BAC Information

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BAC

Clone NameB6Ng01-133F17
Chromosome16 (Build37)
Map Location 46,839,596 - 46,840,612
singlet/doubletsinglet
Overlap genenone
Upstream genePhldb2, EG667418, Plcxd2, 4930546O09Rik, Cd96, AL024110, Pvrl3
Downstream geneLOC628757, LOC628776
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-133F17.bB6Ng01-133F17.g
ACCDH933924DH933925
length1,015802
definitionDH933924|Mus musculus domesticus DNA, BAC clone: B6Ng01-133F17, 5' end.DH933925|Mus musculus domesticus DNA, BAC clone: B6Ng01-133F17, 3' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctttcactctaaggaaccatcctaaccaccgagaaagacatacag
cagaaccataggatgatgagaggttccagagagatgattatccccctctt
tggcagtttcaacaatgcctaggacaaaaggatgagcatgaagaccctcc
aactctaccccaagcagcactcaaaataatagaatgtgtaagtgacctca
gggtaagcagagcaacatgggtattatccagaacaggagagaggctattt
ctctgagccactaaattataatagggtttactgtccactgagagatcaat
acaatgctctaagtgaatccaaaagtatgtttgggtaatattgcctttgt
ctctaagttccattcattaaaagtgattttcaaagcctaagcaatgcata
acactgacactaatgcatagtatatttacttggcagtaaggacttcagtt
tggtgttaagcatagagcagatattagacatttctctgaactaacaagga
atgtaacgccattacctccattccacattaattgctttgccaaaattaaa
aataaaaatgttttctgccaaccatgttttggctctcctgaaagtcatgg
agtttaggttttgttattgctgtttgttttcatgctggttggtaagtcca
tttgaaacatggatatcaaatatgccatctgcctctggtcgatgaaaggg
agccccttatgctttttaatttcatgttaagcctaaaatctttgacccaa
actcagagagttttaaaaactcaaaacgttaagaataaaaagccgtgtgt
caccatgaagacaacaaatccttgagcacacttgtgctgaaactaactta
caatcacttgagctaactatgaaactaacttcacccttgagctggccatg
tcatggcacttagttaagaactgaatgtgaccttcagaggtcactggttt
gatgcttaccaaatactgctttacatatactggctgttgtttgtctccta
tgtcatatttttccc

gaattcttccttaaaattctggtaaaattctgagataaatttatttgact
ctgggctctttttggttgggagacttatagatttgtttggtttcttatct
gatcttgatttaactttggcaagtgaaaataataagaaacttattcattt
cttttaggttttcaatttggtggagtacattttttaaagtatatcctaat
gagtctctggatttcctcactgtccattgctttgttaccctttcatctct
aaatttgttgatttggagcttgtctccccatctatgtgggtaagggttta
tcaatcttatttattttctcagagaactcagttttccttttattgattct
ttgtattgttttgttgtttgcttttattgtattatattgatttcagagtt
ttgctatttcttgctgtttactcattttgtgtttttttcttttgtcctag
agctttcatgtacgctgttaaggcacatgagatttctctgtttattttaa
acgtaggcacctatgctttgagtgtgcctcttcaaatgtgccttagaacg
aaccaccttcattgtgtccctttagtttttggtatgttgtgtatattcta
gaaagttttaatttctctttaatttctgccttgagccttttttttttaac
tcagtagtgagttttcagtttccatgggtttctgaggtttctgttgttga
tattcatctttattccataatggtctgttaggaggcatggtgttatttaa
ttttctttgtatcatttgtgagttgctttgtctgacacaaaaggttaagg
ga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_46839596_46840612
seq2: B6Ng01-133F17.b_48_1062 (reverse)

seq1  GGGAAAAATATGACATAGGAGAACAAAACAACAGCCAGTATATGTAAAGC  50
      ||||||||||||||||||||||   |||||||||||||||||||||||||
seq2  GGGAAAAATATGACATAGGAGA--CAAACAACAGCCAGTATATGTAAAGC  48

seq1  AGTATTTGGTAAGCATCAAACCAGTGACCTCTGAAGGTCACATTCAGTTC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTATTTGGTAAGCATCAAACCAGTGACCTCTGAAGGTCACATTCAGTTC  98

