaaatttcagt
gtgaagtgatgaaaatttagagttatgaaagtaaaaaatgaagttacaga
attgggtgtctactaggtactttatttctgggttcaagcccccccccatt
tgtagatatatatatacctttatctaagacctttagctattcacatcgaa
gtgaatatttttctttcttaagttcatcacaaaccctgttttaaatgttt
atatcccaaggctggtcaatactgttccttcttcctagacgctaagattt
tactacacttgatcttagccaaaaggccgagaagcgataggattttacat
ttccagatttcaactgagaaaattatactcaagcctgtccagttttgagg
tgcaaagtaacttgcagctctgagtagcagcgtccatttctcttgtgtca
aatctgtattctaaaaaaaattttttgtatgtctgtttttcagtaataat
gtggcaagtgaaaatatttgaagttg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_70400529_70401741
seq2: B6Ng01-132L11.b_48_1208 (reverse)

seq1  TTATGTCACTCGCCCATCTTCTAGGCTTTACTCGTTCTGTAGCTTATTTA  50
      |||||| | ||||||||| |||| ||  ||| |||||||| || ||||  
seq2  TTATGT-ATTCGCCCATC-TCTAAGC--TAC-CGTTCTGTGGC-TATT--  42

seq1  AAAATTGCTTGCTCATTATTATTATTTTTTACCAAGTTGTTTCAGTTGTT  100
       ||||||| |||||||   ||      |||||| |||   ||||| || |
seq2  -AAATTGC-TGCTCATATATA------TTTACC-AGT--GTTCAGGTG-T  80

seq1  CATACCTTCTGTAGTTTCCTCTTTTAGGTCCTTATTGGATGTTTGATATT  150
      |||| |||| ||||||  ||||||   |||  |||  |||| ||||||||
seq2  CATA-CTTC-GTAGTT--CTCTTT--AGTC--TAT--GATG-TTGATATT  119

seq1  CGGAAACTTTTACCTTCTTCCCCTAGATGTTTTCTTTGCCTTCTTCTTTT  200
      | ||||| |||||  |||| |||||||||||||| ||||  || || |||
seq2  C-GAAAC-TTTAC--TCTT-CCCTAGATGTTTTC-TTGC--TCCTC-TTT  160

seq1  CGGTTTGTTCGTTCCTTTGCTCCTTGTGTTATGTTTTTCAAATGTTTCTC  250
      ||| ||||||||  ||||||| | ||||||||||||||| ||||||||||
seq2  CGG-TTGTTCGT--CTTTGCT-CGTGTGTTATGTTTTTC-AATGTTTCTC  205

seq1  TCCTGTTCCCTAAATGATTGAATACAGGTGTTAGATTGCACTGCTAGTCT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGTTCCCTAAATGATTGAATACAGGTGTTAGATTGCACTGCTAGTCT  255

seq1  ATTAGGGAGATAAGCTTATGTTTTAGTGATCAAATTTAGCAGTCTTTTCT  350
      ||||||||||| |||||||| |||||||||||||||||||||||||||||
seq2  ATTAGGGAGAT-AGCTTATG-TTTAGTGATCAAATTTAGCAGTCTTTTCT  303

seq1  TTAACATTTTAACTAATTAACCAATTAATTAATTGGTTTTTTTTGTTTTT  400
      |||||| ||||||||||||||||||||||||||||||||||||   ||||
seq2  TTAACA-TTTAACTAATTAACCAATTAATTAATTGGTTTTTTT--GTTTT  350

seq1  TTTTTTGTTTTTTTTTTGTTTTTTTTTGTTTTTTTTTTTTTGGTATATGG  450
      ||||||||||||||||   |||||||||||||||||||||||||||||||
seq2  TTTTTTGTTTTTTTTT--GTTTTTTTTGTTTTTTTTTTTTTGGTATATGG  398

seq1  ATCATTTGAGAAACAGAAATCTTCCCTATCCATTCTAAGTTTGTAAACAC  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATTTGAGAAACAGAAATCTTCCCTATCCATTCTAAGTTTGTAAACAC  448

seq1  CTTTCTCAGTTTGTTTTCTTCCTAGGGATTCTACAGCTTTGTCAGGTTTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTTCTCAGTTTGTTTTCTTCCTAGGGATTCTACAGCTTTGTCAGGTTTG  498

