BAC Information

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BAC

Clone NameB6Ng01-136F08
Chromosome16 (Build37)
Map Location 81,882,083 - 81,883,240
singlet/doubletsinglet
Overlap genenone
Upstream geneLOC100039724, Ncam2, LOC621470, LOC435484
Downstream genePgk1-ps1, EG665260
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-136F08.bB6Ng01-136F08.g
ACCDH936132DH936133
length1,2571,142
definitionDH936132|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F08, 5' end.DH936133|Mus musculus domesticus DNA, BAC clone: B6Ng01-136F08, 3' end.
singlet/doublet---singlet
BLAST hitno hit dataunique
sequence
gaattctcaacagcagaatctcaaaaagtagacagcatcctcagccctca
gggaaaggccaatcaaaatgacttggaaattccatcagactctcctgtca
gaatggctaagattaagaacacaaggaacagctgatgctggtttggatgt
ggagcaaagggaacactcttcctttgctagtgggaatgcaaaattgtaag
cttttatgggaagcaatatggaggtttattagaaattgagaatcgattta
cttcaagacccatttataccattcttgtgcatatgtccaatggacactcc
attatgattataatacaaggatttttttttaatcaaaatatcaaacattc
aattttccaataaaacctggagaactagatgctgaggtgaaagcctacta
gctttcaaattgaacgtcccttctttttccttcctgtgcatttctctacc
catcctcactacttcctcttattctctgtttttgtttttgttttttctat
gtttactacctgtcaactggttgcttggtatgactcttgagctatgattg
actttgtttaatcaggaaacacatgaattaaaggagtatgctagggctaa
aaactaaaaacaggtttttccagtatataatttctgagttcacagacatc
ttgcaaacaagaacacttgttcagctatgttcatagaagctttattcata
atagctggaaactaaaaacaacctaggtgtttctcaactgaagaatgtgc
tatatttacataatagagtattactcagctggtaaaaaatcataaaattt
gttgtcaaatggatgaaactagtaaaaaaaatcatgttaaatgacatatc
ctcaacccagaaacacaaaaaataataggtgcctggcccaactgccatca
gagaaactttaatcagcaactaagaaaactgatgctgagacctacagcct
aactttagaaggatttcatggaattctagtggaagagggaaaggagacta
taggagccagaaagtacaccacaagaatatggctacagaatctttatctg
ggctgtagagacttggagatactgaacacaacaggaagctgcagaactga
ctaggcctctgctatttgtaacaattgatatctagtcttctttgcaggac
tctacaccggaacaggaacctgtccactgcctgccatggcacctcacttt
ttatatgggtgtcctggcaagcatatgtgaatgggagaggttatatcttt
atggaac
gaattcaataccagcactcaggagacagaggcaggcagaactctgtgagg
tctaggccaggctcgtctacaaagtgagttccaggacttccagggatgtt
aaacatggaaaccttgtcttggaaaaacaaaccaaaaacaaacaaacaaa
aaaaccacattgttaaagaatatagtggcctgaggtatttctttagagga
cacatttcaccatgagaccattcctccccttagctgttgcttgactctta
ggtaaacatctctgttccagtgttcccttcttcatgaagctaggattagc
atagggccacatacattagaacatgacaacagaattaaaacctctaaaac
tgctagccaaacatgcgtatttcttctgaaactgttcttctcagttactt
tcccaattccaactaaaaagtgaataccacagtcattttacaatgacgct
tagtatagacagatgacacctttgcataattaactgtgaagaaattttca
agtggctcctaaaaagcttcaaaataattcttttgcattataagttacta
atcacacagaaatataaattctactagttttatatctcaaactaaagtga
gttttgtaatcttccatttaataaaatgctgcagtttcattgtattttga
gtctcatcattgattccattgtcagtatgatttgatcataggacatatga
ttgaatcgtagaacttctagttcattcaatggacattgaaaactcatgca
agttgtgcttttcaagaccagacttgtacaagtttgatcctgtcaaattt
tcgttaaacacgggcaatgggcacctgattctccatcattccttgaggga
ctattacatgttgaagattgttagggataaagtatgcccctaccataatg
tacccacgttgctatggtgcagcaaataacttcccaccaaacatgtgcag
aagtctcgataatttagtgggtcacatatacaggaggtctgaagtaggac
ttttgagaaggcttctagtggaagatggaatacatgagaaatgataatgc
tagtgcaagtaaatgagtaaattaatttatgaatggaattaaaccaaaac
aagagtaggagtcaaggatagtgaaacatttttattaaaaaa
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_81882083_81883240
seq2: B6Ng01-136F08.g_67_1208

seq1  GAATTCAATACCAGCACTCAGGAGACAGAGGCAGGCAGAACTCTGTGAGG  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAATTCAATACCAGCACTCAGGAGACAGAGGCAGGCAGAACTCTGTGAGG  50

seq1  TCTAGGCCAGGCTCGTCTACAAAGTGAGTTCCAGGACTTCCAGGGATGTT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTAGGCCAGGCTCGTCTACAAAGTGAGTTCCAGGACTTCCAGGGATGTT  100

seq1  AAACATGGAAACCTTGTCTTGGAAAAACAAACCAAAAACAAACAAACAAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGAAACCTTGTCTTGGAAAAACAAACCAAAAACAAACAAACAAA  150

