BAC Information

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BAC

Clone NameB6Ng01-137L08
Chromosome16 (Build37)
Map Location 42,024,751 - 42,139,178
singlet/doubletdoublet
Overlap geneLsamp
Upstream geneEG667450
Downstream geneGap43, BC002163
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-137L08.bB6Ng01-137L08.g
ACCDH937151DH937152
length1,1261,166
definitionDH937151|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L08, 5' end.DH937152|Mus musculus domesticus DNA, BAC clone: B6Ng01-137L08, 3' end.
singlet/doubletdoubletdoublet
BLAST hituniqueunique
Map location.(42,138,042 - 42,139,178)(42,024,751 - 42,025,815)
sequence
gaattcagggaggtcagacccactggaactggagttatgatggttgtaag
cttccatgggtatgtgaatactgggaaccaaaccaggattctatataaga
acaataagtatccttagccactgagccaactctccagccccaagaataga
ctcttaataaggaaataaaatataagttaagggaacttgaaaagttagtg
ttgcagatttctgtaaatgtttacagaacattgaaaaaatggtagaacac
atagtgacatagatttgaagatgcaggtctgactttctcctgtgcctcta
ctgttgccatagacacctgtctcagcctcttgcctatgaatacagacaat
gatacctacggatctcgtatacaggtgtaaggcaaatgttgtatgaaatc
agatgtaaagaacactttcagcatctaaagtagctacatcaattgctttt
gcctctactactttcctgggtatgggtagaaagaaatttgagttagacct
tggagtctgaagtttgccattcataagtcctttgactttagtccagagaa
tgtttacattctgtgtatataaaagacagggggtggagagagtatgaaac
tagagacacagtttggggtaagggaggcggtggaatattctggaaggctc
tgggagaggagaatagctatgattaactctataatatgaaattctcaaaa
tataagtgaaaatgttatttggaaaatataagggcagcacttgttgtcat
gaataacttgaggtctcactctacagtgagacattatttccttaaattgc
ttatcagtgacctttgaagcaaagtactgtagagtctagttaaattatac
acttacgttctggaacgtttgccaagaggttaaacatacctgttcctgtt
ctaggggatctttcagctctcagtagccacttggcagctacaactgttag
taactctagaacttaagatcccatgccttctcttggcattgtaggtatcc
ccacacatgtgtatactcaacaggtggtgcatgttgtcagtaacttctgc
ttttttaaactaccacacatgtaagagcttcacgaaattcttgtcaccgg
accctaccatttgttggtgagccatt
gaattcatgtgtatatctgatttgccctgttatgtctgaagatactgttt
cttttgaactctataccacctctggctcttacaaaccttctgccttctct
tctgcataaattcctaagtgttgagggaaaagtttgataaaggcatccca
ttggctcagtgcttgaaagtctctcaatctctgaacattgtttatttgtg
ggtctctgtattacttgtctactgcaagaagattctctgatgtggcctgg
ttgatagcaatatgtcatgtgtattttatatctgtgcttctttagtagaa
taatagtattagcttcccatccccggccaatgacttatctaagatggggg
ttcttagcaactttagcagtgtgttaagtgtagtttcccttgcaggaatt
cctgagtggaccttacatacaatcaaaatgtggttggttactcccataac
atttgtgccaccaatgcaccagtaccttgcagtcaggtcactggagcagg
ttgcaggatttgtaaatggatattagtgattatttttctcctctaatagc
atgcaaatcagtaagggtgaatgccaatcagtaaggatgaggcttctaat
tgggagccaggttaattttttgtttgtttgctttttagatgttttgtcat
gttgccctggaacttgttaggtagaccaggctgcccttaacatcacagcg
gtcatattgccccagttttctgagtgatgggattataggttatatggaat
aaatccaggcgttgtttttttctattttactagaaatatgatcacataac
atgtgtgctttagtatctacatcttccactgggtattaggtatgtatttc
atttaaaaatttatatgtccttctactaatggacagtttgatttttccct
attatctatatctgaggatttcagtacagtattcttagaaatggtagcca
ttctctttataaataaatatttaagacttcataagagatttacttgtgtc
ttaggtttcttaaagaagatattagttatttattaaatatttttgacatt
cttgcctagtatgatatcttttcagaatatgcctatttacacctgagaat
tcagtaatgcttaggtgttccacagattcaagttactgcatgttatggac
gaattcacatatctta
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_42138042_42139178
seq2: B6Ng01-137L08.b_48_1173 (reverse)