seq1  TTAACTAAGTGCCATGACATGGCCAGCTCAAGGGTGAAGTTAGTTTCATA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAACTAAGTGCCATGACATGGCCAGCTCAAGGGTGAAGTTAGTTTCATA  148

seq1  GTTAGCTCAAGTGATTGTAAGTTAGTTTCAGCACAAGTGTGCTCAAGGAT  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTAGCTCAAGTGATTGTAAGTTAGTTTCAGCACAAGTGTGCTCAAGGAT  198

seq1  TTGTTGTCTTCATGGTGACACACGGCTTTTTATTCTTAACGTTTTGAGTT  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTGTCTTCATGGTGACACACGGCTTTTTATTCTTAACGTTTTGAGTT  248

seq1  TTTAAAACTCTCTGAGTTTGGGTCAAAGATTTTAGGCTTAACATGAAATT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTAAAACTCTCTGAGTTTGGGTCAAAGATTTTAGGCTTAACATGAAATT  298

seq1  AAAAAGCATAAGGGGCTCCCTTTCATCGACCAGAGGCAGATGGCATATTT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAAGCATAAGGGGCTCCCTTTCATCGACCAGAGGCAGATGGCATATTT  348

seq1  GATATCCATGTTTCAAATGGACTTACCAACCAGCATGAAAACAAACAGCA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATATCCATGTTTCAAATGGACTTACCAACCAGCATGAAAACAAACAGCA  398

seq1  ATAACAAAACCTAAACTCCATGACTTTCAGGAGAGCCAAAACATGGTTGG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAACAAAACCTAAACTCCATGACTTTCAGGAGAGCCAAAACATGGTTGG  448

seq1  CAGAAAACATTTTTATTTTTAATTTTGGCAAAGCAATTAATGTGGAATGG  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAGAAAACATTTTTATTTTTAATTTTGGCAAAGCAATTAATGTGGAATGG  498

seq1  AGGTAATGGCGTTACATTCCTTGTTAGTTCAGAGAAATGTCTAATATCTG  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTAATGGCGTTACATTCCTTGTTAGTTCAGAGAAATGTCTAATATCTG  548

seq1  CTCTATGCTTAACACCAAACTGAAGTCCTTACTGCCAAGTAAATATACTA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCTATGCTTAACACCAAACTGAAGTCCTTACTGCCAAGTAAATATACTA  598

seq1  TGCATTAGTGTCAGTGTTATGCATTGCTTAGGCTTTGAAAATCACTTTTA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCATTAGTGTCAGTGTTATGCATTGCTTAGGCTTTGAAAATCACTTTTA  648

seq1  ATGAATGGAACTTAGAGACAAAGGCAATATTACCCAAACATACTTTTGGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGAATGGAACTTAGAGACAAAGGCAATATTACCCAAACATACTTTTGGA  698

seq1  TTCACTTAGAGCATTGTATTGATCTCTCAGTGGACAGTAAACCCTATTAT  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACTTAGAGCATTGTATTGATCTCTCAGTGGACAGTAAACCCTATTAT  748

seq1  AATTTAGTGGCTCAGAGAAATAGCCTCTCTCCTGTTCTGGATAATACCCA  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTAGTGGCTCAGAGAAATAGCCTCTCTCCTGTTCTGGATAATACCCA  798

seq1  TGTTGCTCTGCTTACCCTGAGGTCACTTACACATTCTATTATTTTGAGTG  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTTGCTCTGCTTACCCTGAGGTCACTTACACATTCTATTATTTTGAGTG  848

seq1  CTGCTTGGGGTAGAGTTGGAGGGTCTTCATGCTCATCCTTTTGTCCTAGG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCTTGGGGTAGAGTTGGAGGGTCTTCATGCTCATCCTTTTGTCCTAGG  898

seq1  CATTGTTGAAACTGCCAAAGAGGGGGATAATCATCTCTCTGGAACCTCTC  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGTTGAAACTGCCAAAGAGGGGGATAATCATCTCTCTGGAACCTCTC  948

seq1  ATCATCCTATGGTTCTGCTGTATGTCTTTCTCGGTGGTTAGGATGGTTCC  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCATCCTATGGTTCTGCTGTATGTCTTTCTCGGTGGTTAGGATGGTTCC  998

seq1  TTAGAGTGAAAGAATTC  1017
      |||||||||||||||||
seq2  TTAGAGTGAAAGAATTC  1015


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