BAC Information

Click to search

BAC

Clone NameB6Ng01-144D21
Chromosome16 (Build37)
Map Location 86,425,891 - 86,426,758
singlet/doubletsinglet
Overlap genenone
Upstream geneCyyr1, LOC100039994, LOC622000, Adamts1, Adamts5, LOC100040025, LOC100039780
Downstream geneN6amt1, Zfp294
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-144D21.b
ACCDH941972
length1,169
definitionDH941972|Mus musculus domesticus DNA, BAC clone: B6Ng01-144D21, 5' end.
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattctaaactctttatgttaggctatatgatagaatactttatctaaa
tttccaaatatgatgggctggacatcacaagtgtacatcataccatataa
tttgcataattgctataattatggtcaatttatatctgagaggaaaaagc
cttttactggactaaaaggggggaatgtagtgggttgacttaatgctgct
tggattctaatgctaatttgggtcctcgaaaactgtttgctccaaagatg
ggtccacacgtaagacactgagggaccctgcccccagtcaattctgattg
gtaaataaaaatgctagcagccaatagctagggataagagacataagcaa
gggttagatttcttgggattaggaccacacagaaaggcaaaaggagcctc
catggaagaggaagagcatgcagaagggagaagaaaaactgtcatgaggt
agctgagccataaaaacatggccaattgtagttaggagcagcccagaaca
tatggatcacagaaatttgtaagtagtaacttagagttatcataggaaag
tggattttaacaccttggaagataaacaggtgttccagctattgtgctgc
ttaaggcatatttaaaaatataaaagttgtatgtgtgtcttttgtcaggg
aacacaaattgtgaaaggttggaagaaaccctgcaccaggatttttaaat
ttatattacgatagtagactgtatttctctggagctgttaagtctgaata
aacctactcactgaggtttggctttgtcaggatatgttatcattgcaaga
agaaagcaactaaggctattctcttaagtattcctacagtagggatggaa
aatgtcacaaaaacaaatttttctatctaaaagggaaacagtgtgaatga
gaatgtagaaaagtagaatctttgcagagtgttcatgggaaatggttcaa
tcactgtgtgaatcattatgacgatgcctcagtcatatgaagatgtcagc
accccatggcatatcctatggttcagtcattctctatagttgtaccaaga
actactaaaacttgtaactataagatatcacatatccatgttgtaaacat
catttgcagtgcaacaaagagaagcaatcttagattcgagagtgcaaaat
gatgtttaagtcgaataaa
quality valuesOpen.




Alignment Information

BAC End 1BAC End 2
seq1: chr16_86425891_86426758
seq2: B6Ng01-144D21.b_361_1216

seq1  CTAGCAGCCAATAGCTAGGGATAAGAGACATAAGCAAGGGTTAGATTTCT  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTAGCAGCCAATAGCTAGGGATAAGAGACATAAGCAAGGGTTAGATTTCT  50

seq1  TGGGATTAGGACCACACAGAAAGGCAAAAGGAGCCTCCATGGAAGAGGAA  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGGGATTAGGACCACACAGAAAGGCAAAAGGAGCCTCCATGGAAGAGGAA  100

seq1  GAGCATGCAGAAGGGAGAAGAAAAACTGTCATGAGGTAGCTGAGCCATAA  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GAGCATGCAGAAGGGAGAAGAAAAACTGTCATGAGGTAGCTGAGCCATAA  150

seq1  AAACATGGCCAATTGTAGTTAGGAGCAGCCCAGAACATATGGATCACAGA  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAACATGGCCAATTGTAGTTAGGAGCAGCCCAGAACATATGGATCACAGA  200

seq1  AATTTGTAAGTAGTAACTTAGAGTTATCATAGGAAAGTGGATTTTAACAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATTTGTAAGTAGTAACTTAGAGTTATCATAGGAAAGTGGATTTTAACAC  250

seq1  CTTGGAAGATAAACAGGTGTTCCAGCTATTGTGCTGCTTAAGGCATATTT  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTTGGAAGATAAACAGGTGTTCCAGCTATTGTGCTGCTTAAGGCATATTT  300

seq1  AAAAATATAAAAGTTGTATGTGTGTCTTTTGTCAGGGAACACAAATTGTG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAATATAAAAGTTGTATGTGTGTCTTTTGTCAGGGAACACAAATTGTG  350

seq1  AAAGGTTGGAAGAAACCCTGCACCAGGATTTTTAAATTTATATTACGATA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAGGTTGGAAGAAACCCTGCACCAGGATTTTTAAATTTATATTACGATA  400

seq1  GTAGACTGTATTTCTCTGGAGCTGTTAAGTCTGAATAAACCTACTCACTG  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTAGACTGTATTTCTCTGGAGCTGTTAAGTCTGAATAAACCTACTCACTG  450

seq1  AGGTTTGGCTTTGTCAGGATATGTTATCATTGCAAGAAGAAAGCAACTAA  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTGGCTTTGTCAGGATATGTTATCATTGCAAGAAGAAAGCAACTAA  500

seq1  GGCTATTCTCTTAAGTATTCCTACAGTAGGGATGGAAAATGTCACAAAAA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCTATTCTCTTAAGTATTCCTACAGTAGGGATGGAAAATGTCACAAAAA  550

seq1  CAAATTTTTCTATCTAAAAAGGGAAACAGTGTGAATGAGAATGTAGAAAA  600
      ||||||||||||||| ||||||||||||||||||||||||||||||||||
seq2  CAAATTTTTCTATCT-AAAAGGGAAACAGTGTGAATGAGAATGTAGAAAA  599

seq1  GTAGAATCTTTGCAGAGTGTTCAT-GGAAATGGTTCAATCACTGTGTGAA  649
      |||||||||||||||||||||||| |||||||||||||||||||||||||
seq2  GTAGAATCTTTGCAGAGTGTTCATGGGAAATGGTTCAATCACTGTGTGAA  649

seq1  TCATTATGACGATGCCTCAGTCATTATGAAGATGTCAGCACCCCATGGCA  699
      ||||||||||||||||||||||| ||||||||||||||||||||||||||
seq2  TCATTATGACGATGCCTCAGTCA-TATGAAGATGTCAGCACCCCATGGCA  698

seq1  TTATCCTATGGTCCAGTCATTCTCTATAAGTTGTACCCAGAACTACTAAA  749
       ||||||||||| |||||||||||||| ||||||||| ||||||||||||
seq2  -TATCCTATGGTTCAGTCATTCTCTAT-AGTTGTACCAAGAACTACTAAA  746

seq1  ACCTGTAACTATAAGGGATATCCACATATCCATGTTGGTAATACCATCAT  799
      || |||||||||||  ||||| |||||||||||||||  ||   ||||||
seq2  ACTTGTAACTATAA--GATAT-CACATATCCATGTTGTAAA---CATCAT  790

seq1  TTGCAGTGGCAACACAGAGAAAGCAATCTTAAGATCCAGAGTGCAATATG  849
      ||||||| |||||| |||| |||||||||||   || ||||||||| |||
seq2  TTGCAGT-GCAACAAAGAG-AAGCAATCTTAGATTCGAGAGTGCAAAATG  838

seq1  ATGTTTATAGTAGAATAAA  868
      ||||||| ||| |||||||
seq2  ATGTTTA-AGTCGAATAAA  856