seq1  GCATACAGGCGGGAATGATTTAGGGGTGTGTTTCTCTTATTTGCAGTAAG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCATACAGGCGGGAATGATTTAGGGGTGTGTTTCTCTTATTTGCAGTAAG  548

seq1  CATAACCAGTCGCTTTCCTATTGGCTTAAGTGTTGTAGCTGTGATGCTTC  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAACCAGTCGCTTTCCTATTGGCTTAAGTGTTGTAGCTGTGATGCTTC  598

seq1  TCTGTGTGCAAGGGTTGACTCTTGTTCCTAGGGGAGGTTCTCCTTCATCA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGTGTGCAAGGGTTGACTCTTGTTCCTAGGGGAGGTTCTCCTTCATCA  648

seq1  GGAGCATAGTGAGCCATTGCTCTGTATTCGAGGTTAACTCTCTACCTTTA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGAGCATAGTGAGCCATTGCTCTGTATTCGAGGTTAACTCTCTACCTTTA  698

seq1  TCTTTGATGCATTTCTCTGTATTTTATTTGAGCTATTTCTGTATATTTTA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTTGATGCATTTCTCTGTATTTTATTTGAGCTATTTCTGTATATTTTA  748

seq1  TTTGAGCTAATTCATGTTCTCATGAATTTGGGTACATAAGAATTATTTCA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTGAGCTAATTCATGTTCTCATGAATTTGGGTACATAAGAATTATTTCA  798

seq1  ATAAACTTTTATGACCATGCGTGCACCTTATCTAATAGACTAGGATGTTC  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAAACTTTTATGACCATGCGTGCACCTTATCTAATAGACTAGGATGTTC  848

seq1  TTTCTTTCTCATGTAATTTTCCTTTGTTGGTGTTAATTTAAAATGACTTT  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTCTTTCTCATGTAATTTTCCTTTGTTGGTGTTAATTTAAAATGACTTT  898

seq1  TTAACTTTATGTTTACTGATAAATAGATTAAAATGTGGAAGTGCATTTGC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTTTATGTTTACTGATAAATAGATTAAAATGTGGAAGTGCATTTGC  948

seq1  AAATGCTAAAATTTGTGTTTGATTTGAGGAAACTGAAGATGAACTTTTAG  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATGCTAAAATTTGTGTTTGATTTGAGGAAACTGAAGATGAACTTTTAG  998

seq1  AAGCGTTTTAAAATTATTTTTACTTATATTTAGGTACATGTATGTAGGCA  1100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGCGTTTTAAAATTATTTTTACTTATATTTAGGTACATGTATGTAGGCA  1048

seq1  TGTATGTGTGTCTGTGCATGTCTGTCTGTATTAAGGTATGTGTAATGAAG  1150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTATGTGTGTCTGTGCATGTCTGTCTGTATTAAGGTATGTGTAATGAAG  1098

seq1  TCCTGGATCAGATGGTAGGATTGGTTTGTCCTTTCTGCTGTGCTTGCCTC  1200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGATCAGATGGTAGGATTGGTTTGTCCTTTCTGCTGTGCTTGCCTC  1148

seq1  AGGGATTGAATTC  1213
      |||||||||||||
seq2  AGGGATTGAATTC  1161

seq1: chr16_70312518_70313553
seq2: B6Ng01-132L11.g_68_1093

seq1  GAATTCTGTCAGATCCTGAAAGGGCCATGCCACTACAGTACAAGGGAACT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCTGTCAGATCCTGAAAGGGCCATGCCACTACAGTACAAGGGAACT  50

seq1  GGATAGTGAAGGTAGTGACTACAGGTTGTTTAAGTGTTTTAAGGAAAGCC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAGTGAAGGTAGTGACTACAGGTTGTTTAAGTGTTTTAAGGAAAGCC  100

seq1  ACGTTTATATTTCACACTTAAGTGAAACGTCATGCCATTTAAATTTTTAC  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACGTTTATATTTCACACTTAAGTGAAACGTCATGCCATTTAAATTTTTAC  150

seq1  TGAGATTATTTGATGTGTACTATAGAGTTTAGCTATTCTAATTATGTAAA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGAGATTATTTGATGTGTACTATAGAGTTTAGCTATTCTAATTATGTAAA  200