seq1  AATGGCTCACCCTATACAAATGGTAGGGGCCCGGTGACAAGGATATCGCT  50
      |||||||||||    |||||||||| ||| ||||||||||| || ||| |
seq2  AATGGCTCACC---AACAAATGGTA-GGGTCCGGTGACAAGAATTTCG-T  45

seq1  GAAGCTCTTACATGTGTGGTAGTTTAGAAAAAGCAGAGGTTACTGAACAA  100
      |||||||||||||||||||||||||| |||||||||| ||||||| ||||
seq2  GAAGCTCTTACATGTGTGGTAGTTTA-AAAAAGCAGAAGTTACTG-ACAA  93

seq1  CATGCACCACCTGTTGAGTATACACATGTGTGGGGATACCTACAATGGCC  150
      |||||||||||||||||||||||||||||||||||||||||||||| |||
seq2  CATGCACCACCTGTTGAGTATACACATGTGTGGGGATACCTACAAT-GCC  142

seq1  AAGAGAAGGCATGGGATCCCTTAAG-TCTAGAGTTACTAACAGTTGTAAG  199
      |||||||||||||||||  |||||| ||||||||||||||||||||| ||
seq2  AAGAGAAGGCATGGGAT--CTTAAGTTCTAGAGTTACTAACAGTTGT-AG  189

seq1  CTGCCAGGTGGCTACTGAGAGCTGAAAGATCCCCTAGAACAGGAACAGGT  249
      |||||| |||||||||||||||||||||||||||||||||||||||||||
seq2  CTGCCAAGTGGCTACTGAGAGCTGAAAGATCCCCTAGAACAGGAACAGGT  239

seq1  ATGTTTAACCTCTTGGCAAACGTTCCAGAACGTAAGTGTATAATTTAACT  299
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATGTTTAACCTCTTGGCAAACGTTCCAGAACGTAAGTGTATAATTTAACT  289

seq1  AGACTCTACAGTACTTTGCTTCAAAGGTCACCTGATAAGCAATTTAAGGA  349
      |||||||||||||||||||||||||||||| |||||||||||||||||||
seq2  AGACTCTACAGTACTTTGCTTCAAAGGTCA-CTGATAAGCAATTTAAGGA  338

seq1  AATAATGTCTCACTGTAGAGTGAGACCTCAAGTTATTCATGACAACAAGT  399
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATAATGTCTCACTGTAGAGTGAGACCTCAAGTTATTCATGACAACAAGT  388

seq1  GCTGCCCTTATATTTTCCAAATAACATTTTCACTTATATTTTGAGAATTT  449
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGCCCTTATATTTTCCAAATAACATTTTCACTTATATTTTGAGAATTT  438

seq1  CATATTATAGAGTTAATCATAGCTATTCTCCTCTCCCAGAGCCTTCCAGA  499
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATATTATAGAGTTAATCATAGCTATTCTCCTCTCCCAGAGCCTTCCAGA  488

seq1  ATATTCCACCGCCTCCCTTACCCCAAACTGTGTCTCTAGTTTCATACTCT  549
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATATTCCACCGCCTCCCTTACCCCAAACTGTGTCTCTAGTTTCATACTCT  538

seq1  CTCCACCCCCTGTCTTTTATATACACAGAATGTAAACATTCTCTGGACTA  599
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTCCACCCCCTGTCTTTTATATACACAGAATGTAAACATTCTCTGGACTA  588

seq1  AAGTCAAAGGACTTATGAATGGCAAACTTCAGACTCCAAGGTCTAACTCA  649
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTCAAAGGACTTATGAATGGCAAACTTCAGACTCCAAGGTCTAACTCA  638