seq1  AAAACCACATTGTTAAAGAATATAGTGGCCTGAGGTATTTCTTTAGAGGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAACCACATTGTTAAAGAATATAGTGGCCTGAGGTATTTCTTTAGAGGA  200

seq1  CACATTTCACCATGAGACCATTCCTCCCCTTAGCTGTTGCTTGACTCTTA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACATTTCACCATGAGACCATTCCTCCCCTTAGCTGTTGCTTGACTCTTA  250

seq1  GGTAAACATCTCTGTTCCAGTGTTCCCTTCTTCATGAAGCTAGGATTAGC  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGTAAACATCTCTGTTCCAGTGTTCCCTTCTTCATGAAGCTAGGATTAGC  300

seq1  ATAGGGCCACATACATTAGAACATGACAACAGAATTAAAACCTCTAAAAC  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATAGGGCCACATACATTAGAACATGACAACAGAATTAAAACCTCTAAAAC  350

seq1  TGCTAGCCAAACATGCGTATTTCTTCTGAAACTGTTCTTCTCAGTTACTT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCTAGCCAAACATGCGTATTTCTTCTGAAACTGTTCTTCTCAGTTACTT  400

seq1  TCCCAATTCCAACTAAAAAGTGAATACCACAGTCATTTTACAATGACGCT  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCCAATTCCAACTAAAAAGTGAATACCACAGTCATTTTACAATGACGCT  450

seq1  TAGTATAGACAGATGACACCTTTGCATAATTAACTGTGAAGAAATTTTCA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTATAGACAGATGACACCTTTGCATAATTAACTGTGAAGAAATTTTCA  500

seq1  AGTGGCTCCTAAAAAGCTTCAAAATAATTCTTTTGCATTATAAGTTACTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTGGCTCCTAAAAAGCTTCAAAATAATTCTTTTGCATTATAAGTTACTA  550

seq1  ATCACACAGAAATATAAATTCTACTAGTTTTATATCTCAAACTAAAGTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCACACAGAAATATAAATTCTACTAGTTTTATATCTCAAACTAAAGTGA  600

seq1  GTTTTGTAATCTTCCATTTAATAAAATGCTGCAGTTTCATTGTATTTTGA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTTTGTAATCTTCCATTTAATAAAATGCTGCAGTTTCATTGTATTTTGA  650

seq1  GTCTCATCATTGATTCCATTGTCAGTATGATTTGATCATAGGACATATGA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCTCATCATTGATTCCATTGTCAGTATGATTTGATCATAGGACATATGA  700

seq1  TTGAATCGTAGAACTTCTAGTTCATTCAATGGACATTGAAAACTCATGCA  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGAATCGTAGAACTTCTAGTTCATTCAATGGACATTGAAAACTCATGCA  750

seq1  AGTTGTGCTTTTCAAGACCAGACTTGTACAAGTTTGATCCTGTCAAATTT  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTGCTTTTCAAGACCAGACTTGTACAAGTTTGATCCTGTCAAATTT  800

seq1  TCGTTAAACACGGGCAATGGGCACCTGATTCTCCATCATTCCTTGAGGGA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCGTTAAACACGGGCAATGGGCACCTGATTCTCCATCATTCCTTGAGGGA  850

seq1  CTATTACATGTTGAAGATTGTTAGGGATAAAGTATGCCCCTACCATAATG  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTACATGTTGAAGATTGTTAGGGATAAAGTATGCCCCTACCATAATG  900

seq1  TACCCACGGTTGCTATGGTGCAGCAAATAACTTCCCACCAAACATGTGCA  950
      ||||||| ||||||||||||||||||||||||||||||||||||||||| 
seq2  TACCCAC-GTTGCTATGGTGCAGCAAATAACTTCCCACCAAACATGTGC-  948

seq1  AGAAGTTCTCGATAAATTTAGTGGGTCACATATACAAGAAGGTCTGAAAG  1000
      ||||| ||||||| ||||||||||||||||||||| || ||||||| |||
seq2  AGAAG-TCTCGAT-AATTTAGTGGGTCACATATAC-AGGAGGTCTG-AAG  994

seq1  TAGAACTTTTTGAGAAGGCTTCTAGTGGAAGATGGAATACATGAGAAATG  1050
      ||| || |||||||||||||||||||||||||||||||||||||||||||
seq2  TAGGAC-TTTTGAGAAGGCTTCTAGTGGAAGATGGAATACATGAGAAATG  1043

seq1  ATAATTGCTAGTGCAAGTAAAAATGAGTAAAATTAATTTTATGAATGG-A  1099
      |||| |||||||||||||  |||||||| ||||||| ||||||||||| |
seq2  ATAA-TGCTAGTGCAAGT--AAATGAGT-AAATTAA-TTTATGAATGGAA  1088

seq1  TTAAACCAAAACAAAGAGTTAAGGAGTCAAAGGATAAGTGACACATTTTT  1149
      |||||||||||| ||||||  ||||||| |||||| ||||| ||||||||
seq2  TTAAACCAAAAC-AAGAGT--AGGAGTC-AAGGAT-AGTGAAACATTTTT  1133

seq1  ATTTAAAAA  1158
      ||| |||||
seq2  ATTAAAAAA  1142