seq1  ACTGGCAGCATCAGTATCTCTTGAACGTAGTTAAAAATATATTCTGGTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACTGGCAGCATCAGTATCTCTTGAACGTAGTTAAAAATATATTCTGGTAC  250

seq1  ATGGACCCCAAACTCAGAATGCACATTTTCACTAGGTGACTCATATCAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGGACCCCAAACTCAGAATGCACATTTTCACTAGGTGACTCATATCAAG  300

seq1  GTCACATTGGGAAATACTGGTACAGGGAGTGGGTAAAAATGGTAATTTAT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCACATTGGGAAATACTGGTACAGGGAGTGGGTAAAAATGGTAATTTAT  350

seq1  GGGTGATTATCAGTCTGTATAAAAGTGATAAAAGCTGATTTTAGGTAGTG  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGGTGATTATCAGTCTGTATAAAAGTGATAAAAGCTGATTTTAGGTAGTG  400

seq1  TTTATTCAGGAAAACTTTATTTTTATTTTCTCACCCCTTCCCTTTTCCCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTATTCAGGAAAACTTTATTTTTATTTTCTCACCCCTTCCCTTTTCCCT  450

seq1  TCCTAATCAGTGCTTTGGTTTTACCTTAACAGGTGAACGCTTATGCTATG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTAATCAGTGCTTTGGTTTTACCTTAACAGGTGAACGCTTATGCTATG  500

seq1  AAGAAGATAGTTGGTTCAGGTTTCTTAGTCAGCCAAGTGGAAATTTCAGT  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGAAGATAGTTGGTTCAGGTTTCTTAGTCAGCCAAGTGGAAATTTCAGT  550

seq1  GTGAAGTGATGAAAATTTAGAGTTATGAAAGTAAAAAATGAAGTTACAGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAAGTGATGAAAATTTAGAGTTATGAAAGTAAAAAATGAAGTTACAGA  600

seq1  ATTGGGTGTCTACTAGGTACTTTATTTCTGGGTTCAAGCCCCCCCCCATT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTGGGTGTCTACTAGGTACTTTATTTCTGGGTTCAAGCCCCCCCCCATT  650

seq1  TGTAGATATATATATACCTTTATCTAAGACCTTTAGCTATTCACATCGAA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGATATATATATACCTTTATCTAAGACCTTTAGCTATTCACATCGAA  700

seq1  GTGAATATTTTTCTTTCTTAAGTTCATCACAAACCCTGTTTTAAATGTTT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGAATATTTTTCTTTCTTAAGTTCATCACAAACCCTGTTTTAAATGTTT  750

seq1  ATATCCCAAGGCTGGTCAATACTGTTCCTTCTTCCTAGACGCTAAGATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATCCCAAGGCTGGTCAATACTGTTCCTTCTTCCTAGACGCTAAGATTT  800

seq1  TACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATAGGATTTTACAT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACTACACTTGATCTTAGCCAAAAGGCCGAGAAGCGATAGGATTTTACAT  850

seq1  TTCCAGATTTCAACTGAGAAAATTATACTCAAGCCTGTCCAGTTTTGAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCAGATTTCAACTGAGAAAATTATACTCAAGCCTGTCCAGTTTTGAGG  900

seq1  TGCAAAGTAACTTGCAGCCTCCTGAGTAGCAGCGTCCATTTCTCCTTGTG  950
      ||||||||||||||||||   |||||||||||||||||||||| ||||||
seq2  TGCAAAGTAACTTGCAGC--TCTGAGTAGCAGCGTCCATTTCT-CTTGTG  947

seq1  TCAAAATCTGTATTCTTAAAAAAAAATTTTTTTGTATGTCTGTGTATCAG  1000
      || |||||||||||||   ||||||| |||||||||||||||| | ||||
seq2  TC-AAATCTGTATTCT---AAAAAAAATTTTTTGTATGTCTGTTTTTCAG  993

seq1  TATATATGTGGCAGGGTGGAAAATATTTGAAAGTTG  1036
      ||   |||||||| |   ||||||||||| ||||||
seq2  TAATAATGTGGCAAG--TGAAAATATTTG-AAGTTG  1026