seq1  AATTTCTTTCTACCCATACCCAGGAAAGTAGTAGAGGCAAAAGCAATTGA  699
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTCTTTCTACCCATACCCAGGAAAGTAGTAGAGGCAAAAGCAATTGA  688

seq1  TGTAGCTACTTTAGATGCTGAAAGTGTTCTTTACATCTGATTTCATACAA  749
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGTAGCTACTTTAGATGCTGAAAGTGTTCTTTACATCTGATTTCATACAA  738

seq1  CATTTGCCTTACACCTGTATACGAGATCCGTAGGTATCATTGTCTGTATT  799
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTTGCCTTACACCTGTATACGAGATCCGTAGGTATCATTGTCTGTATT  788

seq1  CATAGGCAAGAGGCTGAGACAGGTGTCTATGGCAACAGTAGAGGCACAGG  849
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATAGGCAAGAGGCTGAGACAGGTGTCTATGGCAACAGTAGAGGCACAGG  838

seq1  AGAAAGTCAGACCTGCATCTTCAAATCTATGTCACTATGTGTTCTACCAT  899
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGTCAGACCTGCATCTTCAAATCTATGTCACTATGTGTTCTACCAT  888

seq1  TTTTTCAATGTTCTGTAAACATTTACAGAAATCTGCAACACTAACTTTTC  949
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTTCAATGTTCTGTAAACATTTACAGAAATCTGCAACACTAACTTTTC  938

seq1  AAGTTCCCTTAACTTATATTTTATTTCCTTATTAAGAGTCTATTCTTGGG  999
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGTTCCCTTAACTTATATTTTATTTCCTTATTAAGAGTCTATTCTTGGG  988

seq1  GCTGGAGAGTTGGCTCAGTGGCTAAGGATACTTATTGTTCTTATATAGAA  1049
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTGGAGAGTTGGCTCAGTGGCTAAGGATACTTATTGTTCTTATATAGAA  1038

seq1  TCCTGGTTTGGTTCCCAGTATTCACATACCCATGGAAGCTTACAACCATC  1099
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTGGTTTGGTTCCCAGTATTCACATACCCATGGAAGCTTACAACCATC  1088

seq1  ATAACTCCAGTTCCAGTGGGTCTGACCTCCCTGAATTC  1137
      ||||||||||||||||||||||||||||||||||||||
seq2  ATAACTCCAGTTCCAGTGGGTCTGACCTCCCTGAATTC  1126

seq1: chr16_42024751_42025815
seq2: B6Ng01-137L08.g_190_1232

seq1  AGGGAAAAGTTTGATAAAGGCATCCCATTGGCTCAGTGCTTGAAAGTCTC  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGGAAAAGTTTGATAAAGGCATCCCATTGGCTCAGTGCTTGAAAGTCTC  50

seq1  TCAATCTCTGAACATTGTTTATTTGTGGGTCTCTGTATTACTTGTCTACT  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCAATCTCTGAACATTGTTTATTTGTGGGTCTCTGTATTACTTGTCTACT  100

seq1  GCAAGAAGATTCTCTGATGTGGCCTGGTTGATAGCAATATGTCATGTGTA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCAAGAAGATTCTCTGATGTGGCCTGGTTGATAGCAATATGTCATGTGTA  150

seq1  TTTTATATCTGTGCTTCTTTAGTAGAATAATAGTATTAGCTTCCCATCCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTTTATATCTGTGCTTCTTTAGTAGAATAATAGTATTAGCTTCCCATCCC  200

seq1  CGGCCAATGACTTATCTAAGATGGGGGTTCTTAGCAACTTTAGCAGTGTG  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGGCCAATGACTTATCTAAGATGGGGGTTCTTAGCAACTTTAGCAGTGTG  250

seq1  TTAAGTGTAGTTTCCCTTGCAGGAATTCCTGAGTGGACCTTACATACAAT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTAAGTGTAGTTTCCCTTGCAGGAATTCCTGAGTGGACCTTACATACAAT  300

seq1  CAAAATGTGGTTGGTTACTCCCATAACATTTGTGCCACCAATGCACCAGT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CAAAATGTGGTTGGTTACTCCCATAACATTTGTGCCACCAATGCACCAGT  350

seq1  ACCTTGCAGTCAGGTCACTGGAGCAGGTTGCAGGATTTGTAAATGGATAT  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ACCTTGCAGTCAGGTCACTGGAGCAGGTTGCAGGATTTGTAAATGGATAT  400

seq1  TAGTGATTATTTTTCTCCTCTAATAGCATGCAAATCAGTAAGGGTGAATG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGTGATTATTTTTCTCCTCTAATAGCATGCAAATCAGTAAGGGTGAATG  450

seq1  CCAATCAGTAAGGATGAGGCTTCTAATTGGGAGCCAGGTTAATTTTTTGT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAATCAGTAAGGATGAGGCTTCTAATTGGGAGCCAGGTTAATTTTTTGT  500

seq1  TTGTTTGCTTTTTAGATGTTTTGTCATGTTGCCCTGGAACTTGTTAGGTA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTGTTTGCTTTTTAGATGTTTTGTCATGTTGCCCTGGAACTTGTTAGGTA  550

seq1  GACCAGGCTGCCCTTAACATCACAGCGGTCATATTGCCCCAGTTTTCTGA  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GACCAGGCTGCCCTTAACATCACAGCGGTCATATTGCCCCAGTTTTCTGA  600

seq1  GTGATGGGATTATAGGTTATATGGAATAAATCCAGGCGTTGTTTTTTTCT  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTGATGGGATTATAGGTTATATGGAATAAATCCAGGCGTTGTTTTTTTCT  650

seq1  ATTTTACTAGAAATATGATCACATAACATGTGTGCTTTAGTATCTACATC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTTACTAGAAATATGATCACATAACATGTGTGCTTTAGTATCTACATC  700

seq1  TTCCACTGGGTATTAGGTATGTATTTCATTTAAAAATTTATATGTCCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCCACTGGGTATTAGGTATGTATTTCATTTAAAAATTTATATGTCCTTC  750

seq1  TACTAATGGACAGTTTTGATTTTTCCCTATTATCTATATCTGAGAATTTC  800
      ||||||||||||| |||||||||||||||||||||||||||||| |||||
seq2  TACTAATGGACAG-TTTGATTTTTCCCTATTATCTATATCTGAGGATTTC  799

seq1  AGTACAGTATTCTTAGAAATGGTAGCCATTCTCTTTATAAATAAATATTT  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTACAGTATTCTTAGAAATGGTAGCCATTCTCTTTATAAATAAATATTT  849

seq1  AAGACTTCATAAGAAGATTTTACTTGTGTCTTAAGTTTCTTAAAG-AGAT  899
      ||||||||||||| ||| ||||||||||||||| ||||||||||| ||||
seq2  AAGACTTCATAAG-AGA-TTTACTTGTGTCTTAGGTTTCTTAAAGAAGAT  897

seq1  ATTAGGTTAATTTTATCTAAATATTTTTGACATTTCTTGTCTAGTTATGA  949
      |||| ||||  ||||| ||||||||||||||| |||||| |||| |||||
seq2  ATTA-GTTA--TTTAT-TAAATATTTTTGACA-TTCTTGCCTAG-TATGA  941

seq1  TAATCCTTTTCTAAAATATAGCTTATTATCACCTGAGATTTAAATTAATT  999
      ||   |||||| | ||||| || ||||  ||||||||| || | | |   
seq2  TA--TCTTTTC-AGAATAT-GCCTATTTACACCTGAGAATTCAGTAA---  984

seq1  TGCTAAAAGTTGTT-CACAGTATCAAGTTACTGCATTGTTAATGGCACTG  1048
      ||||   || |||| |||||  ||||||||||||| |||| |||| || |
seq2  TGCT--TAGGTGTTCCACAGATTCAAGTTACTGCA-TGTT-ATGG-AC-G  1028

seq1  AATTCAACAGTATCTTA  1065
      ||||| ||| |||||||
seq2  AATTC-ACA-TATCTTA  1043